Gvermi12398.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12398.t1
Unique NameGvermi12398.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length149
Homology
BLAST of Gvermi12398.t1 vs. uniprot
Match: A0A2V3J3Q7_9FLOR (50S ribosomal protein L14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Q7_9FLOR)

HSP 1 Score: 236 bits (603), Expect = 5.510e-78
Identity = 124/131 (94.66%), Postives = 128/131 (97.71%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRATLFSTLA 131
            MVQMRTVLRVADNSGAKTVRCINILRR+RQRPSGNVGSELVVSVTANDRSVT KKAKKGEIHRALVIRSKNEPLR DGGF+R GETAA+LLNA+GAPLGTRIRGPVSAALDRKRFLKVLSLSRATLFSTLA
Sbjct:    1 MVQMRTVLRVADNSGAKTVRCINILRRQRQRPSGNVGSELVVSVTANDRSVTNKKAKKGEIHRALVIRSKNEPLRKDGGFMRTGETAAILLNADGAPLGTRIRGPVSAALDRKRFLKVLSLSRATLFSTLA 131          
BLAST of Gvermi12398.t1 vs. uniprot
Match: R7QR53_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR53_CHOCR)

HSP 1 Score: 218 bits (556), Expect = 1.490e-70
Identity = 113/135 (83.70%), Postives = 125/135 (92.59%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEG-APLGTRIRGPVSAALDRKRFLKVLSLSRATLFSTLAGRT 134
            MVQMRTVLRVADNSGAKTVRCINILRR+RQRPSGNVGSELVVSVTANDRSV TKK +KGE+HRALV+R+KNEPLR DGGFVR G+TAA+LLNA+G AP+ TRIRGPVSAALDRKR+LKVLSL+R +LFST A  T
Sbjct:    1 MVQMRTVLRVADNSGAKTVRCINILRRRRQRPSGNVGSELVVSVTANDRSVKTKKVRKGEVHRALVVRAKNEPLRRDGGFVRTGDTAAILLNADGTAPVATRIRGPVSAALDRKRYLKVLSLARVSLFSTAAAHT 135          
BLAST of Gvermi12398.t1 vs. uniprot
Match: A0A1X6P343_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P343_PORUM)

HSP 1 Score: 135 bits (341), Expect = 3.160e-38
Identity = 83/150 (55.33%), Postives = 102/150 (68.00%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRM--GETAAVLL--NAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRATLFSTLAGRTKGDVSRPGVITR 146
            MVQ+RTVLRVADNSGA+ VR I +LRR+R RP+   GS L VSV   D +V  KK  KGE+H AL++R+ +E  R DGG+VRM  G +AAVLL       PLG+R+RGPVSAAL R   +KVLSL+RA L ST+A         PGV+ R
Sbjct:    1 MVQVRTVLRVADNSGAQLVRVIGVLRRRRGRPTATTGSLLSVSVIKTDPAVKVKKVAKGEVHTALLVRTADERPRADGGWVRMPSGGSAAVLLARGTADTPLGSRVRGPVSAALRRDGNVKVLSLARAALMSTVAA--------PGVVRR 142          
BLAST of Gvermi12398.t1 vs. uniprot
Match: A0A5J4Z4W1_PORPP (50S ribosomal protein L14 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4W1_PORPP)

HSP 1 Score: 112 bits (279), Expect = 4.740e-29
Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = 0
Query:    2 VQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRATL 126
            +QM T LRVADNSGA+ V  I ++R +R+  +G VG E+V S+   D     KK KKGE+HRA+V+R K E  R DG  +R  + AA LL   G P+GTRIRG VS+ LDR +++K++SL R  +
Sbjct:    6 IQMMTRLRVADNSGARVVGVIRVMRVRRR--TGTVGDEVVCSIKEADPGA--KKVKKGEVHRAVVVRGKVEDARRDGSTMRCSDWAAALLGPNGQPIGTRIRGVVSSNLDRSKYMKIMSLCRVII 126          
BLAST of Gvermi12398.t1 vs. uniprot
Match: A0A7C4WNM3_9PROT (50S ribosomal protein L14 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C4WNM3_9PROT)

HSP 1 Score: 109 bits (273), Expect = 3.420e-28
Identity = 56/122 (45.90%), Postives = 85/122 (69.67%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLS 122
            M+QM+TVL VADNSGAK V C+ +L   R+R + ++G  +VVS+     ++   K KKG++HRA+++R++ E  R DG ++R    AAVL+N +G P+GTRI GPV+  L  K F+K++SL+
Sbjct:    1 MIQMQTVLDVADNSGAKKVFCVKVLGGSRRRYA-SLGDVIVVSIR---EALPASKVKKGDVHRAVIVRTRKEVRRTDGSYIRFDTNAAVLINPQGEPIGTRIFGPVARELRGKNFMKIISLA 118          
BLAST of Gvermi12398.t1 vs. uniprot
Match: A0A537N5N7_9PROT (50S ribosomal protein L14 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N5N7_9PROT)

HSP 1 Score: 108 bits (269), Expect = 1.380e-27
Identity = 60/126 (47.62%), Postives = 83/126 (65.87%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRATL 126
            M+QMRT L VADNSGAKTV+CI +L   R R   ++G  +VVSV     ++  +  KKGE+HRA+V+R+     R DG  +R    AAVL+N +G P+GTRI GPV+  L  K+F+K++SL+   L
Sbjct:    1 MIQMRTNLDVADNSGAKTVQCIKVLGGSR-RKYASIGDIIVVSVKV---ALPRRGVKKGEVHRAVVVRTSFPLRRGDGSAIRFDRNAAVLINKQGEPIGTRISGPVTRELRAKKFMKIISLAPEVL 122          
BLAST of Gvermi12398.t1 vs. uniprot
Match: A0A2E7PNH7_9PROT (50S ribosomal protein L14 n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7PNH7_9PROT)

HSP 1 Score: 108 bits (269), Expect = 1.380e-27
Identity = 57/126 (45.24%), Postives = 86/126 (68.25%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRATL 126
            M+QM+T L VADNSGA+ V+CI +L   ++  +G VG  +VVSV     ++   + KKGEIHRA+++R+K +  R+DG  +R    AAVL+N +G P+GTRI GPV+  L  +R++K++SL+   L
Sbjct:    1 MIQMQTNLEVADNSGARRVQCIKVLGGSKRMTAG-VGDVIVVSVK---EAIPRGRVKKGEIHRAVIVRTKKDISRSDGSTIRFDSNAAVLINPQGEPIGTRIFGPVTRELRARRYMKIISLAPEVL 122          
BLAST of Gvermi12398.t1 vs. uniprot
Match: I0IMU8_LEPFC (50S ribosomal protein L14 n=9 Tax=Leptospirillum TaxID=179 RepID=I0IMU8_LEPFC)

HSP 1 Score: 107 bits (268), Expect = 1.950e-27
Identity = 55/122 (45.08%), Postives = 85/122 (69.67%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLS 122
            M+Q+RT+L VADNSGAK V C +++   R R   ++G  +VVSV     + T KK   G++ +A+V+R+  E  R+DG ++R  + AAVL+NA+G P+GTRI GPV+  L +++F+K+LSL+
Sbjct:    1 MIQLRTILEVADNSGAKKVMCFHVMGGSR-RAYAHLGDTIVVSVKEATPNATVKK---GDVAKAVVVRTVKEARRDDGSYIRFDQNAAVLINAQGEPIGTRIFGPVARELRKRKFMKILSLA 118          
BLAST of Gvermi12398.t1 vs. uniprot
Match: A0A2E3XBS5_9PROT (50S ribosomal protein L14 n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A2E3XBS5_9PROT)

HSP 1 Score: 107 bits (268), Expect = 1.950e-27
Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRATL 126
            M+QM+T L VADNSGA+ V+CI +L   +   +G VG  +VV+V     ++   + KKGEIHRAL++R+K++  R DG  +R    AAVLL+ +G P+GTRI GPV+  L  KR++K++SL+   L
Sbjct:    1 MIQMQTNLSVADNSGARRVQCIKVLGGSKHMTAG-VGDVIVVTVK---EAIPRGRVKKGEIHRALIVRTKSDIQREDGSIIRFDRNAAVLLDPQGEPIGTRIFGPVTRELRAKRYMKIVSLAPEVL 122          
BLAST of Gvermi12398.t1 vs. uniprot
Match: A0A1L6MY38_9DELT (50S ribosomal protein L14 n=1 Tax=Pajaroellobacter abortibovis TaxID=1882918 RepID=A0A1L6MY38_9DELT)

HSP 1 Score: 107 bits (266), Expect = 3.920e-27
Identity = 59/126 (46.83%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    1 MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRSVTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGTRIRGPVSAALDRKRFLKVLSLSRATL 126
            M+QMRT L VADNSGAK V+CI +L   R+R +G +G  ++V+V     ++   K KKG+I RA+V+R+K++  R DG  +R    +AVL+N EG P+GTRI G V+  L  K+F+K+LSL+   L
Sbjct:    1 MIQMRTKLEVADNSGAKQVQCIKVLGGSRRRYAG-IGDTIIVAVK---EALPGTKIKKGDIARAVVVRTKDQVTRPDGSCIRFNRNSAVLINKEGEPIGTRIFGSVARELRSKKFMKILSLAPEVL 122          
The following BLAST results are available for this feature:
BLAST of Gvermi12398.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3Q7_9FLOR5.510e-7894.6650S ribosomal protein L14 n=1 Tax=Gracilariopsis c... [more]
R7QR53_CHOCR1.490e-7083.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P343_PORUM3.160e-3855.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z4W1_PORPP4.740e-2948.8050S ribosomal protein L14 n=1 Tax=Porphyridium pur... [more]
A0A7C4WNM3_9PROT3.420e-2845.9050S ribosomal protein L14 n=1 Tax=Proteobacteria b... [more]
A0A537N5N7_9PROT1.380e-2747.6250S ribosomal protein L14 n=1 Tax=Alphaproteobacte... [more]
A0A2E7PNH7_9PROT1.380e-2745.2450S ribosomal protein L14 n=4 Tax=Alphaproteobacte... [more]
I0IMU8_LEPFC1.950e-2745.0850S ribosomal protein L14 n=9 Tax=Leptospirillum T... [more]
A0A2E3XBS5_9PROT1.950e-2746.0350S ribosomal protein L14 n=4 Tax=Proteobacteria T... [more]
A0A1L6MY38_9DELT3.920e-2746.8350S ribosomal protein L14 n=1 Tax=Pajaroellobacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 1..126
e-value: 2.4E-39
score: 146.7
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 1..124
e-value: 2.1E-34
score: 118.1
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 2..122
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 1..126
score: 21.074131
IPR005745Ribosomal protein L14P, bacterial-typeTIGRFAMTIGR01067TIGR01067coord: 1..123
e-value: 7.3E-34
score: 114.3
IPR036853Ribosomal protein L14 superfamilyGENE3D2.40.150.20Ribosomal protein L14coord: 1..126
e-value: 3.5E-35
score: 122.9
IPR036853Ribosomal protein L14 superfamilySUPERFAMILY50193Ribosomal protein L14coord: 1..124
NoneNo IPR availablePANTHERPTHR11761:SF1850S RIBOSOMAL PROTEIN HLP, MITOCHONDRIALcoord: 2..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4557824..4558270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12398.t1Gvermi12398.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4557824..4558270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12398.t1 ID=Gvermi12398.t1|Name=Gvermi12398.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=149bp
MVQMRTVLRVADNSGAKTVRCINILRRKRQRPSGNVGSELVVSVTANDRS
VTTKKAKKGEIHRALVIRSKNEPLRNDGGFVRMGETAAVLLNAEGAPLGT
RIRGPVSAALDRKRFLKVLSLSRATLFSTLAGRTKGDVSRPGVITRLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000218Ribosomal_L14P
IPR005745Ribosomal_L14P_bac-type
IPR036853Ribosomal_L14_sf