Gvermi12260.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12260.t1
Unique NameGvermi12260.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length270
Homology
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BLAST of Gvermi12260.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 142 bits (357), Expect = 3.500e-35
Identity = 94/238 (39.50%), Postives = 127/238 (53.36%), Query Frame = 0 
Query:   12 LRKENYKVRHTIELTATRSRVVTSILNTGAGPNLVHPQVLPPSWEDAVQIRKTPK--VTDASRRPMDIKGIITLRVQLGDHQVCTWFPFCSTFGAECLLGTSFIDRYVKAIYPGLQKVSLYRPRPVAIIGSKSGPEASPRRPPLAQNTVSNKVRLSKAILIPPMTQITAKVTCETAGLVKLQNHPRTIDRHMSLMANGIMDCRPMVPFLVQISNFRDCPVRLPKGIIIGIALPVPMAI 247
            L   NYKV  T+ ++AT  R V++IL+TGAGPNL+   +LP  WE   +I   P   +  A  R +  KG ITL VQLG  +V   F       AEC+LG  FIDR V+AI+P  ++V+L     + II     P       P  +   S KVR+SK I++PP ++    V C   GL  LQ   R     +  MANG+ +  P  PF V++ N      RLPKG+++G ALP P AI
Sbjct:   23 LATRNYKVSATVGVSATVLRPVSAILDTGAGPNLIKETILPEDWE-RYRIPGPPAFHIVGAGGRRLLQKGNITLTVQLGTIKVQARFIVVDGLAAECILGCQFIDRQVQAIHPKEKRVTLANGSVIPIIHDSGPPVCGRPSTPPKELPPSTKVRVSKMIVLPPRSECVVPVQCAAPGLRFLQARLRDNATGVH-MANGVAEIWPNQPFTVRVVNTSMKTRRLPKGMVLGHALPHPTAI 258
The following BLAST results are available for this feature:
BLAST of Gvermi12260.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001E1DB02D3.500e-3539.50uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:4012235..4013044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12260.t1Gvermi12260.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 4012235..4013044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12260.t1 ID=Gvermi12260.t1|Name=Gvermi12260.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=270bp
MDAAGDTPVYILRKENYKVRHTIELTATRSRVVTSILNTGAGPNLVHPQV
LPPSWEDAVQIRKTPKVTDASRRPMDIKGIITLRVQLGDHQVCTWFPFCS
TFGAECLLGTSFIDRYVKAIYPGLQKVSLYRPRPVAIIGSKSGPEASPRR
PPLAQNTVSNKVRLSKAILIPPMTQITAKVTCETAGLVKLQNHPRTIDRH
MSLMANGIMDCRPMVPFLVQISNFRDCPVRLPKGIIIGIALPVPMAIMVT
SWDELTRTSDATSKVGRGR*
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