Gvermi12406.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12406.t1
Unique NameGvermi12406.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length628
Homology
BLAST of Gvermi12406.t1 vs. uniprot
Match: A0A2V3J3U3_9FLOR (Formin-F n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3U3_9FLOR)

HSP 1 Score: 884 bits (2283), Expect = 4.770e-307
Identity = 446/626 (71.25%), Postives = 519/626 (82.91%), Query Frame = 0
Query:    1 MKGFLQTFYKKPKSSRKVTELVDGVLIALYDPETFKDDMSFALQKIHSKYGEARHVMLLDVGATGDEEWVKDILPGVLVTTPVSLGPYYLVPSLSSLFEVCADAYDWLLSGFQSGSQHIVLIITRNQLCEEYRPLTIIALVACAYMAYVCLTENGIAALEHFKHAVKDAGMCSDRQLQQDILNPNLYQYLRYFTMLRINMRFPNVRPLQVAKILVQGSVYIDDQPWNPIIRIYQAGNGDIAQCTTIMRSEEGGADVTVGTGYANFTLNDEIIAGDVVFAFEHWVPLSDVTKPLFIIARHTGFLEPPYHRVSRKDLETAPGLANKVEFDKHIEVHFFIESVDSPAGVRQDDFSEEAMVKYADKLGHDKAELIGRVADLYEVVEEIASNAPTAPPPTMQAIVQPPHAGRNGSANFMDELQQKNAEREKRLQEHQNAFDGDDLQRKAKILEQVLGFDVGTEGVDEFVQVFMQYNEEVGNDSTIDKIERQKTAKQLLSKTFIGRRGSVQTTTEVSSEDDGFSDIAKHIDEEELDEEDLEDFSVLQEKLSQKKKPESDGSGATEDSEEDEEKRDAGILREAVQVLLKGVKKTGLTDRFRADDALKNADALHDTEVNENEIITQIAGALEAL 626
            MKG  QTFYKKPK+ RKV ELVDGVLIALYDP++F+ DM  ALQKI+ KYGE R V++LDVGA   E+W +DILPGVL TTPV LGPYYLVPSLSS+FEVCADA+DWL +GF+SG QHIVLI+ RNQLCEEYRPLTIIAL+ACAYMAYV LTENGIAALEHFK  VK+ GMCSDRQ+QQDILNPNLYQYLRYFTMLRIN RFPN RPLQ+AKILVQG V IDDQPWNPIIRIYQAG  ++A CTTIM+S + G++  +GTG+ NF LNDEIIAGDV+  FEHWVPLSDVTKPLFIIARHTGFLEPPYHRV +KDL+ APG+A+K+E DK + V  F ESVD P GVR+DDFSE AM+KYA+K G  KA LIG VADLYE+VEEIA+NAP+APPPTMQAIV+P +A  N + +FMDE++QKNAEREKR+QE Q AF+G++ QRKAK+LEQV G +VG E VDEFV+VFM+YNE        DK++RQ+TA++LLSKTF GR  S     E SSE+DGFSDIAK I EEELDEE+L D S+L++KL+QK+  +S+ S        D E RDA +LREAVQVLLKGVKKTG  DRFRADD LKNAD+L++ +VNENEII+QI GAL AL
Sbjct:    1 MKGIFQTFYKKPKAHRKVAELVDGVLIALYDPDSFEADMGAALQKIYKKYGETRKVLVLDVGANDGEKWTEDILPGVLATTPVHLGPYYLVPSLSSIFEVCADAHDWLSNGFKSGLQHIVLIVARNQLCEEYRPLTIIALIACAYMAYVSLTENGIAALEHFKEIVKETGMCSDRQVQQDILNPNLYQYLRYFTMLRINRRFPNNRPLQIAKILVQGWVRIDDQPWNPIIRIYQAGRNNVAHCTTIMQSTDAGSEAAIGTGFTNFVLNDEIIAGDVIIVFEHWVPLSDVTKPLFIIARHTGFLEPPYHRVPQKDLKVAPGIASKLELDKDLGVDMFFESVDPPQGVRKDDFSEGAMIKYAEKYGDAKAGLIGHVADLYEIVEEIATNAPSAPPPTMQAIVEPTYAQGNRNVDFMDEIRQKNAEREKRIQE-QAAFEGNESQRKAKLLEQVFGCEVGVEEVDEFVEVFMRYNEATSEQHG-DKVDRQRTAEELLSKTFTGRSHSAHRAMEASSEEDGFSDIAKFIHEEELDEEELGDISLLKDKLAQKRSSDSEDSDRXXXXXXDRENRDADVLREAVQVLLKGVKKTGRADRFRADDVLKNADSLNNGDVNENEIISQITGALAAL 624          
BLAST of Gvermi12406.t1 vs. uniprot
Match: A0A1X6NQF2_PORUM (C2 tensin-type domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQF2_PORUM)

HSP 1 Score: 226 bits (577), Expect = 3.910e-62
Identity = 147/415 (35.42%), Postives = 220/415 (53.01%), Query Frame = 0
Query:    3 GFLQTFYKKPKSSRKVTELVDGVLIALY-DPETFKDDMSFALQKIHSKYGEARHVMLLDVGATGDEEWVKDILPGVLVTTPVSLGPYYLVPSLSSLFEVCADAYDWLLSGFQSGSQHIVLIITRNQLCEEYRPLTIIALVACAYMAYVCLTENGIAALEHFKHAVKDAGMCSDRQLQQDI---LNPNLYQYLRYFTMLRINMRFPNVRPLQVAKILVQGSVYIDD-QPWNPIIRIYQAGN-GDIAQCTTIMRSEEGGADVTVGTGYANFTLNDEIIAGDVVFAFEHWVPLSDVTKPLFIIARHTGFLEPPYHRVSRKDLETAPGLANKVEFDKHIEVH-FFIESVDSPAGVRQDDFSEEAMVKYADKLGHDKAELIGRVADLYEVVEEIASNAPTAPPPTMQAIVQPPHAGRNGS 410
            G LQTFYKKP   R V EL DG+   ++ D   F+ D+  +L K   +YGE   ++L+D   T    ++  +   VL +  V LGP+   PSL S++EV AD YD+L +G  +G   +VL++  N L   Y  L  +AL++ AY  Y  + ENG  AL  F    + A + +DRQL ++      PNL   + +F+ +R     P  +P+++ K+LVQGSV +     WNPI+R+Y      D  +C T++R E  G    VGT +A+F L DE++ GD V  FEHW+PL D T+PLF    HT F+  P HR+   +L+ AP +  ++  D H+ V  FF + +D    V  DD   E    +  K G      + RV +    +  +A+ APTAP      ++ P H   +G+
Sbjct:    5 GLLQTFYKKPVK-RCVVELSDGLWAGVHSDDGVFETDLRQSLVKSRKRYGELGEILLVD---TSPAPFLTSVCADVLTSHVVYLGPWAGAPSLHSVWEVVADMYDYLAAGAATGHSRVVLLVGTN-LFPGYPALAPVALLSAAYWVYTRVAENGADALSLFLSRARSARLTTDRQLLEEADGTRRPNLTALMNWFSAVRRTASLPVRKPVRLLKVLVQGSVTLHGGDAWNPIVRLYTPSKFEDAHECVTLVRRE--GEAAAVGTDFASFDL-DEVVCGDAVLVFEHWLPLVDQTRPLFSTVLHTAFVTAPCHRIGIGELDLAPDVG-ELRVDSHLAVDVFFPDDMDDEPEV--DD--TEGNAAFEKKYGAGVLHYLDRVREEASGINSLAATAPTAP------LIHPAHVSGSGA 400          
BLAST of Gvermi12406.t1 vs. uniprot
Match: R7QS05_CHOCR (Formin-like Protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS05_CHOCR)

HSP 1 Score: 205 bits (522), Expect = 9.990e-53
Identity = 121/264 (45.83%), Postives = 178/264 (67.42%), Query Frame = 0
Query:  364 GHDKAELIGRVADLYEVVEEIASNAPTAPPPTMQAIVQPPHAGRNGSANFMDELQQKNAEREKRLQEHQNAFDGDDLQRKAKILEQVLGFDVGTEGVDEFVQVFMQYNEEVGNDSTIDKIERQKTAKQLLSKTFIGRRGSVQTTTEVSSEDDGFSDIAKHIDEEELDEEDLEDFSVLQEKLSQKKKPESDGSGATEDSEEDEEKRDAGILREAVQVLLKGVKKTGLTDRFRADDALKNADALHDTEVNENEIITQIAGALEALK 627
            G + A+L+GR ADL E+V+EI + AP   P +M+AI+QP  + R  S +  +E++QKNAEREKR+QE+Q    G D QRKAK+L++    D   + VD+F++VF +Y EE+G +   D+  RQKTAK++L+KTF+ RR S Q   E SSE+DGF DIA+ IDEEELDE D+   +    + S +++ E DG+    +S   EEK+ A +L+ AVQVLL+GVK+TG T RFRADD L  +    +  +++++I++Q +   EAL+
Sbjct:    3 GVEDADLLGRAADLNEIVQEIVTRAPKVAPKSMKAIMQPQVSARTQSGDIFEEMKQKNAEREKRIQENQKILRGSDTQRKAKLLQETFDCDFEEDTVDDFIEVFKRYKEEIGIEQPGDRSSRQKTAKEVLAKTFMARRTSDQHQLEFSSEEDGFGDIARFIDEEELDEMDVLRHTSSHAQNSDEEQGEYDGN----ESASSEEKQ-ADMLKNAVQVLLRGVKQTGRTGRFRADDFLAKST---ENAIDDSDILSQFSQITEALQ 258          
The following BLAST results are available for this feature:
BLAST of Gvermi12406.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3U3_9FLOR4.770e-30771.25Formin-F n=1 Tax=Gracilariopsis chorda TaxID=44838... [more]
A0A1X6NQF2_PORUM3.910e-6235.42C2 tensin-type domain-containing protein (Fragment... [more]
R7QS05_CHOCR9.990e-5345.83Formin-like Protein n=1 Tax=Chondrus crispus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 414..434
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..556
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..435
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 504..570
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..435
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10Protein tyrosine phosphatase superfamilycoord: 47..214
e-value: 2.3E-6
score: 29.6
IPR014020Tensin phosphatase, C2 domainPROSITEPS51182C2_TENSINcoord: 205..338
score: 9.325115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4582838..4584782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12406.t1Gvermi12406.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4582838..4584782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12406.t1 ID=Gvermi12406.t1|Name=Gvermi12406.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=628bp
MKGFLQTFYKKPKSSRKVTELVDGVLIALYDPETFKDDMSFALQKIHSKY
GEARHVMLLDVGATGDEEWVKDILPGVLVTTPVSLGPYYLVPSLSSLFEV
CADAYDWLLSGFQSGSQHIVLIITRNQLCEEYRPLTIIALVACAYMAYVC
LTENGIAALEHFKHAVKDAGMCSDRQLQQDILNPNLYQYLRYFTMLRINM
RFPNVRPLQVAKILVQGSVYIDDQPWNPIIRIYQAGNGDIAQCTTIMRSE
EGGADVTVGTGYANFTLNDEIIAGDVVFAFEHWVPLSDVTKPLFIIARHT
GFLEPPYHRVSRKDLETAPGLANKVEFDKHIEVHFFIESVDSPAGVRQDD
FSEEAMVKYADKLGHDKAELIGRVADLYEVVEEIASNAPTAPPPTMQAIV
QPPHAGRNGSANFMDELQQKNAEREKRLQEHQNAFDGDDLQRKAKILEQV
LGFDVGTEGVDEFVQVFMQYNEEVGNDSTIDKIERQKTAKQLLSKTFIGR
RGSVQTTTEVSSEDDGFSDIAKHIDEEELDEEDLEDFSVLQEKLSQKKKP
ESDGSGATEDSEEDEEKRDAGILREAVQVLLKGVKKTGLTDRFRADDALK
NADALHDTEVNENEIITQIAGALEALK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like
IPR014020Tensin_C2-dom