Gvermi12157.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12157.t1
Unique NameGvermi12157.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length67
Homology
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A2V3IYB6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB6_9FLOR)

HSP 1 Score: 75.5 bits (184), Expect = 4.940e-16
Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 LPRVARDTHNCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKCAHNALLRSLKRTR 59
            +P+ A D  NC LRC+S++CY  VY+  PLEEGE+D ARMR F+KCAH   L+ LK+ R
Sbjct:   60 VPQTADDIENCVLRCMSSQCYNLVYSQHPLEEGEVDDARMRTFMKCAHTEELKQLKQRR 118          
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A7S3FNZ8_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FNZ8_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 9.960e-9
Identity = 26/41 (63.41%), Postives = 27/41 (65.85%), Query Frame = 0
Query:   10 NCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKCAHNA 50
            NC L CVS ECYA VYA  PLEEGE+D  R R F  C  NA
Sbjct:  113 NCVLECVSPECYAEVYAQDPLEEGELDTTRGRLFRVCVRNA 153          
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A6S9GZX5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GZX5_HETAK)

HSP 1 Score: 56.6 bits (135), Expect = 4.120e-8
Identity = 21/43 (48.84%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    4 VARDTHNCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKC 46
            +  +  NC  +C+SAECY  VYAH+PLE+GE+D +R + F  C
Sbjct:   64 IVDEAQNCINKCISAECYEEVYAHEPLEDGEVDASRYKRFQAC 106          
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A7S0G6Y2_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6Y2_9RHOD)

HSP 1 Score: 54.3 bits (129), Expect = 6.070e-8
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    6 RDTH--NCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKC 46
            RD H   C L+C S  CY  +YA  PLE+GEID AR +AF+KC
Sbjct:   55 RDEHLQRCILKCASEHCYELIYAKDPLEDGEIDNARSKAFLKC 97          
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A811NEW3_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811NEW3_9POAL)

HSP 1 Score: 55.1 bits (131), Expect = 1.340e-7
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    7 DTHNCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKCAH 48
            +  NC LRC+S ECY  +Y   PLEEGE+DYAR + +  C H
Sbjct:  142 EKENCVLRCLSPECYDLIYGGDPLEEGELDYARGQEYKYCMH 183          
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A090M4E7_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M4E7_OSTTA)

HSP 1 Score: 53.9 bits (128), Expect = 1.540e-7
Identity = 24/42 (57.14%), Postives = 26/42 (61.90%), Query Frame = 0
Query:   10 NCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKCAHNAL 51
            NC LRC SA CY  VY   PLEEGE+D  R RA+  CA   L
Sbjct:   76 NCALRCASAMCYDEVYGSDPLEEGEVDVERGRAYRTCARGEL 117          
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A482RSH6_9ARCH (DUF4787 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSH6_9ARCH)

HSP 1 Score: 53.5 bits (127), Expect = 1.890e-7
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    4 VARDTHNCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKC 46
            V  + +NC  +C S +CY  VY   PLE+GEID AR RAF+ C
Sbjct:   43 VPEEAYNCVNKCTSEKCYNEVYKESPLEDGEIDNARNRAFLSC 85          
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A2K1KAJ2_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KAJ2_PHYPA)

HSP 1 Score: 53.1 bits (126), Expect = 2.620e-7
Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 0
Query:    5 ARDTHNCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKCAHNA 50
            A D  NC ++C+S +CY SVY + PLEEGE+D  R R F  C   +
Sbjct:   71 AIDKENCAMKCLSPDCYQSVYGNDPLEEGELDLKRGREFRFCVRKS 116          
BLAST of Gvermi12157.t1 vs. uniprot
Match: A0A024U4E0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4E0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.770e-7
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:   10 NCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKCAHN 49
            NC   C+SA CYA VYA +PLE+GEID  R   F+ C  N
Sbjct:   54 NCVHECISAACYAEVYASEPLEDGEIDEYRYHKFLSCIRN 93          
BLAST of Gvermi12157.t1 vs. uniprot
Match: T0Q590_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q590_SAPDV)

HSP 1 Score: 50.4 bits (119), Expect = 2.260e-6
Identity = 21/44 (47.73%), Postives = 26/44 (59.09%), Query Frame = 0
Query:   10 NCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKCAHNALLR 53
            NC   C S +CYASVYA +PLE+GE+D  R   F  C     L+
Sbjct:   53 NCVNECTSPDCYASVYASEPLEDGEVDDYRAHRFTSCLRKEFLK 96          
The following BLAST results are available for this feature:
BLAST of Gvermi12157.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3IYB6_9FLOR4.940e-1655.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S3FNZ8_9CHLO9.960e-963.41Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A6S9GZX5_HETAK4.120e-848.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0G6Y2_9RHOD6.070e-855.81Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A811NEW3_9POAL1.340e-752.38Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]
A0A090M4E7_OSTTA1.540e-757.14Unnamed product n=1 Tax=Ostreococcus tauri TaxID=7... [more]
A0A482RSH6_9ARCH1.890e-751.16DUF4787 domain-containing protein n=1 Tax=archaeon... [more]
A0A2K1KAJ2_PHYPA2.620e-747.83Uncharacterized protein n=1 Tax=Physcomitrium pate... [more]
A0A024U4E0_9STRA2.770e-755.00Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T0Q590_SAPDV2.260e-647.73Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031985Protein of unknown function DUF4787PFAMPF16029DUF4787coord: 7..46
e-value: 1.3E-14
score: 54.0
IPR031985Protein of unknown function DUF4787PANTHERPTHR35455UNNAMED PRODUCTcoord: 8..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3624576..3624877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12157.t1Gvermi12157.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3624576..3624877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12157.t1 ID=Gvermi12157.t1|Name=Gvermi12157.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=67bp
LPRVARDTHNCELRCVSAECYASVYAHQPLEEGEIDYARMRAFVKCAHNA
LLRSLKRTRAAAPPSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031985DUF4787