Gvermi12919.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12919.t1
Unique Name	Gvermi12919.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	480

Homology

[Close]

BLAST of Gvermi12919.t1 vs. uniprot
Match: A0A2V3ITY6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITY6_9FLOR)

HSP 1 Score: 293 bits (751), Expect = 1.530e-86
Identity = 206/442 (46.61%), Postives = 261/442 (59.05%), Query Frame = 0

Query:   24 QHVFSSPTNVNLESTPPQSAQPNELHLQSSSWYDRPDTELNASQGKLHQFSAECTSS----SDA-TAWDRLQLLGRLHGSQSSLQSSTSSDHRSSEPQLTSAEKHHAKLRAYTL--SDEYASSDMDAVSAKDVREGHES----DEHQYSQLVARVSAAERQSANRSFRSLLNAESQGP-SSSDLREPLEGSNTSLGSDMVDSFVRKVRSVRTSDSTLMTHFREGISFPSIRIDEEGDGMEAGMFDILKELSDHVNVQERKESNKCLKDKCARPANYVADVRAENGTRSLERKLSAEPAPLTTSSLRNVPRVGFRNYSDAFMTDPLPVRRDRTTKGIVPAVGAAELNSENVGSLVSDDVAAAFKMYDSRSEMTPY-APSLQSDLSSDAKGPVVDVDSPPRWDERRAGSH-------IHDEYEAYDELVVAEYQVEERVEEEHS 445
            QH   SP      S+P +S     L LQ+  WYDRPDT+LNAS  KLH F++    S    SD  +A DRLQL   +  S SSL SS SSDHRS  P ++S + H  +  + TL  +DEYASS++D + +   RE   S    D+H YSQ +AR +A ER + NR+ R L + +SQGP SS DLREPLEGS  SLGSD+VDS +++V SVRTSDS   +H R+G+SFPSIRIDEE +  E+G+FD+L+ELSD + + ER+ S K  +    R   +  D R   G RSLER  S E  PL +SS  N+   G              VR+DRTTK I+P +    +     GS +SDD     + +  +SE T   APSLQSDLSSD    VVDV SP     +R  SH       + DEYEAYD+ VVAEYQVEE VEE  S
Sbjct:  310 QHATQSP------SSPHES-----LKLQTPLWYDRPDTDLNASHHKLHNFTSSIPDSPPHPSDIQSASDRLQLFAAIQSSHSSLHSSASSDHRSPLPFVSSPD-HPQRSSSATLLLNDEYASSELDVLCSPPSREDKLSRQLDDQHHYSQFLARATAMERNALNRAQRGLRSPDSQGPPSSGDLREPLEGSAASLGSDVVDSVLKRVGSVRTSDSNAGSHLRDGVSFPSIRIDEENEHRESGVFDVLRELSDQIYLYERRSSRKSDRSGSGRALGFSTDARVPRGVRSLERNPSIESIPLKSSSGTNIGSAG--------------VRKDRTTKSIIPELDG--VIKAKPGSSLSDDSPLFVRNHSVQSETTGICAPSLQSDLSSDVDATVVDVASP----NQRRTSHNPQMSARVRDEYEAYDDFVVAEYQVEESVEERQS 719

The following BLAST results are available for this feature:

BLAST of Gvermi12919.t1 vs. uniprot

BLAST of Gvermi12919.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ITY6_9FLOR	1.530e-86	46.61	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..203

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_425	contig	ScGOVlb_425:2082453..2085070 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12919.t1	Gvermi12919.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_425 2082453..2085070 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12919.t1 ID=Gvermi12919.t1|Name=Gvermi12919.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=480bp
LCDARKPHTHTDASDVIRLPHILQHVFSSPTNVNLESTPPQSAQPNELHL
QSSSWYDRPDTELNASQGKLHQFSAECTSSSDATAWDRLQLLGRLHGSQS
SLQSSTSSDHRSSEPQLTSAEKHHAKLRAYTLSDEYASSDMDAVSAKDVR
EGHESDEHQYSQLVARVSAAERQSANRSFRSLLNAESQGPSSSDLREPLE
GSNTSLGSDMVDSFVRKVRSVRTSDSTLMTHFREGISFPSIRIDEEGDGM
EAGMFDILKELSDHVNVQERKESNKCLKDKCARPANYVADVRAENGTRSL
ERKLSAEPAPLTTSSLRNVPRVGFRNYSDAFMTDPLPVRRDRTTKGIVPA
VGAAELNSENVGSLVSDDVAAAFKMYDSRSEMTPYAPSLQSDLSSDAKGP
VVDVDSPPRWDERRAGSHIHDEYEAYDELVVAEYQVEERVEEEHSGLFGA
RAVNTPACQAQLCALAEHESRQRKCLILL*