Gvermi12653.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12653.t1
Unique NameGvermi12653.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length275
Homology
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BLAST of Gvermi12653.t1 vs. uniprot
Match: A0A2V3J3J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3J0_9FLOR)

HSP 1 Score: 102 bits (255), Expect = 5.090e-21
Identity = 77/185 (41.62%), Postives = 106/185 (57.30%), Query Frame = 0 
Query:   31 SSTGSLSPLSAAVSTRTSVTLPQHS-VHPVSPPPTAMSDERPSLGPLAKIPLRPSLRPVLQLDLDAVAEQLSIFQGAAVTQEDLRNSFPIAKKQPQSPLQPSSV-PKSFASVYPSGTETPVIPLSVEVAGVNDDRE----GQNLVLQFETVEEALGLSDSPDSPNEMGDKVDASKGWAVSVPYLP 209
            SS G++SP    ++ ++S+T  QH+ +HP S PP +         PLA++P RPSLRP+LQ+D D VA++L+ FQGA+VT +DL+NS P      Q     SS  P    S+  SGT TP +P+SVEVA  ND+       Q +VL+    EEAL   D   S  +     D SKG+A+S P  P
Sbjct:   42 SSYGAISPF---LTPQSSLTFAQHAQIHPSSYPPASPLTPNLPPTPLARVPSRPSLRPLLQIDFDQVAQELNRFQGASVTGQDLKNSIPAT----QGSFDVSSTAPTPRDSLTVSGTATPSVPMSVEVAH-NDNASPYTTDQAMVLKIRAAEEALRSPDVSWSQLDSDVLPDTSKGYAMSFPVNP 218
The following BLAST results are available for this feature:
BLAST of Gvermi12653.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3J0_9FLOR5.090e-2141.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:84392..85886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12653.t1Gvermi12653.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 84392..85886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12653.t1 ID=Gvermi12653.t1|Name=Gvermi12653.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=275bp
MADGPNPSRSSSGQASQSLPVQQLAAEIHGSSTGSLSPLSAAVSTRTSVT
LPQHSVHPVSPPPTAMSDERPSLGPLAKIPLRPSLRPVLQLDLDAVAEQL
SIFQGAAVTQEDLRNSFPIAKKQPQSPLQPSSVPKSFASVYPSGTETPVI
PLSVEVAGVNDDREGQNLVLQFETVEEALGLSDSPDSPNEMGDKVDASKG
WAVSVPYLPSVVVSSVQSMIPVVGTTMAVLMGTEHVPDVWTTLGGSVLLC
GVLVIADATKRSEVTVVLNEHLTS*
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