Gvermi12311.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12311.t1
Unique NameGvermi12311.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length288
Homology
BLAST of Gvermi12311.t1 vs. uniprot
Match: R7Q908_CHOCR (Protein YIPF n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q908_CHOCR)

HSP 1 Score: 374 bits (960), Expect = 9.260e-128
Identity = 199/287 (69.34%), Postives = 230/287 (80.14%), Query Frame = 0
Query:   10 PLSAAALDASYAPVSTG-----------ESSSANQFALYDDGVSDDGADTGRWESEPAGTRSEPRFYHPRFYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSVEFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVGSHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLNLWRDVSVQHRSLTYFVRLIAVLAHAAVGTALIFIFF 285
            P +A   +ASYAPV+T              SSAN F LYD  V +DGA+TG WESEP GTRSEPRF+ PRFYAAYFDI ++DLA+RLFRA LP KPLLGW D DE+  GGTSVPDLY PVWVTTTLVLALSMG+K AEFLANVFRKKET  L PSI S+EFSRLW+AAS+LY YVFVFPV+LT+FQCLFAKR++ + +   HP++GTVMVYGYS+ PVVVAA VAT+PI   QI +M VAF IGA VI+LNLWRDVS++H+SLTYFVRLIAV AHAAVG  +IFIF+
Sbjct:   12 PAAANPFEASYAPVTTAPGGYVATPAPPSKSSANPFELYDANVDEDGAETGNWESEPTGTRSEPRFWQPRFYAAYFDITISDLASRLFRAFLPCKPLLGWADSDEELEGGTSVPDLYGPVWVTTTLVLALSMGSKMAEFLANVFRKKET-QLKPSIESLEFSRLWKAASLLYGYVFVFPVILTVFQCLFAKRALGERA---HPVLGTVMVYGYSLVPVVVAALVATIPIEMVQIIAMCVAFSIGAAVIVLNLWRDVSIEHKSLTYFVRLIAVGAHAAVGAGVIFIFY 294          
BLAST of Gvermi12311.t1 vs. uniprot
Match: A0A1X6PA42_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PA42_PORUM)

HSP 1 Score: 171 bits (432), Expect = 1.320e-47
Identity = 113/281 (40.21%), Postives = 153/281 (54.45%), Query Frame = 0
Query:   31 ANQFALYDDGVSDDGADTGRWESEPAGTRSEPRFYHPRFYAAYFDINVADLATRLFRALLPYKPLLGWTDVDE-DQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSVEFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVGSHPLVGT-----------------------VMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLNLWRDVSVQHRSLTYFVRLIAVLAHAAVGTALIFIFFLR 287
            AN FALY+    D GA +G WE+  AG RS PR +  R+YA  FD+   D+A RL  A +P  PLLGW  V E D  GG  +PDLY  VWVTTTLVL+LSM +  + FL  VF+++E   L      V+   L  AA ++Y YVF  P+V    +CL     +  +  G  PL G                        V VYGYSMTPVVVAA+V T+P+R  Q+ +M  AF +  + +M NLWR  ++   +  + VR+ A L H  +G  L+++F+ R
Sbjct:   58 ANPFALYEG--EDGGASSGVWEAPAAGRRSAPRPWQLRYYAPAFDVTTGDVARRLACACVPVTPLLGWGAVGEVDAAGGNGLPDLYGAVWVTTTLVLSLSMASSASAFLRGVFKQQEVTGLVHG--GVDVRVLASAAGLVYPYVFFAPLVWHAVRCL-----VPSAGSGGAPLGGPARDAAGGLGGDLDEEGRPSLTVGVCVYGYSMTPVVVAAWVCTVPVRAVQLGAMGGAFALSTWFVMFNLWRGEAMGGGA-RWSVRVAAGLVHGGLGLLLVWLFYWR 328          
BLAST of Gvermi12311.t1 vs. uniprot
Match: A0A7S1TDT9_9RHOD (Protein YIPF (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDT9_9RHOD)

HSP 1 Score: 164 bits (416), Expect = 1.150e-46
Identity = 87/193 (45.08%), Postives = 122/193 (63.21%), Query Frame = 0
Query:   40 GVSDDGADTGR-WESEPAGTRSEPRFYHPRFYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSVEFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVGSHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQ 231
            G  DD A+  R W+ EPAGTR EPRFY   +YAA+FD+ + D   RLFRA+LP +PLL W D D D+  G   PDLY P+W+TTTLVLALS+G+  AEF  N+F+ +E+     +++ V+F  LWRA+++L+ YV   P VL L +     ++         P + +V +YGYS  P+ VA+ VA +P+R  Q
Sbjct:   33 GEEDDDAEQIRGWDQEPAGTRREPRFYEVGYYAAFFDVTMTDFLVRLFRAVLPIRPLLDWIDEDVDEAEG---PDLYGPLWITTTLVLALSVGSNFAEFCRNIFQMQES----QAVAGVDFRNLWRASAILFGYVLAAPFVLLLMRLCATVKA---------PFLDSVCIYGYSYVPICVASIVAIVPLRVVQ 209          
BLAST of Gvermi12311.t1 vs. uniprot
Match: A0A5J4Z3T7_PORPP (Protein YIPF n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3T7_PORPP)

HSP 1 Score: 88.6 bits (218), Expect = 1.540e-16
Identity = 65/208 (31.25%), Postives = 96/208 (46.15%), Query Frame = 0
Query:   47 DTGRWESEPAGTRSEPRFYHPRFYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSVEFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVG-SHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLNLWRD 253
            DT    S P  + +   +Y   FY +YF ++  D+  RL  +LLP   L  +     DQ      PDLY P WVTTTL++A S+G+       ++        L P    + F+    AA+V Y YV +  V +            T+  VG +  L  TV +YGYS+T ++ A  +   P  T    S+A+ F I    ++ NLWRD
Sbjct:   91 DTSGSSSRPTDSSTPSTWYQVGFYTSYFAVHADDVMCRLKNSLLPIHSL--YVGCSSDQ------PDLYGPFWVTTTLIMATSVGSNLFLLFRSLLPHPGAQQL-PEYLPINFATFGMAATVFYLYVGIMSVAVWA----------TRKYVGLASSLASTVCLYGYSLTALIPAVVICAGPSSTLVWISLALGFAISIGFLLQNLWRD 279          
BLAST of Gvermi12311.t1 vs. uniprot
Match: A0A3B3SE05_9TELE (Protein YIPF n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SE05_9TELE)

HSP 1 Score: 73.9 bits (180), Expect = 1.560e-11
Identity = 57/207 (27.54%), Postives = 99/207 (47.83%), Query Frame = 0
Query:   56 AGTRSEPRFYHPRFYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSV-EFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVGSHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLNLWRDVSVQHRSL 261
            AG +    F+   +Y  +FD+    +  R+  ++LP      W   +  ++   + PDLY P W+  TLV A+++    + FL  + R        PS   V EFS++  AA+ +Y Y ++ P++L  F      R+    +V S+  +  V VYGYS+   + AA +  +P  + +  S+ VA  +   V++L  W  V   HR +
Sbjct:   66 AGQKKSAPFWTFEYYQTFFDVETYQVLDRIKGSILP------WPGKNFVRLYVRNNPDLYGPFWICATLVFAIAISGNISSFLLCLGR--------PSHRYVPEFSKVTLAATAIYSYAWLVPLILWGFLL---WRNSRVMNVVSYSFLEIVCVYGYSLFVFIPAAVLWIIPSESVRWLSILVAMCLSGSVLVLTFWPAVRDDHRRI 255          
BLAST of Gvermi12311.t1 vs. uniprot
Match: R4X7U2_TAPDE (Protein YIP n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4X7U2_TAPDE)

HSP 1 Score: 67.0 bits (162), Expect = 3.200e-9
Identity = 63/230 (27.39%), Postives = 103/230 (44.78%), Query Frame = 0
Query:   69 FYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSVEFSRLWRAASVLYFYVFVFPV----VLTLFQCLFAKRSITQSSVGSHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASM---------AVAFGIGAFVIMLNLWRDVSVQHRSLTYFVRLIAVLAHAAVGTALIFIFF 285
            +Y+ +F+++   +  RL  AL P K          + V G   PDLYAP+W+ TT++  L   +  A +LA+         ++    + +FS L  AA+++Y Y F+ PV    VL  +QC                L+ TV +YGYS    V  +F++  P+     A++         AV F I    ++ NL   V+      +  + +  VL H A   A+ F+FF
Sbjct:   75 YYSQFFNVSSDSVLDRLLNALFPMKNFF-------EIVNGQ--PDLYAPIWLATTVITVLYFASTVAGYLAS--------HISHQPYAYQFSTLTSAATLIYGYTFITPVLAWGVLRWYQC-------------EPSLLETVSLYGYSNAAWVPVSFISISPLEFFHYATLSNWIRWIAVAVGFSISVAFLIRNLLPVVNRADAKTSQLMVVGVVLLHIAFSLAIKFLFF 274          
BLAST of Gvermi12311.t1 vs. uniprot
Match: A0A058Z7U4_FONAL (Uncharacterized protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z7U4_FONAL)

HSP 1 Score: 66.2 bits (160), Expect = 3.880e-9
Identity = 62/223 (27.80%), Postives = 95/223 (42.60%), Query Frame = 0
Query:   64 FYHPRFYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSV-EFSRLWRAASVLYFYVFVFPV-VLTLFQCLFAKRSITQSSVGSHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLNLWRDVSVQHRSLTYFVRLIAVLAHAAVGTALIFIF 284
            FY   FY  YFD++ AD+ +R+  ALLPY+P    T V    +      DLY P WV+TT++  L      A  +         A   P+   V +F+ L  AA+ +Y Y+ + P+ V  +F+    K S          LV    + GY ++  +  + +  LP    +     V F I    +  N+W   S      T  + +   LA    G AL+F F
Sbjct:   31 FYKIEFYQQYFDVDTADVGSRILHALLPYRPNFLTTVVPPGAL------DLYGPFWVSTTVIFVLFAIGNLAHSIK--------AFADPNYEFVPDFTTLPWAATTIYLYILLVPLAVWGIFRYFDTKLS----------LVRLYSLIGYGLSVFIPISIICVLPWEIVKWVCTGVLFLITTLFMTSNIWVAASAAGARSTILLSVCGGLAAINAGIALLFKF 229          
BLAST of Gvermi12311.t1 vs. uniprot
Match: A0A3N4IP60_ASCIM (Protein YIP n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4IP60_ASCIM)

HSP 1 Score: 66.6 bits (161), Expect = 3.920e-9
Identity = 62/217 (28.57%), Postives = 92/217 (42.40%), Query Frame = 0
Query:   69 FYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSVEFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVGSHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLNLWRDVSVQHRSLTYFVRLIAVLAHAAVGTALIFIFF 285
            FYA +FD+N  DL  R   AL P    L       D + G   PDLY P+W+TTT+VL L +       LA+ F   E     P     +F  L  AA ++Y Y F+ PV L             +   G   ++    +YGY+    +  A  +   I       +A+ F + A  +  NL+  VS         + ++AV AHA +   +  +FF
Sbjct:   71 FYAQFFDLNTNDLLVRCKAALYPKANFL-------DVIDGN--PDLYGPIWITTTVVLVLFLTGT----LAHYFNGGEL----PGGGKYDFRLLTGAAGLMYGYTFIIPVALW---------GALKWWGGEAGILEVACLYGYANLVWIPVAVGSISTITILNYVFVALGFAMSATFLFRNLFPIVSSTDAKTAKMLLIVAVAAHAGLAITIKILFF 261          
BLAST of Gvermi12311.t1 vs. uniprot
Match: A0A7R9KK13_9ACAR (Protein YIPF (Fragment) n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KK13_9ACAR)

HSP 1 Score: 65.9 bits (159), Expect = 8.380e-9
Identity = 63/243 (25.93%), Postives = 118/243 (48.56%), Query Frame = 0
Query:   52 ESEPAGTRSEPRFYHPRFYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISS-----VEFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVGSHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLN----LWRDVSVQHRSLTYFVRLIAVLAHAAVGTALIFIFF 285
            ES+P G  S   F+   F+  YFD+    + +R+  + +P         +D         PDLY P+W++TTLV A ++    A ++      K  A+++P+ ++      +++++  AAS ++ YV   PV L     LF  R  + +    + L+ T+ VYGYS++  V  + +  + IR  Q+  +++   +   V++L     +  D S   +S +Y + +I +L HA +  A +  FF
Sbjct:   63 ESQPKG--SSAGFWQMEFFGQYFDVTTDQVLSRILWSSIPVYGSKKGNYLDRHI---HLTPDLYGPLWISTTLVFATAICGNIANYV------KAMATISPNSTTDDEWHYDYAKVGLAASTIFTYVMAVPVCLWF---LFWFRGCSAN----YSLLETICVYGYSLSIYVPISILWVINIRFIQLILLSIGAILSGSVLVLVFAPVVHSDPSKTIKS-SYLILIIIILMHAFLAFAFLEYFF 286          
BLAST of Gvermi12311.t1 vs. uniprot
Match: A0A4S2N223_9PEZI (Protein YIP n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N223_9PEZI)

HSP 1 Score: 64.3 bits (155), Expect = 3.160e-8
Identity = 61/235 (25.96%), Postives = 99/235 (42.13%), Query Frame = 0
Query:   55 PAGTRSEPRFYHP----RFYAAYFDINVADLATRLFRALLPYKPLLGWTDVDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASLAPSISSVEFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVGSHPLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLNLWRDVSVQHRSLTYFVRLIAVLAHAAVGTALIFIFF 285
            P+ + S P   H      FYA YFD++ + +  R   AL+P    L       D + G   PDLY P+W+TT++VL L + +  A++ A   R  E         + +F+ L  AA ++Y Y F+ P  L +         +    V S  L+    +YGY+    +  A  +  PI       + V        +  NL+  VS         + ++ V  HA +  A+  +FF
Sbjct:   60 PSNSTSTPSGKHHLFTLSFYAQYFDVDTSTVLHRCRSALIPRTNFL-------DIIDGN--PDLYGPIWITTSVVLMLFLASTLAQYFA---RFGEEGDGGGKRYTYDFTLLSGAAGMMYGYTFIVPAALWV--------VLRWWGVESANLLELACLYGYANLVWLPVAVASVSPITILNWVFVGVGLASSGLFLFRNLYPVVSATDHRTAKILLIVVVALHAGLALAIKILFF 274          
The following BLAST results are available for this feature:
BLAST of Gvermi12311.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
R7Q908_CHOCR9.260e-12869.34Protein YIPF n=1 Tax=Chondrus crispus TaxID=2769 R... [more]
A0A1X6PA42_PORUM1.320e-4740.21Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TDT9_9RHOD1.150e-4645.08Protein YIPF (Fragment) n=1 Tax=Compsopogon caerul... [more]
A0A5J4Z3T7_PORPP1.540e-1631.25Protein YIPF n=1 Tax=Porphyridium purpureum TaxID=... [more]
A0A3B3SE05_9TELE1.560e-1127.54Protein YIPF n=1 Tax=Paramormyrops kingsleyae TaxI... [more]
R4X7U2_TAPDE3.200e-927.39Protein YIP n=1 Tax=Taphrina deformans (strain PYC... [more]
A0A058Z7U4_FONAL3.880e-927.80Uncharacterized protein n=1 Tax=Fonticula alba Tax... [more]
A0A3N4IP60_ASCIM3.920e-928.57Protein YIP n=1 Tax=Ascobolus immersus RN42 TaxID=... [more]
A0A7R9KK13_9ACAR8.380e-925.93Protein YIPF (Fragment) n=1 Tax=Medioppia subpecti... [more]
A0A4S2N223_9PEZI3.160e-825.96Protein YIP n=1 Tax=Ascodesmis nigricans TaxID=341... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039765Protein Yip5/YIPF1/YIPF2PANTHERPTHR12822UNCHARACTERIZEDcoord: 40..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 252..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..251
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 224..228
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..286
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 287..287
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 203..225
NoneNo IPR availableTMHMMTMhelixcoord: 264..286
NoneNo IPR availableTMHMMTMhelixcoord: 232..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4166026..4166889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12311.t1Gvermi12311.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4166026..4166889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12311.t1 ID=Gvermi12311.t1|Name=Gvermi12311.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=288bp
MTASGASSAPLSAAALDASYAPVSTGESSSANQFALYDDGVSDDGADTGR
WESEPAGTRSEPRFYHPRFYAAYFDINVADLATRLFRALLPYKPLLGWTD
VDEDQVGGTSVPDLYAPVWVTTTLVLALSMGAKCAEFLANVFRKKETASL
APSISSVEFSRLWRAASVLYFYVFVFPVVLTLFQCLFAKRSITQSSVGSH
PLVGTVMVYGYSMTPVVVAAFVATLPIRTAQIASMAVAFGIGAFVIMLNL
WRDVSVQHRSLTYFVRLIAVLAHAAVGTALIFIFFLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039765Yip5/YIPF1/YIPF2