Gvermi12926.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12926.t1
Unique NameGvermi12926.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length189
Homology
BLAST of Gvermi12926.t1 vs. uniprot
Match: A0A2V3ITX4_9FLOR (Berberine bridge enzyme-like 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITX4_9FLOR)

HSP 1 Score: 275 bits (703), Expect = 9.380e-88
Identity = 126/187 (67.38%), Postives = 146/187 (78.07%), Query Frame = 0
Query:    1 MSKVSNALDVHAFFGPDGGWGERRASNVYKAMMQQRGTQGSDANDRIYQSTFMARSGGKAPSRKFWQKYVDFCQTAYGRRSIPWVVCEMNLFNNAINRRRNNAFAFRGANLITHYIVGGGTAAHKKFVYYWMKRHLAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIP 187
            +S V NALDVHAFFGP+GGWG+ RA N+ KAM+ QR TQG  AN RIYQSTF+  +    PS+KFWQ YVDFCQ+AYGR SIPWVVCEMNLFNNAI+   NNAFAFR ANLIT+YIVGGG   HKKFVYYWM+ H  P+T GVY+NY +  L  YA  YWG +L RLR+V++R+DP YFFMN Q IP
Sbjct:  312 ISYVRNALDVHAFFGPEGGWGQYRAPNLRKAMLNQRFTQGEHANGRIYQSTFLRFNATHEPSKKFWQTYVDFCQSAYGRNSIPWVVCEMNLFNNAIDLPNNNAFAFRSANLITNYIVGGGRREHKKFVYYWMRNHFEPYTVGVYINYADLLLKKYATAYWGSSLRRLRRVQKRWDPSYFFMNPQPIP 498          
BLAST of Gvermi12926.t1 vs. uniprot
Match: A0A2V3J4D0_9FLOR (Berberine bridge enzyme-like 22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4D0_9FLOR)

HSP 1 Score: 267 bits (683), Expect = 1.050e-84
Identity = 121/188 (64.36%), Postives = 151/188 (80.32%), Query Frame = 0
Query:    1 MSKVSNALDVHAFFGPDGGWGERRASNVYKAMMQQRGTQGSDANDRIYQSTFMARSGGKAPSRKFWQKYVDFCQTAYGRRSIPWVVCEMNLFNNAINRRRNNAFAFRGANLITHYIVGGGTAAHKKFVYYWMKRHLAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIPT 188
            +S V NALD+HAFFGP GGWG  RA+N+Y+AM+QQRGT+   AN+RIYQSTF+  +    PSR+FWQ+YV+FCQ+A+G RS+PWVVCE+NLFNNAI+R++NNAF FR ANLITH+IVGGG++   +FVY  MK++L PFT GVYVNYPE  L NYA+ YWG NL  L++VK+ YDP  FFMN Q IP 
Sbjct:  316 ISTVRNALDLHAFFGPKGGWGSYRANNLYEAMLQQRGTESGQANERIYQSTFLRSADKTGPSRQFWQQYVNFCQSAFGARSVPWVVCELNLFNNAIDRKQNNAFPFRQANLITHFIVGGGSSRDTRFVYNRMKKYLRPFTIGVYVNYPELFLENYAKSYWGANLGWLKRVKKLYDPRNFFMNPQPIPA 503          
BLAST of Gvermi12926.t1 vs. uniprot
Match: A0A2V3ILB0_9FLOR (Berberine bridge enzyme-like 23 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILB0_9FLOR)

HSP 1 Score: 229 bits (583), Expect = 3.090e-69
Identity = 106/183 (57.92%), Postives = 132/183 (72.13%), Query Frame = 0
Query:    6 NALDVHAFFGPDGGWGERRASNVYKAMMQQRGTQGSDANDRIYQSTFMARSGGKAPSRKFWQKYVDFCQTAYGRRSIPWVVCEMNLFNNAINRRRNNAFAFRGANLITHYIVGGGTAAHKKFVYYWMKRHLAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIPT 188
            NALDVHAFFGP+G WG  RA ++ KA+  Q+    +  NDR+YQSTF+    G AP   FWQ+Y +FC    G R + +VVCEMNLFNNAI+RRRNN+FA R A LITHYI+GGG+   +  +Y WM+RHLA +T+GVYVNYPE  L  YA  YWG +L RL+++KRRYDP  FF+NAQ IP 
Sbjct:  373 NALDVHAFFGPEGRWGRERAVDISKALRVQKYRGANAGNDRLYQSTFLKWGPGHAPPVWFWQRYAEFCGRPVGGRGVEFVVCEMNLFNNAIDRRRNNSFAHREARLITHYIIGGGSVEEQVRLYEWMRRHLAAYTSGVYVNYPELRLRRYASAYWGSSLQRLQRLKRRYDPYLFFLNAQPIPV 555          
BLAST of Gvermi12926.t1 vs. uniprot
Match: R7QMI5_CHOCR (BBE domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMI5_CHOCR)

HSP 1 Score: 92.4 bits (228), Expect = 1.490e-21
Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 0
Query:  127 FVYYWMKRHLAPFTTGVYVNYPERELS-NYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIP 187
            F Y WM+RHLAPFT+GVYVNY EREL  +YA+MYWG++L RL+K+KR YDP  FF N Q IP
Sbjct:    2 FAYGWMRRHLAPFTSGVYVNYSERELGGSYAKMYWGKSLQRLKKIKRTYDPEGFFANPQPIP 63          
BLAST of Gvermi12926.t1 vs. uniprot
Match: A0A1E1VTJ4_9BACL (FAD/FMN-dependent dehydrogenase n=1 Tax=Paenibacillus sp. NAIST15-1 TaxID=1605994 RepID=A0A1E1VTJ4_9BACL)

HSP 1 Score: 66.2 bits (160), Expect = 2.780e-10
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0
Query:  131 WMKRH---LAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIPT 188
            W+KR    L PF  G YVN+P+ ++ N+ + Y+G N PRL++VKR+YDP   F  AQSIP 
Sbjct:  110 WVKRFRKALRPFVVGDYVNFPDLQIKNWPKAYYGVNFPRLKQVKRKYDPHNVFRFAQSIPV 170          
BLAST of Gvermi12926.t1 vs. uniprot
Match: A0A3M8DV84_9BACL (FAD-binding oxidoreductase n=1 Tax=Brevibacillus fluminis TaxID=511487 RepID=A0A3M8DV84_9BACL)

HSP 1 Score: 67.8 bits (164), Expect = 5.780e-10
Identity = 34/93 (36.56%), Postives = 52/93 (55.91%), Query Frame = 0
Query:   98 RRRNNAFAFRGANLITHYIVGGGTAAHKKFVYYWMK---RHLAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIP 187
            R    A+ +R A +   Y+        ++    W++   + L+P+TTG YVN+P+R + N+ + Y+G N PRLR+VK  YDP   F   QSIP
Sbjct:  351 RPEETAYFYRDAIIAQEYLTKWNNPGEERQNVRWIRNVRQALSPYTTGDYVNWPDRFIRNWPKAYYGENFPRLREVKTAYDPTNLFRFPQSIP 443          
BLAST of Gvermi12926.t1 vs. uniprot
Match: UPI00156A1879 (FAD-binding oxidoreductase n=1 Tax=Nonomuraea antri TaxID=2730852 RepID=UPI00156A1879)

HSP 1 Score: 67.8 bits (164), Expect = 5.780e-10
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   82 IPWVVCEMNLFNNAINRRRNNAFAF--RGAN-LITHYIVGGGTAAHKKFV--YYWMKR---HLAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSI 186
            +PW          AI R   +A AF  RG   L+   +  G  AA ++ +  + W++R   HL+P+  GVY NYP+ +L+++A+ Y+G NLPRLR++K  +DPG  F +AQ++
Sbjct:  343 VPW--------GGAIGRVAPDATAFVHRGPRFLLKQSVQVGFRAADERRLDAHAWLRRSWAHLSPWAGGVYPNYPDADLTDWARAYYGGNLPRLRRLKAAHDPGGVFRHAQTL 447          
BLAST of Gvermi12926.t1 vs. uniprot
Match: A0A6P1AXP8_9BACT (FAD-binding oxidoreductase n=1 Tax=bacterium LRH843 TaxID=2681972 RepID=A0A6P1AXP8_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 1.060e-9
Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 0
Query:   99 RRNNAFAFRGANLITHYIVGGGTAAHKKFVYYW---MKRHLAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIP 187
            R   AF +R   +   Y+      + K+    W   ++  L+P+TTG YVN+P+R + N+   Y+G+N  RLR+VK  YDP   F   QSIP
Sbjct:  352 RNETAFYYRDVEIAQEYLATWNEPSEKRENIRWIEELRNALSPYTTGDYVNWPDRLIENWLSAYYGKNARRLREVKTAYDPFNVFKFPQSIP 443          
BLAST of Gvermi12926.t1 vs. uniprot
Match: A0A3Q9ICN7_9BACL (FAD-binding oxidoreductase n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A3Q9ICN7_9BACL)

HSP 1 Score: 66.2 bits (160), Expect = 1.970e-9
Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 0
Query:   71 DFCQTAYGRRSIPWVVCE-MNLFNNAINRRRNNAFAF--RGANLITHYIVGGGTAAHKKFVYYWMKRH---LAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIPT 188
            DF   A  + S  W  C+ +    +A++R    A A+  R A  I            ++    W+KR    L PF  G YVN+P+  + N+ + Y+G N PRL++VKR+YDP   F  AQSIP 
Sbjct:  332 DFLSHAPNKHSTVW--CQSLGGTGSAVSRVSPTATAYPHRKAETIYELSARWRNNGEQQRNIQWVKRFRRALRPFVVGDYVNFPDLRIKNWPKAYYGVNFPRLKRVKRKYDPHNVFRFAQSIPV 453          
BLAST of Gvermi12926.t1 vs. uniprot
Match: UPI000934058C (FAD-binding oxidoreductase n=1 Tax=Paenibacillus sp. NAIST15-1 TaxID=1605994 RepID=UPI000934058C)

HSP 1 Score: 66.2 bits (160), Expect = 1.980e-9
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0
Query:  131 WMKRH---LAPFTTGVYVNYPERELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIPT 188
            W+KR    L PF  G YVN+P+ ++ N+ + Y+G N PRL++VKR+YDP   F  AQSIP 
Sbjct:  393 WVKRFRKALRPFVVGDYVNFPDLQIKNWPKAYYGVNFPRLKQVKRKYDPHNVFRFAQSIPV 453          
The following BLAST results are available for this feature:
BLAST of Gvermi12926.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITX4_9FLOR9.380e-8867.38Berberine bridge enzyme-like 7 n=1 Tax=Gracilariop... [more]
A0A2V3J4D0_9FLOR1.050e-8464.36Berberine bridge enzyme-like 22 n=1 Tax=Gracilario... [more]
A0A2V3ILB0_9FLOR3.090e-6957.92Berberine bridge enzyme-like 23 n=1 Tax=Gracilario... [more]
R7QMI5_CHOCR1.490e-2167.74BBE domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A1E1VTJ4_9BACL2.780e-1049.18FAD/FMN-dependent dehydrogenase n=1 Tax=Paenibacil... [more]
A0A3M8DV84_9BACL5.780e-1036.56FAD-binding oxidoreductase n=1 Tax=Brevibacillus f... [more]
UPI00156A18795.780e-1037.17FAD-binding oxidoreductase n=1 Tax=Nonomuraea antr... [more]
A0A6P1AXP8_9BACT1.060e-936.96FAD-binding oxidoreductase n=1 Tax=bacterium LRH84... [more]
A0A3Q9ICN7_9BACL1.970e-934.68FAD-binding oxidoreductase n=2 Tax=Paenibacillus T... [more]
UPI000934058C1.980e-949.18FAD-binding oxidoreductase n=1 Tax=Paenibacillus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016169FAD-binding, type PCMH, subdomain 2GENE3D3.30.465.10coord: 156..186
e-value: 4.5E-19
score: 71.0
IPR012951Berberine/berberine-likePFAMPF08031BBEcoord: 143..187
e-value: 6.7E-16
score: 58.1
NoneNo IPR availableGENE3D3.40.462.20coord: 37..155
e-value: 4.5E-19
score: 71.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2139775..2140341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12926.t1Gvermi12926.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2139775..2140341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12926.t1 ID=Gvermi12926.t1|Name=Gvermi12926.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=189bp
MSKVSNALDVHAFFGPDGGWGERRASNVYKAMMQQRGTQGSDANDRIYQS
TFMARSGGKAPSRKFWQKYVDFCQTAYGRRSIPWVVCEMNLFNNAINRRR
NNAFAFRGANLITHYIVGGGTAAHKKFVYYWMKRHLAPFTTGVYVNYPER
ELSNYAQMYWGRNLPRLRKVKRRYDPGYFFMNAQSIPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016169FAD-bd_PCMH_sub2
IPR012951BBE