Gvermi13962.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13962.t1
Unique NameGvermi13962.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length138
Homology
BLAST of Gvermi13962.t1 vs. uniprot
Match: M2Y395_GALSU (Putative ergosterol biosynthetic protein 28 isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y395_GALSU)

HSP 1 Score: 93.6 bits (231), Expect = 6.680e-22
Identity = 51/113 (45.13%), Postives = 68/113 (60.18%), Query Frame = 0
Query:   14 WVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPAFARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFSILW 126
            WV +TG+AGL A+IGA+  P SP  T+Y  +        +R+YATWLL ST +R  F  +       +V     ATY++A  HF  EIF++ T  L+PGG APL VASFS+ W
Sbjct:    9 WVGLTGLAGLGAAIGAWWNPSSPIDTIYRNISPEMAAPLSRLYATWLLLSTIIRCTFVVSEFHVSLAVV---TMATYVVAWVHFSSEIFIYHTVPLKPGGQAPLWVASFSMGW 118          
BLAST of Gvermi13962.t1 vs. uniprot
Match: M2X1R8_GALSU (Putative ergosterol biosynthetic protein 28 isoform 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X1R8_GALSU)

HSP 1 Score: 90.9 bits (224), Expect = 7.580e-21
Identity = 50/110 (45.45%), Postives = 66/110 (60.00%), Query Frame = 0
Query:   14 WVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPAFARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFS 123
            WV +TG+AGL A+IGA+  P SP  T+Y  +        +R+YATWLL ST +R  F  +       +V     ATY++A  HF  EIF++ T  L+PGG APL VASFS
Sbjct:    9 WVGLTGLAGLGAAIGAWWNPSSPIDTIYRNISPEMAAPLSRLYATWLLLSTIIRCTFVVSEFHVSLAVV---TMATYVVAWVHFSSEIFIYHTVPLKPGGQAPLWVASFS 115          
BLAST of Gvermi13962.t1 vs. uniprot
Match: M1V596_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V596_CYAM1)

HSP 1 Score: 68.2 bits (165), Expect = 1.110e-11
Identity = 44/110 (40.00%), Postives = 56/110 (50.91%), Query Frame = 0
Query:   17 ITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPA-----FARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVAS 121
            +TG   L A+      PL P + LY    S + P        R+YATWLLTS +VR     A  R        LA  TY+IAL HF+ E+F F T +L P G  P++VAS
Sbjct:   14 LTGALALGAAASVLQDPLYPTRVLYTHTTSLSGPRSTAALIGRLYATWLLTSGSVRI---VAAVRYGSVACRLLAALTYVIALAHFYTEVFWFGTLSLHPAGRLPIIVAS 120          
BLAST of Gvermi13962.t1 vs. uniprot
Match: A0A1X7VVV0_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VVV0_AMPQE)

HSP 1 Score: 66.6 bits (161), Expect = 1.700e-11
Identity = 35/113 (30.97%), Postives = 56/113 (49.56%), Query Frame = 0
Query:   14 WVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPAFARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFSILW 126
            WV + G   L+ S+   LK   P   +Y    + A     R++  W L + +VR  F F+          W +F   L+AL+HF  E+FV++TA +  G + PL+++  S LW
Sbjct:    8 WVGLVGATALANSVQCLLKNTFPRDRVYTLESNQASQLAGRLFGIWTLLAASVRIAFAFSSPNSNLYFATWFSF---LLALYHFTSEVFVYKTAPISTGTVLPLIISGLSSLW 117          
BLAST of Gvermi13962.t1 vs. uniprot
Match: UPI0003344137 (probable ergosterol biosynthetic protein 28 n=1 Tax=Condylura cristata TaxID=143302 RepID=UPI0003344137)

HSP 1 Score: 62.8 bits (151), Expect = 7.750e-10
Identity = 38/112 (33.93%), Postives = 58/112 (51.79%), Query Frame = 0
Query:   14 WVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPAFARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFSIL 125
            W+ +  +  L  S+  +      ++ LY   P   +   AR +  W L S+ VRF         +   ++ +   T+L+AL HF  E+F++RTA L  G LAPL+VASFSIL
Sbjct:   11 WLFMVSIITLGNSLQCFRDHAFLYEKLYTGKPDLVNGLHARTFGIWTLLSSVVRF---LCATDIRNKPLYHITLWTFLLALGHFLSELFIYRTATLTIGVLAPLIVASFSIL 119          
BLAST of Gvermi13962.t1 vs. uniprot
Match: UPI00188EDF71 (ergosterol biosynthetic protein 28 homolog n=1 Tax=Talpa occidentalis TaxID=50954 RepID=UPI00188EDF71)

HSP 1 Score: 62.4 bits (150), Expect = 1.090e-9
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 0
Query:   14 WVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPAFARMYATWLLTSTAVR-FGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFSILWFTAVVAGI 134
            W+ +T +  +  S+  +      ++ LY   P   +   AR +  W L S+ VR     +   +    I  W    T+LIAL HF  E+F++RTAAL  G LAP+ VAS SIL   A++AG+
Sbjct:   11 WLFMTSIVAMGTSLQCFRDHTFLYEKLYTGKPDLVNGLHARTFGIWTLLSSVVRCLCAMYIHNKPLYYITLW----TFLIALGHFLSELFIYRTAALTIGVLAPMFVASLSIL---AMLAGL 125          
BLAST of Gvermi13962.t1 vs. uniprot
Match: A0A1X2HSP6_SYNRA (Erg28 like protein-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HSP6_SYNRA)

HSP 1 Score: 60.8 bits (146), Expect = 4.420e-9
Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = 0
Query:   11 MPIWVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPAFARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFSILWFT 128
            +P W+L T   GL  ++  Y+   S  K +Y   P+   P  AR +ATW ++ + +R    +A    +   ++ L   TY+IAL H+ LE+FVF    L    ++P +VA  S++W T
Sbjct:   20 LPKWLLFTTTLGLFNTVQNYMTD-SLTKRVYAGKPNEVSPLAARFFATWTMSVSMIRI---YAAFHLEHKFMYDLGIWTYVIALSHYSLELFVFGGCKLNGPFMSPAIVAVSSLVWMT 133          
BLAST of Gvermi13962.t1 vs. uniprot
Match: A0A3D8Q8L4_9HELO (Putative ERG28 n=1 Tax=Coleophoma cylindrospora TaxID=1849047 RepID=A0A3D8Q8L4_9HELO)

HSP 1 Score: 60.5 bits (145), Expect = 7.260e-9
Identity = 44/135 (32.59%), Postives = 66/135 (48.89%), Query Frame = 0
Query:    4 LSPHSPPMPIWVLITGVAGLSASIGAYLKPLSPHKTLY---------NRVP---STADPAFARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFSILW 126
            L  H   +P W+ +T    +  ++ AY+  LS  + +Y            P   S A P  +R + TW L    VR    +A       +++ LA  TY+IA WHF  E F+F+TA L  G LAP++VA  S++W
Sbjct:   10 LPQHPGLLPQWLALTAFIAIGNAVQAYVT-LSYTRRVYLGPKAAKDGRSTPDATSPATPLSSRTWGTWTLLQGVVRG---YAAYDISNPVMYQLAVITYIIAGWHFLSEWFIFKTARLGEGILAPVLVAVTSLIW 140          
BLAST of Gvermi13962.t1 vs. uniprot
Match: W6MGR8_9ASCO (Uncharacterized protein n=1 Tax=Kuraishia capsulata CBS 1993 TaxID=1382522 RepID=W6MGR8_9ASCO)

HSP 1 Score: 58.2 bits (139), Expect = 4.460e-8
Identity = 38/119 (31.93%), Postives = 57/119 (47.90%), Query Frame = 0
Query:   11 MPIWVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPAFARMYATWLLTSTAVR-FGFFFA--PQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFSILW 126
            +P W++      +  S   Y+  L   + +Y   P       AR + TW L S  +R +G ++   PQ    T+       +Y IA+ HF LE FV++TA    G L PL+VA+ SI W
Sbjct:   16 LPKWLVFISAVSIFNSAQTYISGLELTRRVYENKPLETTGLSARTFGTWTLISAVIRGYGAYYITNPQVYDITL------CSYFIAIAHFGLEWFVYKTAKFGKGLLGPLIVATTSITW 128          
BLAST of Gvermi13962.t1 vs. uniprot
Match: A0A6J3CXW7_AYTFU (probable ergosterol biosynthetic protein 28 n=7 Tax=Anatidae TaxID=8830 RepID=A0A6J3CXW7_AYTFU)

HSP 1 Score: 57.8 bits (138), Expect = 6.380e-8
Identity = 37/112 (33.04%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   14 WVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADPAFARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLEIFVFRTAALRPGGLAPLVVASFSIL 125
            W+L+  V     ++  +       + LY   P   +   AR +  W L S+ VR     A     +T+ +++   T+++AL HF  E+F++ TAAL  G +APL+VASFSIL
Sbjct:   11 WLLMVSVIAAGNALQCFRDHSFVSEKLYTTSPGLVNGLQARTFGVWTLLSSVVRC--LCALDIRNQTL-YYITLFTFVVALAHFLSEVFIYHTAALTMGIMAPLMVASFSIL 119          
The following BLAST results are available for this feature:
BLAST of Gvermi13962.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2Y395_GALSU6.680e-2245.13Putative ergosterol biosynthetic protein 28 isofor... [more]
M2X1R8_GALSU7.580e-2145.45Putative ergosterol biosynthetic protein 28 isofor... [more]
M1V596_CYAM11.110e-1140.00Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A1X7VVV0_AMPQE1.700e-1130.97Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
UPI00033441377.750e-1033.93probable ergosterol biosynthetic protein 28 n=1 Ta... [more]
UPI00188EDF711.090e-934.43ergosterol biosynthetic protein 28 homolog n=1 Tax... [more]
A0A1X2HSP6_SYNRA4.420e-932.20Erg28 like protein-domain-containing protein n=1 T... [more]
A0A3D8Q8L4_9HELO7.260e-932.59Putative ERG28 n=1 Tax=Coleophoma cylindrospora Ta... [more]
W6MGR8_9ASCO4.460e-831.93Uncharacterized protein n=1 Tax=Kuraishia capsulat... [more]
A0A6J3CXW7_AYTFU6.380e-833.04probable ergosterol biosynthetic protein 28 n=7 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005352Erg28PFAMPF03694Erg28coord: 11..124
e-value: 2.1E-20
score: 73.1
IPR005352Erg28PANTHERPTHR15451ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATEDcoord: 8..128
NoneNo IPR availablePANTHERPTHR15451:SF19ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATEDcoord: 8..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..113
NoneNo IPR availableTMHMMTMhelixcoord: 55..74
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_647contigScGOVlb_647:1099269..1099682 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13962.t1Gvermi13962.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_647 1099269..1099682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13962.t1 ID=Gvermi13962.t1|Name=Gvermi13962.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=138bp
MSVLSPHSPPMPIWVLITGVAGLSASIGAYLKPLSPHKTLYNRVPSTADP
AFARMYATWLLTSTAVRFGFFFAPQRGQETIVFWLAFATYLIALWHFFLE
IFVFRTAALRPGGLAPLVVASFSILWFTAVVAGIIES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005352Erg28