Gvermi12765.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12765.t1
Unique NameGvermi12765.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length482
Homology
BLAST of Gvermi12765.t1 vs. uniprot
Match: A0A2V3ILG6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG6_9FLOR)

HSP 1 Score: 255 bits (652), Expect = 1.550e-75
Identity = 163/434 (37.56%), Postives = 245/434 (56.45%), Query Frame = 0
Query:    1 MRLSHWRWLGPVPAAFVLQAVFGLQFANGVFASFVADPVLTQALGLAALFVSLGITAFGVLLYYASDHSKYH--SLPRAVAVLGSLAVAAQVLVSYGLLNGSRAVVYAASILQGTGAGCIYVVSIVVVQDWVPESPALATGLSLLFGGAGSLFGIYAFQALVHAMGDALPAMAVASLGAGLVSVTASMFIERPPDRWCPVAEIFDPLTTMTLKDAHSARGAKRVDEQSICYSAIVDFGDDDVCHHKQNKSECGSARLSCYDIVVDPAFALVFVCVFVAAGPGYGFVLSYPLMLHSLFHMPLVDANQMLCYATFFGVVGRLALGVAIDTLSSKCSADEGAAASIRGSKTTNCFILLLQTAALALMPAAIRWHSAWLFHAAVFGVFVAFNGGAVVSACLARDVFAPDNSTLAFALLGVAVGVARALFSVVLAACAD 432
            + L  +R++ PVPA F+LQA+FGL +A GVF + V  P  T A+GLA+ FVS+GIT  GV +   +  S  H  S P   A+ GS+ ++ Q +++  L   +  ++YAAS+L GTG GCIYV S+ V+Q WVPES    TG+ +L G AGSLFGIY ++ALV A+G  +PAMA     +  +S  A+  +++PP  W P  ++              A G    DE++     ++        H   +      A +S  DI+ D +F ++ V      GPG+G VL+Y  ML  +F   + +AN +  + TF G+ GRL  G+ +D L S    D G+A  + G K TN  +LL+Q AA A +P  IR +  + F AA   +++ F+GG VV+ACL   VF   N++LAF+L+ +++G     FS V+A C++
Sbjct:    7 LLLRDYRYVVPVPACFLLQALFGLLYAQGVFVALVHTPQYTLAIGLASFFVSVGITLSGVSMSKLASSSPSHAQSAPVYAALAGSVGLSGQTVLALALALDNVHLLYAASVLYGTGCGCIYVASVDVLQAWVPESRGFITGVGMLCGAAGSLFGIYIYRALVAALGAPIPAMAFVGAVSAALSFAAAPMLKKPPAGWHPARDL-------------RAGG----DEENA--PLLITHAAQRALHSPPSAPH--PAVISVRDILRDRSFYMLVVAFAATVGPGFGLVLAYQTMLIDMFGAAISEANNLFFWITFSGLAGRLLAGIGVDALES----DVGSAPRLTGGKRTNMLLLLVQIAATASLPFFIRANMLYAFTAACALIYITFSGGPVVAACLVGAVFDQVNASLAFSLVAISIGAGDMFFSWVVAMCSE 415          
BLAST of Gvermi12765.t1 vs. uniprot
Match: R7QEU2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEU2_CHOCR)

HSP 1 Score: 243 bits (620), Expect = 5.930e-71
Identity = 160/477 (33.54%), Postives = 257/477 (53.88%), Query Frame = 0
Query:    3 LSHWRWLGPVPAAFVLQAVFGLQFANGVFASFVADPVLTQALGLAALFVSLGITAFGVLLYYASDHSKYHSLPRAVAVLGSLAVAAQVLVSYGLLNGSRAVVYAASILQGTGAGCIYVVSIVVVQDWVPESPALATGLSLLFGGAGSLFGIYAFQALVHAMGDALPAMAVASLGAGLVSVTASMFIERPPDRWCPVAEIFDPLTTMTLKDAHSARGAKRVDEQSICYSAIVDFGDDDVCHHKQNKSECGSARLSCYDIVVDPAFALVFVCVFVAAGPGYGFVLSYPLMLHSLFHMPLVDANQMLCYATFFGVVGRLALGVAIDTLSSKCSADEGAAASIRGSKTTNCFILLLQTAALALMPAAIRWHSAWLFHAAVFGVFVAFNGGAVVSACLARDVFAPDNSTLAFALLGVAVGVARALFSVVLAACADGSGV------------------GAYDWYIGWSVVVSVAGAAASFAIE 461
            L+  RW   VPA  +LQ  FGL +A+GVF + +  P+ T ++G+A   +++GIT FGVL+      S     P  +AV+G+LA+ AQVL+ + + + +  ++ A+++  G G+G IY+ S+ V+Q WVPE+P +  G+ +L GG GSL GI     L   +G  LPA+ V+   AG+V++ +++ + RPP  W P + +             +A GA  +DE+    S   D     +      +      +L+  DI+ D +F L+ V      GPG+GFVL++  M ++LF + + +AN++    TF GV GRL  G  +D L S  S DE    S+ G++ TN  +L+ QT AL  +P +I       F  A   V+V F+GG VV+AC+ R ++ P N++L F+L+ V++G     FS ++A C D S V                  G Y+ ++ + ++ S+ G AAS  IE
Sbjct:   31 LTTRRWYVQVPACCLLQITFGLFYASGVFIAEIDSPLFTFSIGVAGFSIAVGITFFGVLMNRLIPTSHSVLAPVYIAVIGALALFAQVLMPHAVASDNSVLLLASAVAVGLGSGAIYLASVDVLQSWVPEAPGVIMGIGMLCGGVGSLIGIRVDIVLTQLLGGPLPALGVSGAIAGVVALASAVLVRRPPPDWTPTSSV-------------TASGAPVMDEECGTVSLHSDSELAALLPLSTLELMRNCPQLTVKDILTDRSFYLLLVAFAATVGPGFGFVLAFQKMAYTLFGVSMAEANRLYFSVTFAGVAGRLVTGWTVDKLQSLDSRDED---SLYGARKTNMILLVGQTIALLAIPVSIHNGHVGAFTVASAAVYVTFSGGVVVAACMVRGIYMPRNASLGFSLVAVSIGFGDVFFSWIVAWCGDLSDVEKSYASAISPGVTSEAHQGDYNIFLLFGLLWSLCGLAASLCIE 491          
The following BLAST results are available for this feature:
BLAST of Gvermi12765.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ILG6_9FLOR1.550e-7537.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEU2_CHOCR5.930e-7133.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 102..460
e-value: 6.2E-12
score: 46.9
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 31..461
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 41..389
e-value: 6.3E-15
score: 55.0
NoneNo IPR availablePANTHERPTHR11360MONOCARBOXYLATE TRANSPORTERcoord: 6..428
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 367..371
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..288
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 396..406
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..160
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 430..440
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 372..395
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 441..460
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 329..348
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 407..429
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..307
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 461..481
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..328
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..264
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 161..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 349..366
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..126
NoneNo IPR availableTMHMMTMhelixcoord: 104..126
NoneNo IPR availableTMHMMTMhelixcoord: 349..366
NoneNo IPR availableTMHMMTMhelixcoord: 438..460
NoneNo IPR availableTMHMMTMhelixcoord: 265..287
NoneNo IPR availableTMHMMTMhelixcoord: 406..428
NoneNo IPR availableTMHMMTMhelixcoord: 302..324
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 371..393
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1425629..1427074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12765.t1Gvermi12765.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1425629..1427074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12765.t1 ID=Gvermi12765.t1|Name=Gvermi12765.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=482bp
MRLSHWRWLGPVPAAFVLQAVFGLQFANGVFASFVADPVLTQALGLAALF
VSLGITAFGVLLYYASDHSKYHSLPRAVAVLGSLAVAAQVLVSYGLLNGS
RAVVYAASILQGTGAGCIYVVSIVVVQDWVPESPALATGLSLLFGGAGSL
FGIYAFQALVHAMGDALPAMAVASLGAGLVSVTASMFIERPPDRWCPVAE
IFDPLTTMTLKDAHSARGAKRVDEQSICYSAIVDFGDDDVCHHKQNKSEC
GSARLSCYDIVVDPAFALVFVCVFVAAGPGYGFVLSYPLMLHSLFHMPLV
DANQMLCYATFFGVVGRLALGVAIDTLSSKCSADEGAAASIRGSKTTNCF
ILLLQTAALALMPAAIRWHSAWLFHAAVFGVFVAFNGGAVVSACLARDVF
APDNSTLAFALLGVAVGVARALFSVVLAACADGSGVGAYDWYIGWSVVVS
VAGAAASFAIEPAKCVNLGAASNRVFADAQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR011701MFS