Gvermi12730.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12730.t1
Unique NameGvermi12730.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length105
Homology
BLAST of Gvermi12730.t1 vs. uniprot
Match: A0A2V3IND7_9FLOR (Transcription factor MYB3R-5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IND7_9FLOR)

HSP 1 Score: 189 bits (479), Expect = 4.020e-58
Identity = 87/101 (86.14%), Postives = 93/101 (92.08%), Query Frame = 0
Query:    1 LWTPHEDDRLRRLARLRPENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQYVR 101
            LWTP ED+RLR LAR+RPENWNVIAESLPGRTGKQCRERWLNHL++GIRKGFWT  ED II+ EQARRGNRWSDIARLLPGRSDNAVKNRFNATLKK  +R
Sbjct:  179 LWTPQEDERLRHLARMRPENWNVIAESLPGRTGKQCRERWLNHLRDGIRKGFWTPSEDAIILNEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKHIMR 279          
BLAST of Gvermi12730.t1 vs. uniprot
Match: UPI001E1D7134 (transcription factor MYB77-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D7134)

HSP 1 Score: 146 bits (368), Expect = 2.490e-43
Identity = 65/97 (67.01%), Postives = 82/97 (84.54%), Query Frame = 0
Query:    1 LWTPHEDDRLRRLARLRPENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKK 97
            +WT  ED+ LR++A   P+NWN+I  +LPGRTGKQCRERWLN+L+  IRKG W+  ED++II+EQA RGN+WS IAR+LPGRSDNAVKNR+NATL+K
Sbjct:    1 MWTSEEDELLRQIAGDSPDNWNIIGVALPGRTGKQCRERWLNNLRPDIRKGGWSREEDDLIIREQAYRGNQWSTIARMLPGRSDNAVKNRYNATLRK 97          
BLAST of Gvermi12730.t1 vs. uniprot
Match: A0A6B2LNX0_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LNX0_9EUKA)

HSP 1 Score: 123 bits (309), Expect = 4.280e-34
Identity = 56/98 (57.14%), Postives = 72/98 (73.47%), Query Frame = 0
Query:    2 WTPHEDDRLRRLARLR-PENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQ 98
            WT  ED ++R L +L  P+ W++IA  LPGR GKQCRERW NHL  GIRKG W   EDE+I + Q   GN+W+ IA+ LPGR+DNA+KNRFN+TL ++
Sbjct:   45 WTEEEDRKVRELVKLYGPKKWSLIASQLPGRIGKQCRERWTNHLDPGIRKGNWEPWEDELITKLQGEMGNKWARIAQHLPGRTDNAIKNRFNSTLSRK 142          
BLAST of Gvermi12730.t1 vs. uniprot
Match: A0A0C2MT16_THEKT (Transcriptional activator Myb n=1 Tax=Thelohanellus kitauei TaxID=669202 RepID=A0A0C2MT16_THEKT)

HSP 1 Score: 125 bits (313), Expect = 1.930e-33
Identity = 55/98 (56.12%), Postives = 75/98 (76.53%), Query Frame = 0
Query:    2 WTPHEDDRLRRLARLR-PENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQ 98
            W   ED ++  L  +  P++WNVIA+SLPGRTGKQCRERW NHL   + KG WT  E+ +I+Q Q++ GN+W+DIA+ LPGR+DNA+KN +N+TLKK+
Sbjct:   78 WQKDEDVQITNLVSINGPKSWNVIAKSLPGRTGKQCRERWHNHLDPSVNKGPWTPHEESLIVQLQSQIGNKWADIAKKLPGRTDNAIKNHWNSTLKKR 175          
BLAST of Gvermi12730.t1 vs. uniprot
Match: F0YHL4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHL4_AURAN)

HSP 1 Score: 121 bits (303), Expect = 5.530e-33
Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    2 WTPHEDDRLRRLA-RLRPENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQ 98
            W P ED  LR+L  +  P+ W +IA  +PGR GKQCRERWLNHL   + K  WT  ED ++++ Q R GN+WS+IARLLPGR++NAVKNRFN+ + K+
Sbjct:   61 WLPEEDSLLRQLVNKFGPKRWALIASHIPGRAGKQCRERWLNHLDTRVIKSDWTPDEDAVLLEAQQRVGNKWSEIARLLPGRAENAVKNRFNSLITKR 158          
BLAST of Gvermi12730.t1 vs. uniprot
Match: A0A5J4Z7G3_PORPP (Myb-related protein A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G3_PORPP)

HSP 1 Score: 122 bits (306), Expect = 8.770e-33
Identity = 56/99 (56.57%), Postives = 72/99 (72.73%), Query Frame = 0
Query:    2 WTPHEDDRLRRL-ARLRPENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQY 99
            W P ED+ LR L A++ P  W+++A  +PGRTGKQ RERWLN L   + K  WT  ED II+   +R GNRWS+IA+LL GR+DN+VKNRFN+T+KK Y
Sbjct:  106 WRPEEDELLRSLVAKMGPRRWSLVAAQIPGRTGKQSRERWLNQLSPSLAKAPWTEEEDMIIMDAHSRLGNRWSEIAKLLNGRTDNSVKNRFNSTIKKLY 204          
BLAST of Gvermi12730.t1 vs. uniprot
Match: Q20CK0_EUPAE (EMYB4 n=1 Tax=Euplotes aediculatus TaxID=5940 RepID=Q20CK0_EUPAE)

HSP 1 Score: 122 bits (307), Expect = 1.850e-32
Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 0
Query:    2 WTPHEDDR-LRRLARLRPENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQ 98
            WTP ED + +  + +   +NW+ IA  LPGR GKQCRERW NHL  GI++G WT +ED+II++   + GNRW++IA+LLPGR+DN +KN FN+T++++
Sbjct:   75 WTPEEDQKVIEMVKKYGAKNWSAIANHLPGRIGKQCRERWHNHLNPGIKRGKWTEQEDQIIVKAHEKLGNRWAEIAKLLPGRTDNHIKNHFNSTIRRK 172          
BLAST of Gvermi12730.t1 vs. uniprot
Match: Q7XZ94_GRIJA (Transforming protein myb (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ94_GRIJA)

HSP 1 Score: 120 bits (301), Expect = 2.860e-32
Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 0
Query:    2 WTPHEDDRLRRL-ARLRPENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQ 98
            W P ED  L +L A+L P  W VIA  +PGRTGKQ RERWLN L   + K  WT  ED +++Q  AR GNRWS+IA+LL GR+DNA KNRFN T+++Q
Sbjct:   12 WRPEEDAILTQLVAKLGPRRWTVIASHIPGRTGKQARERWLNQLSPDLAKRPWTPEEDRVVMQAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQ 109          
BLAST of Gvermi12730.t1 vs. uniprot
Match: UPI0000358830 (C-Myb DNA-Binding Domain n=1 Tax=Mus musculus TaxID=10090 RepID=UPI0000358830)

HSP 1 Score: 117 bits (292), Expect = 5.360e-32
Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    2 WTPHEDDRLRRLA-RLRPENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQ 98
            WT  ED R+ +L  +  P+ W+VIA+ L GR GKQCRERW NHL   ++K  WT  ED II Q   R GNRW++IA+LLPGR+DNA+KN +N+T++++
Sbjct:    7 WTKEEDQRVIKLVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 104          
BLAST of Gvermi12730.t1 vs. uniprot
Match: Q8MPH7_OXYTR (C-myb like protein n=2 Tax=Oxytricha trifallax TaxID=94289 RepID=Q8MPH7_OXYTR)

HSP 1 Score: 124 bits (311), Expect = 1.220e-31
Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    2 WTPHEDDRLRRLARLR-PENWNVIAESLPGRTGKQCRERWLNHLQEGIRKGFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQYVR 101
            WT  ED+ LR++     P NW+ IA +LPGR GKQCRERW NHL   I+K  W+  ED II++     GNRW +IA+LLPGR+DNA+KNRFN+ LKKQ  R
Sbjct:  148 WTKEEDEILRQMVETHGPRNWSTIAAALPGRIGKQCRERWHNHLDPNIKKEKWSPEEDRIILKMHLEMGNRWCEIAKLLPGRTDNAIKNRFNSKLKKQISR 248          
The following BLAST results are available for this feature:
BLAST of Gvermi12730.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IND7_9FLOR4.020e-5886.14Transcription factor MYB3R-5 n=1 Tax=Gracilariopsi... [more]
UPI001E1D71342.490e-4367.01transcription factor MYB77-like n=1 Tax=Mercenaria... [more]
A0A6B2LNX0_9EUKA4.280e-3457.14Uncharacterized protein (Fragment) n=1 Tax=Arcella... [more]
A0A0C2MT16_THEKT1.930e-3356.12Transcriptional activator Myb n=1 Tax=Thelohanellu... [more]
F0YHL4_AURAN5.530e-3355.10Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A5J4Z7G3_PORPP8.770e-3356.57Myb-related protein A n=1 Tax=Porphyridium purpure... [more]
Q20CK0_EUPAE1.850e-3252.04EMYB4 n=1 Tax=Euplotes aediculatus TaxID=5940 RepI... [more]
Q7XZ94_GRIJA2.860e-3257.14Transforming protein myb (Fragment) n=1 Tax=Griffi... [more]
UPI00003588305.360e-3253.06C-Myb DNA-Binding Domain n=1 Tax=Mus musculus TaxI... [more]
Q8MPH7_OXYTR1.220e-3156.44C-myb like protein n=2 Tax=Oxytricha trifallax Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 2..46
e-value: 1.1E-8
score: 44.9
coord: 49..97
e-value: 1.3E-11
score: 54.5
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 1..44
score: 10.545467
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 45..95
score: 9.662925
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 2..44
e-value: 3.62888E-7
score: 41.407
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 53..95
e-value: 3.84377E-8
score: 43.7182
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 2..44
e-value: 2.8E-14
score: 53.0
coord: 51..92
e-value: 2.6E-11
score: 43.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..48
score: 21.705029
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 49..99
score: 19.589624
NoneNo IPR availableGENE3D1.10.10.60coord: 52..103
e-value: 1.7E-17
score: 65.2
NoneNo IPR availableGENE3D1.10.10.60coord: 1..49
e-value: 4.4E-18
score: 66.9
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 2..98
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 23..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1238889..1239296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12730.t1Gvermi12730.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1238889..1239296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12730.t1 ID=Gvermi12730.t1|Name=Gvermi12730.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=105bp
LWTPHEDDRLRRLARLRPENWNVIAESLPGRTGKQCRERWLNHLQEGIRK
GFWTAREDEIIIQEQARRGNRWSDIARLLPGRSDNAVKNRFNATLKKQYV
RYPY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf