Gvermi12440.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12440.t1
Unique NameGvermi12440.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length210
Homology
BLAST of Gvermi12440.t1 vs. uniprot
Match: A0A2V3IQH9_9FLOR (Sucrose transport protein SUC2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQH9_9FLOR)

HSP 1 Score: 293 bits (750), Expect = 4.920e-94
Identity = 149/176 (84.66%), Postives = 162/176 (92.05%), Query Frame = 0
Query:   30 MKQWRIASCAIAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKVAYILSGSPSPSIALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTIMP 205
            MK WRIA CA+AMAGIQVCYAAQINLGTAQLLLLG+SERAVSLAWLAGPLSGLIVQPIVGH+SDGCTH LGRRRPFLIAGTIFT+ ALLLFSHA +V+  LSG PSPS AL+LA+C+FF LDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTG+GNL+GG+LA MEL  + P
Sbjct:   11 MKHWRIAVCALAMAGIQVCYAAQINLGTAQLLLLGISERAVSLAWLAGPLSGLIVQPIVGHISDGCTHWLGRRRPFLIAGTIFTTAALLLFSHATQVSTFLSGRPSPSFALSLAVCSFFLLDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGLGNLLGGVLAAMELSKVFP 186          
BLAST of Gvermi12440.t1 vs. uniprot
Match: R7Q5R0_CHOCR (MFS domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5R0_CHOCR)

HSP 1 Score: 246 bits (627), Expect = 5.530e-76
Identity = 124/180 (68.89%), Postives = 153/180 (85.00%), Query Frame = 0
Query:   30 MKQWRIASCAIAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKVA-YILSGSPSPSIALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTIMPVHD 208
            M +WRI +CA+AM GIQVCYAAQIN+GTA+LLLLG+SERAVSLAWLAGPLSGLIVQP+VG+ SD CT  LGRRRPFLIAG++FT+ ALLLFS+A  +A Y++    S  +AL +AI +FF LDFSIQAIQAPLRAL+TDVVP+ QR+LAN+YIGVFTG+GNL+GGLL  ++L  ++P+  
Sbjct:    1 MPEWRIVACALAMCGIQVCYAAQINMGTAELLLLGISERAVSLAWLAGPLSGLIVQPLVGYASDSCTSALGRRRPFLIAGSLFTAVALLLFSNATALAAYLVPEERSMRVALVIAILSFFLLDFSIQAIQAPLRALVTDVVPRRQRSLANAYIGVFTGLGNLIGGLLTALKLTALIPIFQ 180          
BLAST of Gvermi12440.t1 vs. uniprot
Match: R7QD15_CHOCR (MFS domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD15_CHOCR)

HSP 1 Score: 231 bits (589), Expect = 5.040e-70
Identity = 119/178 (66.85%), Postives = 148/178 (83.15%), Query Frame = 0
Query:   30 MKQWRIASCAIAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKVAYI-LSGSPSPSIALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTIMPV 206
            M +WRI  C +AMAG+QVCYAAQIN GT++LLLLG+S R VSLAWLAGPLSGL++QP+VG +SD CT  LGRRRPFLI G+I TS +LL+FS+A  +A + + GS + S+AL++AI AFF +DFSIQ +QAPLRAL+TDVVP+ QRALANSYIGVF+GVG LVGGLL  + L+ I+PV
Sbjct:   32 MPRWRIILCTVAMAGVQVCYAAQINHGTSELLLLGMSSRLVSLAWLAGPLSGLVMQPLVGRLSDRCTSRLGRRRPFLILGSILTSLSLLMFSNAELLAGVFVDGSKTKSVALSIAIVAFFLMDFSIQIVQAPLRALVTDVVPKKQRALANSYIGVFSGVGLLVGGLLTSISLRRILPV 209          
BLAST of Gvermi12440.t1 vs. uniprot
Match: A0A2V3J619_9FLOR (Sucrose transport protein SUT5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J619_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 1.070e-64
Identity = 116/179 (64.80%), Postives = 137/179 (76.54%), Query Frame = 0
Query:   30 MKQWRIASCAIAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKVAYILSGSPSPSIALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTIMPVHD 208
            + +WRI  CA AM G+ V Y+AQINLGT+QLLLLG+SERAVSLAWLAGPLSGLIVQPIVG VSD CT P+GRRRPFLIAG + TS ALLLF++A  VA    G P  S  L LAI AFF LDFS+QA+Q PLRALIT+ VP+ QR + NSYIGVFTG+GNL+G +   + L   +P  +
Sbjct:   49 ISRWRITLCAFAMCGVSVSYSAQINLGTSQLLLLGISERAVSLAWLAGPLSGLIVQPIVGFVSDRCTSPMGRRRPFLIAGALLTSAALLLFANAPLVAQAF-GVPGAS--LPLAIVAFFLLDFSVQAVQGPLRALITEFVPRDQRHIGNSYIGVFTGLGNLLGSVFTAVGLSDYIPFFE 224          
BLAST of Gvermi12440.t1 vs. uniprot
Match: R7Q7P7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7P7_CHOCR)

HSP 1 Score: 197 bits (502), Expect = 2.070e-57
Identity = 109/186 (58.60%), Postives = 133/186 (71.51%), Query Frame = 0
Query:   25 AEPTPMKQWRIASCAIAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKVAYILSGSPSPSIA-LALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTIMPVHDA 209
            A+P P+   R+    +AMAGIQVCYAAQIN GT+ L  LG+    VSLAWLAGPLSGL++QP+VG  SD CT  LGRRRPFL+ GTIFT  ALLLF+ + ++A+     P  + A L+LA+ AFF LDFS+QAIQAPLRAL+TDV P+   A  N+ IG FTG GNL+GGLLAG  L   +PV  A
Sbjct:    7 AKPPPLS--RLLLTTVAMAGIQVCYAAQINFGTSHLKSLGMPLPLVSLAWLAGPLSGLLMQPLVGFASDRCTSRLGRRRPFLLLGTIFTVLALLLFAFSRRLAHAFLAPPRAAHASLSLAVLAFFLLDFSVQAIQAPLRALVTDVAPRGMLARGNAAIGFFTGAGNLLGGLLAGASLSKALPVFPA 190          
BLAST of Gvermi12440.t1 vs. uniprot
Match: M2WYC9_GALSU (Sucrose transporter, GPH family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WYC9_GALSU)

HSP 1 Score: 192 bits (489), Expect = 4.200e-55
Identity = 103/197 (52.28%), Postives = 133/197 (67.51%), Query Frame = 0
Query:   10 PIVHSLSSPAIQKTYAEPTPMKQWRIASCAIAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKVAYILSGS-PSPSIALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTIMP 205
            P VH     + ++      P+ ++R+    +AMAGIQ CYA QI  G+  L  LGL    VSLAWLAGPLSG+IVQPI+G +SD C HP GRRRPFL+AGT+FTS AL L  +A  + Y+   S  S  + LA+AI AFF LDFSIQAIQAPLRAL+TD+VP+ Q+A  N+   + TGVGNLVG  +  ++L  ++P
Sbjct:   57 PFVHRGYESSDEERKRAREPVDKFRLIMLTLAMAGIQCCYAVQIGHGSPTLEKLGLPTELVSLAWLAGPLSGIIVQPIIGILSDSCQHPFGRRRPFLVAGTVFTSLALSLLGNADVIGYLFGDSVDSQPVGLAIAISAFFLLDFSIQAIQAPLRALLTDIVPEEQQAEGNALFAMMTGVGNLVGTAMGSLQLSFMLP 253          
BLAST of Gvermi12440.t1 vs. uniprot
Match: A0A2V3IQJ1_9FLOR (Sucrose transport protein SUC9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQJ1_9FLOR)

HSP 1 Score: 191 bits (485), Expect = 7.850e-55
Identity = 98/165 (59.39%), Postives = 128/165 (77.58%), Query Frame = 0
Query:   40 IAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKVAYILSGSPS-PSIALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTI 203
            +AMAG+QVCYAAQINLGT  L+ LGL  +  SLAWLAGPL+GLIVQP+VG +SD CTHPLGRRRPF+I G + T+ +LL FS+A ++A ++S   +  +++LALA+ +FFALDFSIQAIQAPLRAL+ DV+P  + + ANS I  + GVGNLVGGL   +   ++
Sbjct:   36 LAMAGVQVCYAAQINLGTTHLVHLGLPHKFASLAWLAGPLAGLIVQPVVGFLSDNCTHPLGRRRPFIIVGALLTALSLLTFSNATQLATLISSKENVDAVSLALAVVSFFALDFSIQAIQAPLRALVNDVMPPAKLSSANSCISFYCGVGNLVGGLWTAVHWSSL 200          
BLAST of Gvermi12440.t1 vs. uniprot
Match: A0A5J4YYB5_PORPP (Sucrose transport protein SUC4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYB5_PORPP)

HSP 1 Score: 175 bits (444), Expect = 6.240e-49
Identity = 98/186 (52.69%), Postives = 125/186 (67.20%), Query Frame = 0
Query:   29 PMKQWRIASCAIAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKV----AYILSGSPSPSIALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMEL-KTIMPVHDA 209
            P+ QWR+   A+AM G+Q+CYA QI  GT QL +LG+    VSLAWLAGPLSGLIVQP+VG +SD     LGRRRPFLI G + +S ALL+FS+A  +    A ILSGS S + ++   +  FF LDFS+ AIQ PLRAL+TDV PQ Q+A  N+Y     G+GNL+G  L  + L K  +P+  A
Sbjct:    3 PLPQWRLIMLALAMCGVQICYAVQIGHGTPQLEILGMDTAYVSLAWLAGPLSGLIVQPLVGALSDKTPWSLGRRRPFLIIGCVLSSLALLMFSNAKSLGAFCARILSGS-SKAWSIMFGVLGFFFLDFSVNAIQGPLRALLTDVTPQEQQATGNAYFAFMVGLGNLLGSYLGSLNLMKLRIPLFTA 187          
BLAST of Gvermi12440.t1 vs. uniprot
Match: A0A7S0ZLA5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLA5_9RHOD)

HSP 1 Score: 174 bits (442), Expect = 3.870e-48
Identity = 96/176 (54.55%), Postives = 115/176 (65.34%), Query Frame = 0
Query:   41 AMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHAGKVAYILSGSPSPS-----------IALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTIMP 205
            AM GIQVCYA QI  G+A L LLG+  R VS+AWLAGPLSGLIVQP+VG +SD C  PLGRRRPFL++G + T+ ALLLFS++  +   L  S  P            I LA+ + +FF LDFSIQAIQ PLRALITDV+P  Q    NSY+ +  G GNLVG  L  + L    P
Sbjct:   98 AMCGIQVCYAVQIGHGSATLELLGMPTRWVSVAWLAGPLSGLIVQPLVGVLSDACKSPLGRRRPFLLSGCVLTTIALLLFSNSSSIGMYLGDSVLPQEAKTESNTGTEIGLAIGVFSFFLLDFSIQAIQGPLRALITDVLPPQQHPQGNSYLALMVGAGNLVGSWLGSLNLYRYFP 273          
BLAST of Gvermi12440.t1 vs. uniprot
Match: A0A5J4YYG0_PORPP (Sucrose transport protein SUC3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYG0_PORPP)

HSP 1 Score: 171 bits (432), Expect = 4.040e-47
Identity = 85/177 (48.02%), Postives = 119/177 (67.23%), Query Frame = 0
Query:   30 MKQWRIASCAIAMAGIQVCYAAQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLGRRRPFLIAGTIFTSCALLLFSHA---GKVAYILSGSPSPSIALALAICAFFALDFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMELKTI 203
            + QWR+    +AM G+Q+CYA QI  GT QL +LG+  + VSLAWLAGPLSGLI+QP++G +SD C  PLG+RRPFLI G + +S AL++FS+A   G+      G    + ++   I  FF LDFS+ AIQ PLRAL+TDV P+ Q+A  N+Y     G+GNL+G  L  ++ +++
Sbjct:    9 LPQWRLLMLTVAMCGVQICYAVQIGHGTPQLEVLGMGTQYVSLAWLAGPLSGLIMQPLIGVLSDRCVSPLGKRRPFLIIGCVLSSLALIMFSNAAQLGRACATALGGSLTAWSIFFGIMGFFFLDFSVNAIQGPLRALLTDVTPEAQQATGNAYFAFMVGLGNLLGSYLGSLDFRSM 185          
The following BLAST results are available for this feature:
BLAST of Gvermi12440.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQH9_9FLOR4.920e-9484.66Sucrose transport protein SUC2 n=1 Tax=Gracilariop... [more]
R7Q5R0_CHOCR5.530e-7668.89MFS domain-containing protein n=1 Tax=Chondrus cri... [more]
R7QD15_CHOCR5.040e-7066.85MFS domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A2V3J619_9FLOR1.070e-6464.80Sucrose transport protein SUT5 n=1 Tax=Gracilariop... [more]
R7Q7P7_CHOCR2.070e-5758.60Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2WYC9_GALSU4.200e-5552.28Sucrose transporter, GPH family n=1 Tax=Galdieria ... [more]
A0A2V3IQJ1_9FLOR7.850e-5559.39Sucrose transport protein SUC9 n=1 Tax=Gracilariop... [more]
A0A5J4YYB5_PORPP6.240e-4952.69Sucrose transport protein SUC4 n=1 Tax=Porphyridiu... [more]
A0A7S0ZLA5_9RHOD3.870e-4854.55Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YYG0_PORPP4.040e-4748.02Sucrose transport protein SUC3 n=1 Tax=Porphyridiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036259MFS transporter superfamilyGENE3D1.20.1250.20MFS general substrate transporter like domainscoord: 28..204
e-value: 2.1E-15
score: 58.7
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 30..198
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 47..198
e-value: 1.6E-11
score: 43.7
NoneNo IPR availablePANTHERPTHR19432:SF35LP09277Pcoord: 32..199
NoneNo IPR availablePANTHERPTHR19432SUGAR TRANSPORTERcoord: 32..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 197..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..52
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 105..124
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 176..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4755787..4756490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12440.t1Gvermi12440.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4755787..4756490 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12440.t1 ID=Gvermi12440.t1|Name=Gvermi12440.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=210bp
MEIHPKMGVPIVHSLSSPAIQKTYAEPTPMKQWRIASCAIAMAGIQVCYA
AQINLGTAQLLLLGLSERAVSLAWLAGPLSGLIVQPIVGHVSDGCTHPLG
RRRPFLIAGTIFTSCALLLFSHAGKVAYILSGSPSPSIALALAICAFFAL
DFSIQAIQAPLRALITDVVPQPQRALANSYIGVFTGVGNLVGGLLAGMEL
KTIMPVHDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR011701MFS