Gvermi12718.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12718.t1
Unique NameGvermi12718.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length459
Homology
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BLAST of Gvermi12718.t1 vs. uniprot
Match: A0A2V3ILG0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG0_9FLOR)

HSP 1 Score: 446 bits (1148), Expect = 5.410e-151
Identity = 241/436 (55.28%), Postives = 299/436 (68.58%), Query Frame = 0 
Query:   27 ARHELLRHLLPNPPSFTLIPSSSCADCFSNYLLFEDTAKHSSLRHLRPLSITLHPSPSSSPPIHIAQKLEQQLQHGTQLVFLSFANAVLVHALTTFSCLPQPTPDRRAHPQICFVIAMLPNDEYKSP---SVNSWLWPLGYSEPDPAAPSSGEFLLPSESAAVMLYGAVCGMAATMIGSDAKTISAAHMFVMPQKVLAVLHRFAQAASNILNGSEHLQQLLDEEQLQVADHIYTLRRHALAHILPCGCVMFPYASSPPTSVPKCAPPPAIHVRVLRAMQLPANQVEQWW-QTDRDACEMNYLRQSYLHHLRGADMKVSIRAHLSYLQLFHAHRPSNALFALSDQMSQSPTRDWELKEAVEWLAKAFRGSEAWVKERMCSDDSENQRDVFERELAFQVFGRLALFRSRNEVVRKFVSTLETIAGPTRRDTKGAVEDF 458
            AR+ LL+HLLP  P+ TL+ SSS A+C +++LLF  T  H SL+HL P  +TLH  PS+SPP+ I   L+      TQLVF+SFA+A  V +L+ F  L +P   RRA   I FV+A+LPN+  K P    V   L  +  SE + +   SG+FLLPSESAAVMLYG VCGMAA +   +     +   FVMP KVLAVL RF  AAS      + LQQLLDEE+ +V D ++TL RHALAH LPC CV+FPY  +P  SVPKC PPPA+H RVLRA+ L  + VE+WW     + CE++YL  SYLHHLRGA    S+ AHLSY QL H+HRPS AL  L  QM   P  DWE+KEA+EWLAK FR SE  +++R+C +D++NQ+ VFERELAFQVFGRLALFR+RNEVVRKFV+ LE  AGPTRR  KG +E+F
Sbjct:   35 ARNALLKHLLPKLPNLTLLRSSSSAECVAHHLLFGKTYSHFSLQHLHPQFVTLHAVPSASPPVDIEPILKHIQASKTQLVFISFASAPFVRSLSAFLEL-RPKKGRRASSNISFVVALLPNE--KPPPRLQVQHSLLRIDDSEYESSFSGSGDFLLPSESAAVMLYGVVCGMAAALRDEEPHNNPSLQPFVMPMKVLAVLRRFTHAASRTTTDEKELQQLLDEERHKVEDDLFTLSRHALAHNLPCACVVFPYVGNPSKSVPKCTPPPALHARVLRALGLAPHSVEEWWCSPSTNPCELHYLGHSYLHHLRGAKATASVSAHLSYPQLLHSHRPSVALHLLHAQMCALPLWDWEMKEAIEWLAKTFRASEVCIEKRLCIEDADNQQAVFERELAFQVFGRLALFRNRNEVVRKFVAGLEISAGPTRRQEKGVLEEF 467
The following BLAST results are available for this feature:
BLAST of Gvermi12718.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILG0_9FLOR5.410e-15155.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:1113855..1115231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12718.t1Gvermi12718.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 1113855..1115231 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12718.t1 ID=Gvermi12718.t1|Name=Gvermi12718.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=459bp
MSTPRRVSRPKRKPLPVLLPPQSPTEARHELLRHLLPNPPSFTLIPSSSC
ADCFSNYLLFEDTAKHSSLRHLRPLSITLHPSPSSSPPIHIAQKLEQQLQ
HGTQLVFLSFANAVLVHALTTFSCLPQPTPDRRAHPQICFVIAMLPNDEY
KSPSVNSWLWPLGYSEPDPAAPSSGEFLLPSESAAVMLYGAVCGMAATMI
GSDAKTISAAHMFVMPQKVLAVLHRFAQAASNILNGSEHLQQLLDEEQLQ
VADHIYTLRRHALAHILPCGCVMFPYASSPPTSVPKCAPPPAIHVRVLRA
MQLPANQVEQWWQTDRDACEMNYLRQSYLHHLRGADMKVSIRAHLSYLQL
FHAHRPSNALFALSDQMSQSPTRDWELKEAVEWLAKAFRGSEAWVKERMC
SDDSENQRDVFERELAFQVFGRLALFRSRNEVVRKFVSTLETIAGPTRRD
TKGAVEDF*
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