Gvermi1881.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi1881.t1
Unique NameGvermi1881.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length102
Homology
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR)

HSP 1 Score: 88.6 bits (218), Expect = 2.250e-18
Identity = 53/107 (49.53%), Postives = 67/107 (62.62%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFFHE--EKLHYDLVSADTVDDLLVSDG----DETDTGSFAPITPEAMIRE 101
            M+ T+PS RL+RWRLRL+EFD ++ YKK   N+Q DALSRL T  ETV   DD+IPCF  E  E    +  S D +DD+L  +G    D  D   F  +TPE +IRE
Sbjct:  225 MNVTDPSGRLIRWRLRLSEFDFEIKYKKGKGNSQADALSRLRTAGETVDEIDDEIPCFMAEPAEGTVENEESFDAIDDILALEGGTAPDRLD--QFQAVTPEELIRE 329          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7QA96_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA96_CHOCR)

HSP 1 Score: 81.6 bits (200), Expect = 5.460e-16
Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFFHE--EKLHYDLVSADTVDDLL-VSDGDETDT-GSFAPITPEAMIRE 101
            M+ T+PS RL+RWRLRL+EFD ++ YKK   N+Q DALS+L T  ETV   D++IPCF  E  +    D    + +DD+L + +G  +D    F  +TPE +IR+
Sbjct:  199 MNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSKLRTAGETVDEIDNEIPCFMAEPDDATEDDEEDFERLDDILALEEGATSDCLDHFQAVTPEELIRK 303          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7Q5U0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5U0_CHOCR)

HSP 1 Score: 81.3 bits (199), Expect = 7.950e-16
Identity = 52/109 (47.71%), Postives = 61/109 (55.96%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCF---FHE----EKLHYDLVSADTV--DDLLVSDGDETDTGSFAPITPEAMIR 100
            M  T+PS RLMRWRLRL EFD  V YKK  LNTQ DALSRL T  ET    D++IPCF   F E    +K   D    ++   D +L  +   TD     PIT E M+R
Sbjct:  242 MEITDPSGRLMRWRLRLGEFDFDVKYKKGKLNTQADALSRLFTSGETTVPVDEEIPCFLGRFSEMEPVDKFSDDFEDLESARFDAILTRERYSTDENLLDPITREEMLR 350          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7QL13_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QL13_CHOCR)

HSP 1 Score: 78.6 bits (192), Expect = 6.980e-15
Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFFHE--EKLHYDLVSADTVDDLLVSDG 82
            M+ T+PS RL+RWRLRL EFD ++ YKK   N+Q DALSRL T  ETV   D++IPCF  E  E    D  S D  DD+L  +G
Sbjct:  220 MNVTDPSGRLIRWRLRLPEFDFEIKYKKGKANSQADALSRLRTAGETVDEIDNEIPCFTAEPAEGTVEDEESIDAADDILALEG 303          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7QCX0_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCX0_CHOCR)

HSP 1 Score: 76.6 bits (187), Expect = 3.190e-14
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFFHE--EKLHYDLVSADTVDDLLVSDG 82
            M+ T+PS RL+RWRLRL+EFD ++ YKK   N+Q DALSRL T  ETV   DD+I CF  E  E    D  ++D +DD+L   G
Sbjct:  181 MNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLQTAGETVDEIDDEILCFMAEPAEGTVEDEDNSDALDDILAFKG 264          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7Q800_CHOCR (Integrase catalytic domain-containing protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q800_CHOCR)

HSP 1 Score: 76.3 bits (186), Expect = 4.720e-14
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFFHE 61
            M+ T+PS RL+RWRLRL+EFD ++ YKK   N+Q DALSRL T  ETV   DD+IPCF  E
Sbjct:  200 MNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLRTAGETVEEIDDEIPCFMAE 260          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7QJ39_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ39_CHOCR)

HSP 1 Score: 74.7 bits (182), Expect = 1.650e-13
Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFFHE 61
            M+ T+PS RL+RWRLRL++FD ++ YKK   N+Q DALSRL T  ETV   DD+IPCF  E
Sbjct:  211 MNVTDPSGRLIRWRLRLSKFDFEIKYKKGKANSQADALSRLRTAGETVDEIDDEIPCFIAE 271          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7QU28_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU28_CHOCR)

HSP 1 Score: 73.2 bits (178), Expect = 5.510e-13
Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFFHE 61
            M+ T+PS RL+RWRLRL++FD ++ YKK   N+Q DALSRL T  ETV   DD IPCF  E
Sbjct:  211 MNVTDPSGRLIRWRLRLSKFDFEIKYKKGKANSQADALSRLRTAGETVDEIDDAIPCFMAE 271          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7Q4V7_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4V7_CHOCR)

HSP 1 Score: 70.5 bits (171), Expect = 4.960e-12
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFFHEEKLHYDLVSADTVDDLLVSDG----DETDTGSFAPITPEAMIRE 101
            M+ T+PS RL+RWRLRL+EFD K+ YKK   N+Q DALSRL T  ET            +E++        D +DD+L  +G    D  D   F  +TPE +IRE
Sbjct:  193 MNVTDPSGRLIRWRLRLSEFDFKIKYKKGKANSQADALSRLRTAGET------------NEDRF-------DALDDILALEGGTAPDRFD--QFQAVTPEELIRE 276          
BLAST of Gvermi1881.t1 vs. uniprot
Match: R7QG64_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG64_CHOCR)

HSP 1 Score: 65.5 bits (158), Expect = 2.720e-10
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    1 MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSVDDDDIPCFF 59
            M+ T+PS RL+RWRLRL+EFD ++ YKK   N+Q DALSRL T+  TV    D+IP  F
Sbjct:  176 MNVTDPSGRLIRWRLRLSEFDFEIKYKKGKANSQADALSRLLTQGGTVDEISDEIPLEF 234          
The following BLAST results are available for this feature:
BLAST of Gvermi1881.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
R7QG36_CHOCR2.250e-1849.53Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QA96_CHOCR5.460e-1644.76Integrase catalytic domain-containing protein n=1 ... [more]
R7Q5U0_CHOCR7.950e-1647.71Integrase catalytic domain-containing protein n=1 ... [more]
R7QL13_CHOCR6.980e-1552.38Integrase catalytic domain-containing protein n=2 ... [more]
R7QCX0_CHOCR3.190e-1451.19Integrase catalytic domain-containing protein n=1 ... [more]
R7Q800_CHOCR4.720e-1460.66Integrase catalytic domain-containing protein n=2 ... [more]
R7QJ39_CHOCR1.650e-1359.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QU28_CHOCR5.510e-1359.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q4V7_CHOCR4.960e-1242.86Integrase catalytic domain-containing protein n=1 ... [more]
R7QG64_CHOCR2.720e-1055.93Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1622contigScGOVlb_1622:1186714..1187019 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi1881.t1Gvermi1881.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1622 1186714..1187019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi1881.t1 ID=Gvermi1881.t1|Name=Gvermi1881.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=102bp
MSGTEPSDRLMRWRLRLAEFDCKVSYKKCSLNTQPDALSRLGTEVETVSV
DDDDIPCFFHEEKLHYDLVSADTVDDLLVSDGDETDTGSFAPITPEAMIR
E*
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