Gvermi12487.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12487.t1
Unique NameGvermi12487.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length644
Homology
BLAST of Gvermi12487.t1 vs. uniprot
Match: A0A0C3AKN9_9AGAM (Uncharacterized protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKN9_9AGAM)

HSP 1 Score: 75.5 bits (184), Expect = 2.140e-10
Identity = 38/118 (32.20%), Postives = 70/118 (59.32%), Query Frame = 0
Query:    6 SPPKNTAETLDNLSATTGALIDAFDQIITLPFVDSLKIDALG--DLSIADVVLDLKQKYQELQGNTLPFARTLHAYAGLQLQTIPTINAGLDLSTYLNLHKIIIARHKLEASNVKKQS 121
            +PP  +A+TL +++ATTG +   F +I+T+PF+D LK+      + S+  V+L  K KY+ LQ  T+P  R L++YA LQ   +P +   + L+ +L  ++ ++ ++   A  + K +
Sbjct:  375 APPAYSAQTLPDMTATTGKINADFTKIMTMPFIDQLKVTGADGQETSLGSVMLSCKTKYEALQMKTIPIVRDLYSYAMLQQTVLPIVGNTMSLTDFLASNQWLVMKYGASAKQIAKDT 492          
BLAST of Gvermi12487.t1 vs. uniprot
Match: A0A0D2P279_HYPSF (Uncharacterized protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2P279_HYPSF)

HSP 1 Score: 74.7 bits (182), Expect = 3.650e-10
Identity = 40/126 (31.75%), Postives = 74/126 (58.73%), Query Frame = 0
Query:    1 MTTEISPPKNTAETLDNLSATTGALIDAFDQIITLPFVDSLKIDALGDL--SIADVVLDLKQKYQELQGNTLPFARTLHAYAGLQLQTIPTINA--GLDLSTYLNLHKIIIARHKLEASNVKKQSE 122
            +T    PP + + TL  +SATTG ++  F++I+TLPFVD LK+    ++  S+  V+++ K++Y+ LQG T+   R L+ Y+ LQ   +P +N   GL L  +L  +  ++ ++  +A  +   ++
Sbjct:  335 VTAAFGPPSDASTTLPEMSATTGQIVANFNKILTLPFVDDLKVKDKNEVETSVYTVMVNCKRQYEALQGTTVEIVRDLNGYSLLQDVILPMVNTSDGLSLDEFLRTNLPLVMKYGKDAKKIATDTQ 460          
BLAST of Gvermi12487.t1 vs. uniprot
Match: A0A0D2L706_HYPSF (Uncharacterized protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2L706_HYPSF)

HSP 1 Score: 64.7 bits (156), Expect = 3.640e-7
Identity = 38/128 (29.69%), Postives = 73/128 (57.03%), Query Frame = 0
Query:    5 ISPPKNTAETLDNLSATTGALIDAFDQIITLPFVDSLK----IDALGDLSIADVVLDLKQKYQELQGNTLPFARTLHAYAGLQLQTIPTI-------NAGLDLSTYLNLHKIIIARHKLEASNVKKQS 121
            + PP  T + L++L+ +TG +ID FD ++  P++D  K    +D   D ++  V+   + +Y +LQ +TLP AR L AYAGLQ   +P +          + +S +L  +  +++ +K++A+++  +S
Sbjct:  296 LGPPAETQKRLEDLADSTGRVIDKFDTLLQQPYLDQYKCTSPVDG-SDSNLYTVMNYYRNEYLKLQQDTLPVARDLGAYAGLQAALLPLVVPDAQAQGTDIAMSVFLATNTPLVSEYKVKATDLSNRS 422          
BLAST of Gvermi12487.t1 vs. uniprot
Match: A0A0D2L707_HYPSF (Uncharacterized protein n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2L707_HYPSF)

HSP 1 Score: 56.2 bits (134), Expect = 2.890e-6
Identity = 29/68 (42.65%), Postives = 46/68 (67.65%), Query Frame = 0
Query:   18 LSATTGALIDAFDQIITLPFVDSLKIDALGDL--SIADVVLDLKQKYQELQGNTLPFARTLHAYAGLQ 83
            +SATTG +I  FD+I+TLPFVD LK+  +  +  S+  ++L+ K +Y+ LQ  T+   R L++Y+ LQ
Sbjct:    1 MSATTGQIIANFDKILTLPFVDDLKVTDVDGVESSVYTIMLNCKTQYEALQSRTVEIVRNLNSYSVLQ 68          
The following BLAST results are available for this feature:
BLAST of Gvermi12487.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A0C3AKN9_9AGAM2.140e-1032.20Uncharacterized protein n=1 Tax=Serendipita vermif... [more]
A0A0D2P279_HYPSF3.650e-1031.75Uncharacterized protein n=1 Tax=Hypholoma sublater... [more]
A0A0D2L706_HYPSF3.640e-729.69Uncharacterized protein n=1 Tax=Hypholoma sublater... [more]
A0A0D2L707_HYPSF2.890e-642.65Uncharacterized protein n=1 Tax=Hypholoma sublater... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..166
NoneNo IPR availableCOILSCoilCoilcoord: 456..476
NoneNo IPR availableGENE3D1.20.1170.10coord: 50..336
e-value: 4.2E-11
score: 44.5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 188..643
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..187
NoneNo IPR availableSUPERFAMILY58100Bacterial hemolysinscoord: 65..332
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 197..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:5357129..5359060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12487.t1Gvermi12487.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 5357129..5359060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12487.t1 ID=Gvermi12487.t1|Name=Gvermi12487.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=644bp
MTTEISPPKNTAETLDNLSATTGALIDAFDQIITLPFVDSLKIDALGDLS
IADVVLDLKQKYQELQGNTLPFARTLHAYAGLQLQTIPTINAGLDLSTYL
NLHKIIIARHKLEASNVKKQSETFRKTFVATLDVFQSTIKELGEQIQDLE
KQIQDTKDLQEKERAVAIIAGIFTFVFTVVAILAIVATAGAVSGASAGFF
ATLGASIGTAGGTSGLIAVSAASSTAALGGLAETIVSSIEARNFARAVSA
LETLKQSAETARDQLLEVVDLMTDIENSLEDIVSVWTDVENSLSIIQSDV
DSWNDENFSEELVASTLEEWEDVRTAVAKYTAVVSGDRNLNMEKQSDAHL
PADEIINLTRSFVISELQSNLHAPDIEFDGKLSDLYQMRSALETTKSLPN
IRDTLKSQITAALGYLGEVQTGLEQSSDELASFTKQRLTWLDAFEIAEVT
KRIDMVTQLEATVENFEVGIARAQETEAKAFLFQTSVGLVINTLIRIIGE
NNVKQHALKKKLEKLEKDRKRRKWLWVVPVAGAINEIVDAANNIRGKIKR
GRREIRLISNRCQQLRKLSSAVSSSVKDSTLVTQTYSSILNDTRAGIDDA
SIFEVFGAALPADLFVSLKESWIELELDIKEFKEQHVENKSDT*
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