Gvermi12282.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12282.t1
Unique NameGvermi12282.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length384
Homology
BLAST of Gvermi12282.t1 vs. uniprot
Match: A0A2V3J073_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J073_9FLOR)

HSP 1 Score: 480 bits (1236), Expect = 3.660e-166
Identity = 237/332 (71.39%), Postives = 283/332 (85.24%), Query Frame = 0
Query:   46 PSSTAKLVDEDVQRETTSGEQGDETPHRAVTEPSFRKMENPEEDPLDAPIEPLVELPVLTKEQIKALRFDPKSRSDDVIEYFADAQKRDDFAEVIVANRDFVTENVLYRFTSAILQVEARAHDLETKEEEARNMRKLRKDLIAHCWSLDFPLKVGVQLAEERLLKVLKGGNIKSDVGRYCGSSTIEVDSLWIVIFAAVAAWEERGRENPELANVDMQKSLALAADACKTLKVVNDYLSPSLKAVQDILMSADPEVQRKVVADFDDETIAEIGSFTEKIRLLPTPAYGALVRRLKSIRDYVRSEKYGIEPPTLEPFRFIPDEIKRQSKLTTLS 377
            P +++   DED+QRE  SG  GD TPHRA  EPSFR++ENPE+DPLDAP EPL  LP LT+E+I ALRFD KS  D+VIEYFADA++  DF  ++VANRDFVTENVLYRFTSAILQV+ R  ++ET+EEEARNMR+LRK+LIAHCWS DF LK+GVQ AE RLL VLKGGNIKSDV RYCG +T++VDS WIV+FAAVAAWEERGREN ELANVDMQKSLA+AADACKTL  VN YLSPSLKAVQ+IL S DP+VQ  VVA+ DDETIA++ +FTE++RLLPTPAYGALVRRL+SIRDY+R+++YGIEP  LEPFRF+P E++R+S+L + +
Sbjct:   83 PKTSSASADEDLQREKASGASGDATPHRATAEPSFRQLENPEQDPLDAPTEPLTPLPQLTREEISALRFDVKSTPDEVIEYFADARRSKDFEAIVVANRDFVTENVLYRFTSAILQVDTRDKNIETREEEARNMRQLRKELIAHCWSYDFLLKLGVQKAEARLLNVLKGGNIKSDVDRYCGRTTMDVDSFWIVVFAAVAAWEERGRENEELANVDMQKSLAVAADACKTLPSVNRYLSPSLKAVQNILTSTDPDVQTNVVAELDDETIAQLCTFTEQVRLLPTPAYGALVRRLRSIRDYIRADRYGIEPTYLEPFRFVPAEVRRESRLVSFT 414          
BLAST of Gvermi12282.t1 vs. uniprot
Match: R7QF76_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF76_CHOCR)

HSP 1 Score: 358 bits (920), Expect = 5.980e-119
Identity = 197/367 (53.68%), Postives = 259/367 (70.57%), Query Frame = 0
Query:   21 RASKSKRVSAGNTSSTETGGFAAK--QPSSTAKLVDEDVQRETTSGEQGDETPHRAVTE-PSFRKMENPEE-DPLDAPIEPLVELPVLTKEQIKALRFDPKSRSDDVIEYFADAQKRDDFAEVIVANRDFVTENVLYRFTSAILQVEARAHDLETKEEEARNMRKLRKDLIAHCWSLDFPLKVGVQLAEERLLKVLKGGNIKSDVGRYCGSSTIEVDSLWIVIFAAVAAWEERGRENPELANVDMQKSLALAADACKTLKVVNDYLSPSLKAVQDILMSADPEVQRKVVADFDDETIAEIGSFTEKIRLLPTPAYGALVRRLKSIRDYVRSEKYGIEPPTLEPFRFIPDEIKRQSKLTTLSDTKRSV 383
            RA+KSKR S    +S    G   +  +P   AK        E+ SG  GD +PHRA+ + P+   ME+P + DPLD P + LV +P LTK+ I +LRFD K   D++IE F DA++ D FA  ++ANR FV+E +LYRFTSAILQVE+R    ETKEEEA NMR+ R+DLIAHCWS D+PLKV +Q AE RLL+VL+G +IK+DV R CG++T++VD+ WIV+FAA+AAWEERG+ENPEL NVDMQK+L   A AC+TL  VN  LSPSL AVQ IL SADP VQ++VVA+ DD+ +A++ SF E++RL P+ AYGALV R+ SI DY+ ++KYGI    L+PFRF     + +SKL T +   + +
Sbjct:   12 RAAKSKRPSGSGFASNPRRGSEKEGGRPKDAAKAT----VVESASGATGDASPHRALVDGPASATMEDPAKVDPLDGPDKALVPIPSLTKDDIASLRFDRKLSLDEMIERFEDARRGDTFAATVIANRHFVSEKLLYRFTSAILQVESRTDRAETKEEEAANMRQFRQDLIAHCWSNDYPLKVELQRAEGRLLRVLQGDSIKNDVRRNCGTTTLQVDAFWIVVFAAIAAWEERGKENPELVNVDMQKALTTCAQACRTLDEVNKRLSPSLAAVQKILESADPNVQQEVVAELDDDDVADMSSFAEQVRLFPSGAYGALVVRMSSILDYIMADKYGIAAVGLQPFRFEVPTKEIESKLVTFAKNSQKI 374          
BLAST of Gvermi12282.t1 vs. uniprot
Match: A0A7S1XF24_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF24_9RHOD)

HSP 1 Score: 114 bits (286), Expect = 1.330e-24
Identity = 77/277 (27.80%), Postives = 131/277 (47.29%), Query Frame = 0
Query:   97 PLVELPVLTKEQIKALRFDPKSRSDDVIEYFADAQKRDDFAEVIVANRDFVTENVLYRFTSAILQVEARAHDLETKEEEARNMRKLRKDLIAHCWSLDFPLKVGVQLAEERLLKVLKGGNIKSDVGRYCGSSTIEVDSLWIVIFAAVAAWEERGRENPELANVDMQKSLALAADACKTLKVVNDYLSPSLKAVQDILMSADPEVQRKVVADFDDETIAEIGSFTEKIRLLPTPAYGALVRRLKSIRDYVRSEKYGIEPPTLEPFRFIPDEIKRQSKL 373
            PLV L ++  EQ + LR       D+++     A+K     E   AN  F++    YR TS +L+ E     +E + E+A  +R +R  L+  C +L+ P +V ++ AE R+   ++  N+     +  G S  E+++ W+V++AA+AAWE            ++   L  A D           L P ++ +Q IL ++  + QR  +   D+  +   G    ++R L   +YG L  +L SI   V SE+YG+    L P  F P + K  ++L
Sbjct:  161 PLV-LNIIGIEQQEELRLKWTDNFDEILLSALSAEKAGRIGEWTQANYAFLSFAFFYRMTSILLKAE-----IEGESEKASTLRNVRGKLLRICDALEEPWQVHIKNAESRVATTIQSDNVSRAAQQNQGRSKDEINAFWVVLYAAIAAWEGAAESRSSPVRKEVVAQLKAAIDVVNKDDAFQTSLQPEIRVLQGILTASTEQEQRSALDFVDEAVLLAWGILANRLRKLALRSYGDLFEKLTSILHAVVSERYGVVSSGLRPVTFDPPDYKGVTEL 431          
BLAST of Gvermi12282.t1 vs. uniprot
Match: A0A7S3EQ74_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQ74_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 4.580e-24
Identity = 85/318 (26.73%), Postives = 152/318 (47.80%), Query Frame = 0
Query:   54 DEDVQRETTSGEQGDETPHRAVTEPSFRKMENPEEDPLDAPIEPLVE------LPVLTKEQIKALRFDPKSRSDDVIEYFADAQKRDDFAEVIVANRDFVTENVLYRFTSAILQVEARAHDLETKEEEARNMRKLRKDLIAHCWSLDFPLKVGVQLAEERLLKVLKGGNIKSDVGRYCGSSTIEVDSLWIVIFAAVAAWEERGRE-NPELANVDMQKSLALAADACKTLKVVNDYLSPSLKAVQDILMSADPEVQRKVVADFDDETIAEIGSFTEKIRLLPTPAYGALVRRLKSIRDYVRSEKYGIEPPTLEPFRFIP 364
            D D+ R+ TS +   +     + + +   ++  E D  + P E          +P ++ E+ + LR         +IE    A++ D F E + ANR  ++ + LY  TS +L+ E+        + +   +RKLR  ++  C  +D P       A+ER+ +V+   ++ S V  + G +++EVD  W+V+ AA+AAWE +G E +P      + + L  A DA   L      L    K +  + + A  E ++ +++D DDE +  I     ++  L   AY  L+ +L  +R++   +KYG + P L+P RF P
Sbjct:   52 DMDLNRKQTSTQMPGKEEMEEIAKKNTETLDKEELDGAEDPFENAERKVRTTVIPEISAERKEELRVGFDKDLFGIIEALKKAEESDQFLETVDANRHLLSTSFLYNLTSILLKYESEM------DNDGDVLRKLRAKVLDACAVMDKPYYRAASDADERVREVVGSTDLGSSVVAHSGKTSLEVDWFWVVLHAAIAAWELQGSEGSPSPYQKKVYEQLTGALDAFLALGRTEKLLGEEFKLMTRVFL-ATAEEKQALLSDLDDEMLVRICLLCCRVERLKFGAYRGLLAKLYDVRNFALRQKYG-KAPGLDPARFTP 361          
BLAST of Gvermi12282.t1 vs. uniprot
Match: A9BKX9_HEMAN (Uncharacterized protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BKX9_HEMAN)

HSP 1 Score: 70.9 bits (172), Expect = 5.050e-10
Identity = 71/280 (25.36%), Postives = 129/280 (46.07%), Query Frame = 0
Query:  109 IKALRFDPKSRSDDVIEYFADA---------QKRDD---FAEVIVANRDFVTENVLYRFTSAILQVEARAHDLETKEEEARNMRKLRKDLIAHCWSLDFPLKVGVQLAEERLLKVLKGGNIKSDVGRYCGSSTIEVDSLWIVIFAAVAAWEERGR-ENPELANVDMQKSLALAADACKTLKVVNDYLSPSLKAVQDILMSADPEVQRKVVADFDDETIAEIGSFTEKIRLLPTPAYGALVRRLKSIRDYVRSEKYGIEPPTLEPFR--FIPDEIKRQSKL 373
            IKAL F P S S   I    D          QK  D   F +  + NR+ ++  +LYR T+  L+ E+   D+E  E ++ N+   RK ++ +   +D P+   + L+E+R+ ++L+    K  + +  G  T  V   WIV+ AA+ AWE++   ENP   +   +K   +      + K  N  L+  L  +Q    + +  V  +     + + I  +     ++  +P+ +YG L+ +   I + +  +K+G +   L+ F+  F    I+  SKL
Sbjct:   45 IKALNF-PNSSSKKFIRLNTDETIQKIIINLQKISDEKTFFDFCITNREHLSYCLLYRLTALKLKAES---DIEN-ENQSDNIANFRKKILENILFIDQPVSQALILSEKRIKEILESSMEKDLILKKIGEDTPNVTCFWIVMQAALLAWEKKDESENPPKKSEIYEKLKKIQTIFYNSPKH-NSLLAHELVYLQKSFKNTNFLVSNE---KNEQDLIEGLKMLISQLEKMPSNSYGPLLEKTLEICNEILEKKFGSKIENLDKFKIMFPLSPIETNSKL 315          
BLAST of Gvermi12282.t1 vs. uniprot
Match: A0A7S0G5C7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5C7_9RHOD)

HSP 1 Score: 65.9 bits (159), Expect = 3.230e-9
Identity = 42/130 (32.31%), Postives = 67/130 (51.54%), Query Frame = 0
Query:  236 WIVIFAAVAAWEERGRE-NPELANVDMQKSLALAADACKTLKVVNDYLSPSLKAVQDILMSADPEVQRKVVADFDDETIAEIGSFTEKIRLLPTPAYGALVRRLKSIRDYVRSEKYGIEPPTLEPFRFIP 364
            W+V+ AA+AAWE +G E NP      + + L  A DA   L      LS  LK +  + + A  E +  +++D DD+ +  I     ++  L   AY  L+ +L  +R++   +KYG + P L+P RF P
Sbjct:    3 WVVLHAAIAAWELQGSEGNPSPYQKKVYEQLTGALDAFLGLGRTEKLLSEELKLITRVFL-ATAEEKPALLSDLDDKLLVRICLLCCRVERLKFGAYRGLLAKLYDVRNFALRQKYG-KAPGLDPARFTP 130          
The following BLAST results are available for this feature:
BLAST of Gvermi12282.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J073_9FLOR3.660e-16671.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QF76_CHOCR5.980e-11953.68Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1XF24_9RHOD1.330e-2427.80Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3EQ74_9RHOD4.580e-2426.73Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A9BKX9_HEMAN5.050e-1025.36Uncharacterized protein n=1 Tax=Hemiselmis anderse... [more]
A0A7S0G5C7_9RHOD3.230e-932.31Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4086959..4088110 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12282.t1Gvermi12282.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4086959..4088110 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12282.t1 ID=Gvermi12282.t1|Name=Gvermi12282.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=384bp
LRGLCVHANARKTPNQKRTSRASKSKRVSAGNTSSTETGGFAAKQPSSTA
KLVDEDVQRETTSGEQGDETPHRAVTEPSFRKMENPEEDPLDAPIEPLVE
LPVLTKEQIKALRFDPKSRSDDVIEYFADAQKRDDFAEVIVANRDFVTEN
VLYRFTSAILQVEARAHDLETKEEEARNMRKLRKDLIAHCWSLDFPLKVG
VQLAEERLLKVLKGGNIKSDVGRYCGSSTIEVDSLWIVIFAAVAAWEERG
RENPELANVDMQKSLALAADACKTLKVVNDYLSPSLKAVQDILMSADPEV
QRKVVADFDDETIAEIGSFTEKIRLLPTPAYGALVRRLKSIRDYVRSEKY
GIEPPTLEPFRFIPDEIKRQSKLTTLSDTKRSV*
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