Gvermi12745.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12745.t1
Unique NameGvermi12745.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length119
Homology
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BLAST of Gvermi12745.t1 vs. uniprot
Match: A0A2V3IFZ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFZ2_9FLOR)

HSP 1 Score: 118 bits (296), Expect = 2.950e-32
Identity = 69/120 (57.50%), Postives = 86/120 (71.67%), Query Frame = 0 
Query:    1 MAAPALTASATSLTVFALGSIANVAASNKPLAVRRSWLPGGSLMGTLHRQGSAPNAVAEPATPASPG--APESVSSGRKNVPIGGKTDKPAPPCPFGRFPKHKPTKLPGPPGPYDPSKSP 118
            MAAPA+ A+A+SLTV  LG+ AN+ ASNKPL ++ SWLP G  +G ++  G +  AVAEP+T       AP+         PIGG+TDKPAPPCPFGRFPKHKP+KLPGPP PY+P+ SP
Sbjct:    1 MAAPAINAAASSLTVVTLGAAANLLASNKPLQLK-SWLPSGGFVGVVNGNGRSSTAVAEPSTXXXXXXXAPKGTVK-----PIGGRTDKPAPPCPFGRFPKHKPSKLPGPPKPYNPANSP 114
The following BLAST results are available for this feature:
BLAST of Gvermi12745.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFZ2_9FLOR2.950e-3257.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..118
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1364374..1364730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12745.t1Gvermi12745.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1364374..1364730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12745.t1 ID=Gvermi12745.t1|Name=Gvermi12745.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=119bp
MAAPALTASATSLTVFALGSIANVAASNKPLAVRRSWLPGGSLMGTLHRQ
GSAPNAVAEPATPASPGAPESVSSGRKNVPIGGKTDKPAPPCPFGRFPKH
KPTKLPGPPGPYDPSKSP*
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