Gvermi12288.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12288.t1
Unique NameGvermi12288.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length295
Homology
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BLAST of Gvermi12288.t1 vs. uniprot
Match: A0A1X6NL88_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL88_PORUM)

HSP 1 Score: 99.8 bits (247), Expect = 4.510e-20
Identity = 53/121 (43.80%), Postives = 73/121 (60.33%), Query Frame = 0 
Query:    3 PALRDIFRHECVLWGSKRLNAPVGHVMYIVQDTPKGTIVADHTMSNFYRVLGITKSPAALLRQCKLKLPAATRITALPFRGVLVCDGLLSGHASPVISNKKKKVLKRRYALAKEAGSIVTG 123
            P    + R E   WG+ RLNA  G  M +++DT +G++VAD   + FY V+G+  SPA  L +    LP  TR+TALPFRGVLV DGL+SG   PV   +  + L+  Y  A  AG+++TG
Sbjct:   96 PPFDAVCRAESGAWGTTRLNAKPGEQMTVLKDTDRGSVVADAAGTTFYLVVGLRVSPATALTRAGFTLPFQTRLTALPFRGVLVYDGLVSGRPVPVRGAQAAR-LEAAYEAALAAGTVITG 215
The following BLAST results are available for this feature:
BLAST of Gvermi12288.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1X6NL88_PORUM4.510e-2043.80Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4100856..4101740 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12288.t1Gvermi12288.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4100856..4101740 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12288.t1 ID=Gvermi12288.t1|Name=Gvermi12288.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=295bp
MQPALRDIFRHECVLWGSKRLNAPVGHVMYIVQDTPKGTIVADHTMSNFY
RVLGITKSPAALLRQCKLKLPAATRITALPFRGVLVCDGLLSGHASPVIS
NKKKKVLKRRYALAKEAGSIVTGFDTQQLSNCAPQRSAHVSDATTRSRTL
ERDAESSLSCAQTERAVSGHITQQLKRLAAFEHREGLTGFHRFGYTEATN
PGHVVTIISESSIRAVFRTAHVRPMATEIVDQMVLLAERQGFVFSFVVVD
DRQLVGELNSITEQVGVLAAFYPPPSVEESTFSTMCGGRLPYVS*
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