Gvermi12882.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12882.t1
Unique NameGvermi12882.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length423
Homology
BLAST of Gvermi12882.t1 vs. uniprot
Match: A0A1X6P235_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P235_PORUM)

HSP 1 Score: 275 bits (702), Expect = 4.910e-85
Identity = 124/215 (57.67%), Postives = 156/215 (72.56%), Query Frame = 0
Query:  214 PGAGENFWQWFQETKETE---GTTNVSCPP-DRERVCLMFYKFIKKYKIRSVYDVSCAQNLEWVPDVVRKAGKELWGFKYYC---NAPDAKDLERAKEKLSGLSYVQFAPDLWWRTGFAEDTQLLFAWDLLPHIAYGRIWSFFVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTEPGETEKRQLLFYETDMLPDNL 421
            PG  ENFW+WFQ+TK  E    +  V CPP D  R+C  FYK+++KYKIR+V D SC  N+ W+P V+R+ G ELWGF+YYC    A      E AK  LS   +V+F    WW  GF +   L+F WD+LPH AYGR+WSFFV ++   +KYLLFDNYPG++N+PSPKR+++N+RKHPF+FPAAKEVVQNVTEPGE  KRQLLFYETD LP++L
Sbjct:  199 PGHDENFWKWFQQTKGAEHKDASKAVRCPPGDTHRLCETFYKYLRKYKIRTVLDASCGANVAWMPAVLRQVGSELWGFRYYCMHAGAGAEDGAEAAKVALSPFPFVEFVRSEWWHGGFPDGLDLVFCWDVLPHTAYGRVWSFFVLARKHGVKYLLFDNYPGLLNNPSPKRKFINVRKHPFKFPAAKEVVQNVTEPGEHIKRQLLFYETDALPEHL 413          
BLAST of Gvermi12882.t1 vs. uniprot
Match: R7QHX1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHX1_CHOCR)

HSP 1 Score: 245 bits (625), Expect = 4.460e-73
Identity = 100/164 (60.98%), Postives = 135/164 (82.32%), Query Frame = 0
Query:  212 ADPGAGENFWQWFQETKETEG---TTNVSCPPDRERVCLMFYKFIKKYKIRSVYDVSCAQNLEWVPDVVRKAGKELWGFKYYCNAPDAKDLERAKEKLSGLSYVQFAPDLWWRTGFAEDTQLLFAWDLLPHIAYGRIWSFFVKSKAQNIKYLLFDNYPGIMNDP 372
            A+PGAGENFWQWFQETK +E    + ++SCP + ER+C M YK+++KYKIR+++D SCA N +W+P+V+RK+G ELWGFKYYC+ P  + L+  KEK + L++V++APD+WWR G+ +DT+LLFAWD LPHIAYGR+W+FFVK+K Q IKY+L DNYPG+ NDP
Sbjct:  278 AEPGAGENFWQWFQETKGSEKGPVSGSISCPEETERLCQMTYKYLRKYKIRTIFDASCANNGDWMPEVLRKSGNELWGFKYYCSVPKDEQLDYVKEKFASLNFVEYAPDVWWRDGYPDDTELLFAWDTLPHIAYGRVWNFFVKAKKQEIKYILVDNYPGMTNDP 441          
BLAST of Gvermi12882.t1 vs. uniprot
Match: A0A7S1EPQ2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPQ2_9RHOD)

HSP 1 Score: 180 bits (457), Expect = 6.200e-50
Identity = 86/216 (39.81%), Postives = 128/216 (59.26%), Query Frame = 0
Query:  219 NFWQWFQETKETEGTTN----VSCP---PDRERVCLMFYKFIKKYKIRSVYDVSCAQNLEWVPDVVRKAGKELWGFKYYCNAPDAKDLERAK--EKLSGLSY-VQFAPDLWWRT---GFAEDTQLLFAWDLLPHIAYGRIWSFFVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTEPGETE---KRQLLFYETDMLP 418
            +F  WF+   E E        + CP   PD   +C   ++ ++KYK+R V DV+C +   W P V+ K   E WGFKY C  PD +++++ K  ++L  +   V +   +WW+    G   + +  FAWD L H +YGR+WSFF  S++   KY LFDNYP + NDPSPKR+++N+R+HPF+F AAK+ +QNVT+  E     KRQL+ Y  + +P
Sbjct:   90 DFLNWFKSQSEREQNATERGKIECPEKHPDGI-LCKTLFRLLRKYKVRIVVDVACHKTASWTPLVIEKLAAEYWGFKYICVLPDKEEMDKLKASKQLERVEQNVNYIEGMWWKPLDFGGQLNAEFYFAWDTLCHTSYGRVWSFFSSSQSSGAKYYLFDNYPALSNDPSPKREFINVRRHPFKFGAAKDTIQNVTDVDENPDDVKRQLVMYTAETIP 304          
BLAST of Gvermi12882.t1 vs. uniprot
Match: A0A5J4Z4G3_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4G3_PORPP)

HSP 1 Score: 131 bits (330), Expect = 8.810e-31
Identity = 67/200 (33.50%), Postives = 102/200 (51.00%), Query Frame = 0
Query:  229 ETEGTTNVSCPPD-RERVCLMFYKFIKKYKIRSVYDVSCAQNLEWVPDVVRKAGKELWGFKYYCNAPDAKDLERAKEKLS-----GLSYVQFAPDLWWRTGFAEDTQLLFAWDLLPHIAYGRIWSFFVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTEPGETEKRQLLFYETDMLPDNLQ 422
            E E      C  D  E++C  FY+ ++KYK+  V DVSC +   ++  V+R A K  +  +Y C +    +LE+ ++        G + V++    WW+  F     LL AWD+L H AYGR+W FF  +    +K +LFDNY    N  SP R+ +N+R+ PF+F     +   +T       RQL  Y  D L D+L+
Sbjct:  180 EDESFERPDCKKDVNEKLCRKFYRVMRKYKVARVLDVSCIKTAMYMAPVLRLAAKHTYRLEYICASSHDSELEKVRDDADLLADVGQAEVKYMNLQWWKEPFPPQVDLLIAWDVLAHAAYGRVWRFFENALECEVKMVLFDNYVQESNSWSPSRKTINVRRAPFKFEKPTLIFNEMTSEVIESTRQLTVYSLDALRDSLK 379          
BLAST of Gvermi12882.t1 vs. uniprot
Match: A0A1X6NN90_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NN90_PORUM)

HSP 1 Score: 112 bits (281), Expect = 5.190e-25
Identity = 46/73 (63.01%), Postives = 61/73 (83.56%), Query Frame = 0
Query:  330 LLFAWDLLPHIAYGRIWSFFVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTEPG 402
            L+FAWD+L H  YGR+W FFV+++ + +  +LFDNYPG++N+PSPKR+YLN+RKHPF+F  A EVVQNVTE G
Sbjct:   96 LVFAWDVLAHTPYGRVWGFFVRARQEGVGLVLFDNYPGLVNNPSPKRRYLNVRKHPFKFGPAAEVVQNVTEGG 168          
The following BLAST results are available for this feature:
BLAST of Gvermi12882.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1X6P235_PORUM4.910e-8557.67Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QHX1_CHOCR4.460e-7360.98Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1EPQ2_9RHOD6.200e-5039.81Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z4G3_PORPP8.810e-3133.50Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A1X6NN90_PORUM5.190e-2563.01Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..422
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 31..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 43..54
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1914720..1916069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12882.t1Gvermi12882.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1914720..1916069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12882.t1 ID=Gvermi12882.t1|Name=Gvermi12882.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=423bp
MASSLDAMSSTRSRRRRFAKLRRQRSNAPRALAAALFFFLLCYEMVVLRP
PVVPKPPVSGRGAAPPSPPAPVAAVPPTHPPRPTQSSSMPSESAVGSHQA
SPNPHIVAKAAVSPSSISTRLAELQKISSYTSPPSTSHSLRAVADGEQAS
PSPSFHPLRKRNSHTSHPVSSSLAQMEKLAADRGDDQDDAKSKPRSPSEQ
SDRTLSKSEHRADPGAGENFWQWFQETKETEGTTNVSCPPDRERVCLMFY
KFIKKYKIRSVYDVSCAQNLEWVPDVVRKAGKELWGFKYYCNAPDAKDLE
RAKEKLSGLSYVQFAPDLWWRTGFAEDTQLLFAWDLLPHIAYGRIWSFFV
KSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTE
PGETEKRQLLFYETDMLPDNLQ*
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