Gvermi13853.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13853.t1
Unique NameGvermi13853.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length319
Homology
BLAST of Gvermi13853.t1 vs. uniprot
Match: A0A2V3J359_9FLOR (Putative dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J359_9FLOR)

HSP 1 Score: 390 bits (1001), Expect = 6.890e-133
Identity = 197/307 (64.17%), Postives = 244/307 (79.48%), Query Frame = 0
Query:   12 LSKLEASKRLSSSGLIKLSISDFQDVVEISPRPYSLFVMFSADRNLCEPCGAIAKRLAQIANEYNSLTPSKAASKPVFFSIVKVTLEDREFLMRYGLKHVPVFYHFKSGTSREYPRHLSDQSADNFPFQQVGYGANSMKEFINSRSGSRLRVVRGNYQIPFVQTVKDYMPFILVTVAILAAGVVATGAYKSPMLWFGIVVLIYIFSVGGGHYSWINNTPLASVNSNGDFEFISAGSRTQYVAEGFFVSAMCVSISILVILIQEMPSIIPNKSGQTFLGVFLVVMTAVAIITLVVLYQMKMPQYLHYN 318
            L++LE  +  S SGLI  +I +FQDVVE +PR YSLFVMFSAD +LC+PC +  + +  IA EY +L  SK++SKPVFF++V V   D+EFL+RYGL+HVPVFYHF    S+ YP+ L ++SADN+P Q  G GAN+++EFINSR GSRLRVVRGNYQIPFV+TV+ + PFIL  V  +AA VV TGAYKSPMLWF +V+LIYIFSVGGGHYSWI+N+PLA VN +G  E+I+ GSR+QYVAEGFFVSA CVSISILVIL+QE+PS+IPNK GQT  G+F + +T+VAI  L+ LY  KMPQYL YN
Sbjct:   28 LAQLERRRDRSPSGLIPFNIEEFQDVVEAAPRSYSLFVMFSADSSLCQPCASTKRIIGMIAKEYYALPSSKSSSKPVFFAVVNVKTTDQEFLIRYGLRHVPVFYHFGRSKSKTYPKQLDERSADNYPVQ-AGLGANTLREFINSRCGSRLRVVRGNYQIPFVETVRMFKPFILFGVLAIAAVVVFTGAYKSPMLWFAVVMLIYIFSVGGGHYSWIHNSPLAVVNQHGVTEYIAGGSRSQYVAEGFFVSATCVSISILVILVQELPSVIPNKHGQTAAGLFFLFLTSVAITFLLTLYHSKMPQYLQYN 333          
BLAST of Gvermi13853.t1 vs. uniprot
Match: R7QTT2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTT2_CHOCR)

HSP 1 Score: 314 bits (805), Expect = 4.330e-103
Identity = 161/312 (51.60%), Postives = 222/312 (71.15%), Query Frame = 0
Query:    7 GFANSLSKLEASKRLSSSGLIKLSISDFQDVVEISPRPYSLFVMFSADRNLCEPCGAIAKRLAQIANEYNSLTPSKAASKPVFFSIVKVTLEDREFLMRYGLKHVPVFYHFKSGTSREYPRHLSDQSADNFPFQQVGYGANSMKEFINSRSGSRLRVVRGNYQIPFVQTVKDYMPFILVTVAILAAGVVATGAYKSPMLWFGIVVLIYIFSVGGGHYSWINNTPLASVNSNGDFEFISAGSRTQYVAEGFFVSAMCVSISILVILIQEMPSIIPNKSGQTFLGVFLVVMTAVAIITLVVLYQMKMPQYLHYN 318
            G + SLS+L+  KR S S ++ LSI +F+  VE +PR Y+L VMF+AD ++C+PC  +   + +IA EY  L   K +  PVFF+ +KV+  D+ FL +Y ++HVP+ Y F++G +R +P  L+D S DN+  QQ G   N MK F+N+R+ S L VVR   QIPFV  V+  MP ILV V       VA+GAYK PM+WFG+V+L+YIFSVGGG +SWI+N PLA V+SNG  ++ + GSR+QYV EGFFVS  CVSIS+LVILIQE+P ++P KSGQ+ +G+ +++MT VAI+ L+ LYQ+KMPQYL Y+
Sbjct:   29 GSSASLSQLQTLKRSSHSQVLSLSIGEFEKYVERAPREYTLIVMFTADASMCKPCAPMLLAIEKIAKEYEELPDRKKSRMPVFFASLKVSPNDQAFLAKYSMQHVPILYAFRAGNTRNFPSPLNDNSPDNYQIQQFGILPNQMKNFVNARTSSSLSVVRSG-QIPFVPYVRAVMPIILVFVGFAVFVGVASGAYKRPMVWFGLVMLVYIFSVGGGFFSWIHNQPLAVVDSNGITQYFAEGSRSQYVGEGFFVSVTCVSISVLVILIQELPWVLPYKSGQSAIGLSMIMMTFVAIVALLSLYQIKMPQYLRYS 339          
BLAST of Gvermi13853.t1 vs. uniprot
Match: A0A1X6P5W7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5W7_PORUM)

HSP 1 Score: 151 bits (381), Expect = 2.410e-39
Identity = 103/284 (36.27%), Postives = 148/284 (52.11%), Query Frame = 0
Query:   37 VVEISPRPYSLFVMFSADRNLCEPCGAIAKRLAQIANEYNSLTPSKAASKPVFFSIVKVTLEDREFLMRYGLKHVPVFYHFKSGTSREYPRHLSDQSADNFPFQQVGYGANSMKEFINSRSGSRLRVVRGNYQIPFVQTVKDYMPFILVTVAILAAGVVATGAYKSPMLWFGIVVLIYIFSVGGGHYSWINNTPLASVNSNGDFEFISAGSRTQYVAEGFFVSAMCVSISILVILIQEMPSIIPNKSGQTFLGVFLVVMTAVAI--ITLVVLYQMKMPQYLHYN 318
            V+ +SPRP+SL +   AD   C  C   AK L   A    +  PS   S PV F  VKV+  D+ FL   G+ HVP  YH     S ++P  ++    D  P +     A  ++ ++NS  GSRL V R NY +PFV  +K + P +       AA V  TGA++SP L+F +++ +Y FS+ GGHY+WI+N P A V+ NG   +++ G+R QY AEG   +  CV +  L +++ E+PS +   +G            A+      LV LY  KMP YL Y 
Sbjct:   84 VLSLSPRPFSLVITLLADG--CVACDEAAKLLHASAKALAAGPPSARPSTPVVFGAVKVSSSDKAFLSTTGITHVPKVYHLS--PSVKWPVVMAGGPND-LPAKSELTDA-GVRGWLNSVLGSRLAVRRSNYAVPFVPVIKAFSPLLGAAGIAGAAAVGWTGAWRSPWLYFAMLMGVYTFSLAGGHYAWIHNIPWAVVDGNGVTRYVADGNRAQYGAEGVATATGCVLMGGLWVVVHELPSWLGQGAGSLSRAASWAAALAIWFGWTALVGLYAGKMPGYLTYT 361          
BLAST of Gvermi13853.t1 vs. uniprot
Match: A0A7J6P4B6_PEROL (Aminodeoxychorismate synthase n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6P4B6_PEROL)

HSP 1 Score: 80.9 bits (198), Expect = 3.870e-13
Identity = 56/263 (21.29%), Postives = 126/263 (47.91%), Query Frame = 0
Query:   24 SGLIKLSISDFQDVVEISPRPYSLFVMFSADRNLCEPCGAIAKRLAQIANEYNSL----TPSKAASKPVFFSIVKVTLEDREFLMRYGLKHVPVFYHFKSG---TSREYPRHLSDQSADNFPFQQVGYGANSMKEFINSRSGSRLRVVRGNYQIPFVQTVKDYMPFILVTVAILAAGVVATGAYKSPMLWFGIVVLIYIF-SVGGGHYSWINNTPLASVNSNGDFEFISAGSRTQYVAEGFFVSAMCVSISILVILIQEMPSI 278
            S +I+L+I+ +++     P+PY +F+MF+A+  +C+ C  + +   + +  Y ++    T       PVFF ++     + E    + LK VP+  HF      T ++    L+ ++AD F   +  +    + E++N ++G  +RV +  ++      +   +  +   V ++  G+    + ++  +   +V L   F S+ G  ++ +    +   ++ G+ E+I  G R QY+ EG   S M ++  + +++   +PS+
Sbjct:   45 SAVIRLNITGYKEYALKQPKPYHIFIMFTANSGVCKVCPHLERSFDRASLSYYAVGAHHTADVVDDDPVFFGMIDA-YSNTELQRLHELKAVPLLVHFSHKSQLTKKKKSGTLAIKAADQFRISKYDHTPEDLLEWMNQKTGREVRVFKTPHE-----RLSSALKMLFGAVLLVIVGIFGIYSARTWPITCAVVALCIEFVSMSGIFFNILQGMMMQGKDAQGNPEWIMQGMRGQYLGEGLAASFMMITSGVCMLIAVRLPSV 301          
BLAST of Gvermi13853.t1 vs. uniprot
Match: A0A7J6TQU7_PEROL (Tumor suppressor candidate 3 n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6TQU7_PEROL)

HSP 1 Score: 78.6 bits (192), Expect = 9.290e-13
Identity = 59/268 (22.01%), Postives = 126/268 (47.01%), Query Frame = 0
Query:   24 SGLIKLSISDFQDVVEISPRPYSLFVMFSADRNLCEPCGAIAKRLAQIANEYNSLTPSKAAS-KPVFFSIVKVTLEDREFLMRYGLKHVPVFYHF-----------KSGTSREYPRHLSDQSADNFPFQQVGYGANSMKEFINSRSGSRLRVVRGNYQIPFVQTVKDYMPFILVTVAILAAGVVATGAYKSPMLWFGIVVL-IYIFSVGGGHYSWINNTPLASVNSNGDFEFISAGSRTQYVAEGFFVSAMCVSISILVILIQEMPSI 278
            S +I+L+I+ +++     P+PY +F+MF+A+  +C+ C  + +   + +  Y ++     A   PVFF ++     + E    + LK VP+  HF           KSGT       L+ ++AD F   +  +    + E++N ++G  +RV +  ++      +   +  +   V ++  G+    + ++  +   IV L I   S+ G  ++ +    +   ++ G+ E+I  G R QY+ EG   S + ++  + ++    +PS+
Sbjct:   45 SAVIRLNITGYKEYALKQPKPYHIFIMFTANSGVCKVCPHLERSFDRASLSYYAVGAHHTADDNPVFFGMMDA-YSNTELQRLHELKAVPLLVHFSHKSQLTKKKKKSGT-------LAIKAADQFRISKYDHTPEDLLEWMNQKTGREVRVFKTPHE-----RLSSALKMLFGAVLLVIVGIFGIYSARTWPITCAIVALSIEFVSMSGIFFNILQGMMMQGKDAEGNPEWIMQGMRGQYLGEGLAASFLMITSGVCMLTAVRLPSV 299          
BLAST of Gvermi13853.t1 vs. uniprot
Match: A0A6T6LEW5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6LEW5_9RHOD)

HSP 1 Score: 71.2 bits (173), Expect = 3.040e-10
Identity = 69/289 (23.88%), Postives = 128/289 (44.29%), Query Frame = 0
Query:   10 NSLSKLEASKRLSSSGLIKLSISDFQDVVEISPRPYSLFVMFSADRNLCEPCGAIAKRLAQIANEYNSL--TPSKAAS---KPVFFSIVKVTLEDREFLMRY-------GLKHVPVFYHFKSGTSREYPRHLSDQSADNFPFQQVGYGANSMKEFINSRSGSRL------RVVRGNYQIPFVQTVKDYM----PFILVTVAILAAGVVATGAYKSPMLWFGIVVLIYIFSVGGGHYSWINNTPLASVNSNGDFEFISAGSRTQYVAEGFFVSAMCVSISILVILIQEMP 276
            NSLS +++  +    G+  +S  +F      + R ++ FV+ +++   C  C  + + L  + +    L   P+ AAS   K    +   V++  ++ L+ Y       G+ H P   +         PR      A  FPF+      + + ++++S SG  +      R     + +    T+ + M    PF+L+ V ++    V  G YK P  ++ ++++ Y  S  G  Y  + N P A   +   +E+ISAG R+ YVAEG+  +A  VS  + ++   E P
Sbjct:   26 NSLSAIKSRSQEHGDGIALISFDEFLSFFTSARRDFNAFVLLTSED--CRACAYVLQNLEPLFDSLTKLRQNPALAASQSAKEALRTYAVVSMISKQDLVTYRSQLQAMGITHSPFLIYIPKSQPIP-PRAGQFPEALTFPFRSQMPETDILSDWMSSASGFSVLGKQSARFGPSFFGVTSYPTLAEVMTKLQPFLLILVPLVFLLAVIFGWYKLPQFYYTLMLVFYAMSTSGLFYVILRNPPFAVWRTT-QWEWISAGLRSMYVAEGWVAAAGYVSCGLCLVAAVEGP 310          
The following BLAST results are available for this feature:
BLAST of Gvermi13853.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J359_9FLOR6.890e-13364.17Putative dolichyl-diphosphooligosaccharide--protei... [more]
R7QTT2_CHOCR4.330e-10351.60Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P5W7_PORUM2.410e-3936.27Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J6P4B6_PEROL3.870e-1321.29Aminodeoxychorismate synthase n=2 Tax=Perkinsus ol... [more]
A0A7J6TQU7_PEROL9.290e-1322.01Tumor suppressor candidate 3 n=5 Tax=Perkinsus ols... [more]
A0A6T6LEW5_9RHOD3.040e-1023.88Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021149Oligosaccharyl transferase complex, subunit OST3/OST6PFAMPF04756OST3_OST6coord: 19..314
e-value: 1.0E-47
score: 162.9
IPR021149Oligosaccharyl transferase complex, subunit OST3/OST6PANTHERPTHR12692DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATEDcoord: 11..311
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 9..179
e-value: 3.8E-19
score: 71.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 205..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 287..309
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..204
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 310..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 276..286
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 227..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..198
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..178
NoneNo IPR availableCDDcd02947TRX_familycoord: 32..120
e-value: 2.26936E-7
score: 46.0121
NoneNo IPR availableTMHMMTMhelixcoord: 288..307
NoneNo IPR availableTMHMMTMhelixcoord: 181..200
NoneNo IPR availableTMHMMTMhelixcoord: 251..273
NoneNo IPR availableTMHMMTMhelixcoord: 204..226
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 20..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_647contigScGOVlb_647:379511..380559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13853.t1Gvermi13853.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_647 379511..380559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13853.t1 ID=Gvermi13853.t1|Name=Gvermi13853.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=319bp
MISADKGFANSLSKLEASKRLSSSGLIKLSISDFQDVVEISPRPYSLFVM
FSADRNLCEPCGAIAKRLAQIANEYNSLTPSKAASKPVFFSIVKVTLEDR
EFLMRYGLKHVPVFYHFKSGTSREYPRHLSDQSADNFPFQQVGYGANSMK
EFINSRSGSRLRVVRGNYQIPFVQTVKDYMPFILVTVAILAAGVVATGAY
KSPMLWFGIVVLIYIFSVGGGHYSWINNTPLASVNSNGDFEFISAGSRTQ
YVAEGFFVSAMCVSISILVILIQEMPSIIPNKSGQTFLGVFLVVMTAVAI
ITLVVLYQMKMPQYLHYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021149OligosaccharylTrfase_OST3/OST6
IPR036249Thioredoxin-like_sf