Gvermi787.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gvermi787.t1
Unique Name	Gvermi787.t1
Type	mRNA
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	1483

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_2952	contig	ScGOVlb_2952:255435..259980 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	130081.XP_005704774.1
Preferred name	URA2
PFAMs	CPSase_L_D2,CPSase_L_D3,CPSase_sm_chain,GATase,HhH-GPD,MGS,OGG_N,OTCace,OTCace_N
Max annot lvl	2759\|Eukaryota
KEGG rclass	RC00002,RC00010,RC00043,RC00064,RC00632,RC02750,RC02798,RC02850,RC03314
KEGG ko	ko:K01954,ko:K01955,ko:K03660,ko:K11540,ko:K11541,ko:K19656
KEGG Reaction	R00256,R00575,R01395,R01397,R01993,R10948,R10949
KEGG Pathway	ko00240,ko00250,ko01100,ko03410,map00240,map00250,map01100,map03410
KEGG Module	M00051
GOs	GO:0000050,GO:0000702,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003922,GO:0004070,GO:0004087,GO:0004088,GO:0004151,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006142,GO:0006206,GO:0006207,GO:0006220,GO:0006244,GO:0006259,GO:0006281,GO:0006282,GO:0006284,GO:0006285,GO:0006289,GO:0006304,GO:0006355,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0008534,GO:0008652,GO:0009056,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009166,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009628,GO:0009889,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010605,GO:0016020,GO:0016021,GO:0016053,GO:0016363,GO:0016604,GO:0016607,GO:0016740,GO:0016741,GO:0016743,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016810,GO:0016812,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019104,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019627,GO:0019637,GO:0019692,GO:0019752,GO:0019856,GO:0031224,GO:0031323,GO:0031324,GO:0031326,GO:0031974,GO:0031981,GO:0032356,GO:0032357,GO:0032991,GO:0033554,GO:0033683,GO:0034399,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045007,GO:0045008,GO:0045738,GO:0045934,GO:0045984,GO:0046112,GO:0046386,GO:0046394,GO:0046434,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051252,GO:0051716,GO:0055086,GO:0060255,GO:0062012,GO:0062014,GO:0065007,GO:0070013,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0072529,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901135,GO:1901136,GO:1901291,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607,GO:1903506,GO:2000112,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001141
Evalue	0.0
EggNOG OGs	COG0122@1\|root,COG0458@1\|root,KOG0370@2759\|Eukaryota,KOG2875@2759\|Eukaryota
EC	2.1.3.2,3.5.2.3,4.2.99.18,6.3.5.5
Description	8-oxo-7,8-dihydroguanine DNA N-glycosylase activity
COG category	L
BRITE	ko00000,ko00001,ko00002,ko01000,ko01002,ko03036,ko03400

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi787	Gvermi787	Gracilaria vermiculophylla HapMaleFtJ_2017 male	gene	ScGOVlb_2952 255435..262286 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi787.t1	Gvermi787.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	polypeptide	ScGOVlb_2952 255435..259980 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi787.t1.start1	Gvermi787.t1.start1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	start_codon	ScGOVlb_2952 255435..255437 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi787.t1.CDS1	Gvermi787.t1.CDS1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	CDS	ScGOVlb_2952 255435..259858 +
Gvermi787.t1.CDS2	Gvermi787.t1.CDS2	Gracilaria vermiculophylla HapMaleFtJ_2017 male	CDS	ScGOVlb_2952 259956..259980 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi787.t1.exon1	Gvermi787.t1.exon1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	exon	ScGOVlb_2952 255435..259858 +
Gvermi787.t1.exon2	Gvermi787.t1.exon2	Gracilaria vermiculophylla HapMaleFtJ_2017 male	exon	ScGOVlb_2952 259956..259980 +

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi787.t1.intron1	Gvermi787.t1.intron1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	intron	ScGOVlb_2952 259859..259955 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi787.t1.stop1	Gvermi787.t1.stop1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	stop_codon	ScGOVlb_2952 259978..259980 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at ScGOVlb_2952:255435..259980+
coding sequence from alignment at ScGOVlb_2952:255435..259980+

mRNA sequence

>Gvermi787.t1 ID=Gvermi787.t1|Name=Gvermi787.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1483bp
MRQEAFRVPAALVLAGGQVFPGYSFGYERCIAGEAVFQTGMVGYPEALTD
PSYAAQILVLTYPIIGNYGVPDMSSVDSDSIPLHAESHRIHAAALVVAEY
SSDYSHWNAAGSLSNWLIQQRVPAITGVDTRQLTKIIRRSGTLLARLVVN
PKSAPLPPLSDPNARNLVAEVSVAQARSIPGTGVADAPRILVLDCGVKNN
QLRALRKRARALLVVPWNATLSQFSADYDALFITNGPGDPAMLSVTVDNI
RQCIRDHPNRPIFGICLGHQLLARAAGFGTYKLKYGNRGHNQPCIELSTG
RCHITSQNHGYAVDDRTDKWPAGWFPTFVNANDRTNEGIAHKTLPFFSVQ
FHPEACAGPQDTEYLFDLFIHAAVEAKAGGKNKPLFDAQAAIRRLRESEL
NDGLQRFPLSSAIKKVIVLGSGGLSIGQAGEFDYSGSQAIKALKSQSVRT
VLINPNIATVQTSPGLADKVYYLPVTPENVLKVAENERPDGILVTFGGQT
ALNCGVKLYNSGALEKLGIQVLGTPVEAILDTEDRERFNSRLKEIGEPFA
DSRACETIEQCLKAADEVGYPVILRAAFALGGLGSGFADDAEQLAKLASR
AFTSSSQVLVERSMKGWKEIEYEVVRDAYDNCITVCNMENFDPLGIHTGD
SIVVAPSQTLNDAEYHMLRNAAIRTVRHLGVVGECNIQYALNPQSMQYCI
IEVNARLSRSSALASKATGYPLAFVAAQLALGIPLPMIRNSITKETSACF
EPSLDYLVVKIPRWDLKKFTRVSRALGSSMKSVGEVMAIGRTFEETLQKA
VRMARDNYVFGFESGVVEYSEDMLRNPTDDRLLAIADGLAKGVSVDKIHE
LTKIDKWFLYKLARISACEAQLRNSSNIDDDMLINSKQLGFSDRQVAKLL
DATELAIRKQRLSGDIRPCVKQIDTVAAEFPAKTNYLYVTYSCMSALRSG
QALPSSLYEDSRRPNSTLSTSPASSPGLIQSVPDCFRLQDDVSFNEHGII
VLGCGAYRIGSSVEFDCCAVSAIRTLRSQRARSVMINYNPETVSTDYDEC
DRLYFEELSFERVLDIYDIERSSGIIVSMGGQIANNIAMRLHRQSARILG
TTPEMIDNAENRYKFSRMCDKNGVDQPRWKELSSLADAKAFGADVGYPVL
VRPSYVLSGAAMNVAHKAEDLEAYLTEAATVSNDCPVVISKFILEAKEVE
VDAVANKGELVMHVISEHVENAGVHSGDATLVLPPQDLDEITVRKVEEAT
AKVARALNVTGPMNIQFIAKNNAIKVIECNLRASRTFPFISKTIGLDLAK
LATKVMLGKPVLPYPVDVSKVPFVGVKVAQFSFTRLLGADPILGVEMAST
GEVACFGASREEAYMKGLIATSRHLPSKSVAVSIGTYKEKLEFLASAKRL
KELGYKLIATPGTADFFQEHGVEADVAVWTNKNEYSESEVENTIERMLRD
GRVEFFINIPSNNKYRRLASFESPGLPERSYL*

spliced messenger RNA

>Gvermi787.t1 ID=Gvermi787.t1|Name=Gvermi787.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=4449bp|location=Sequence derived from alignment at ScGOVlb_2952:255435..259980+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGCAGGAGGCGTTCCGCGTGCCAGCCGCGCTGGTGCTCGCTGGCGG
CCAGGTCTTTCCCGGCTATTCGTTCGGCTATGAGCGATGCATCGCCGGCG
AGGCAGTCTTCCAGACCGGAATGGTCGGCTATCCCGAGGCACTCACTGAC
CCCTCGTACGCCGCGCAGATTCTCGTCCTTACCTATCCCATCATCGGCAA
CTATGGTGTCCCTGATATGTCTTCCGTCGATAGCGACTCAATTCCTCTAC
ACGCAGAGTCCCACCGCATTCATGCTGCCGCCCTGGTCGTCGCGGAGTAC
TCAAGCGACTATTCGCATTGGAACGCGGCCGGCAGCCTGTCAAACTGGCT
CATCCAGCAGCGTGTTCCGGCTATCACTGGCGTGGATACCAGGCAGCTGA
CCAAGATTATTCGTCGCTCCGGCACGCTGCTTGCCAGGCTGGTGGTCAAT
CCCAAGTCCGCGCCATTGCCACCACTATCTGACCCGAACGCACGTAACCT
GGTTGCCGAGGTGTCTGTCGCCCAAGCGCGCTCCATTCCAGGCACGGGCG
TCGCAGATGCGCCACGTATTCTTGTACTCGACTGCGGTGTGAAAAACAAT
CAGCTCCGCGCCTTGCGGAAACGGGCACGCGCGCTCCTTGTGGTCCCATG
GAACGCAACTTTATCACAGTTTTCGGCTGACTATGACGCCTTGTTTATCA
CGAATGGACCTGGTGACCCGGCCATGCTATCTGTTACTGTCGACAACATT
CGCCAATGTATCCGAGATCATCCAAACCGCCCTATCTTTGGCATTTGTCT
TGGTCATCAGTTGTTGGCACGAGCCGCTGGTTTCGGTACATACAAGCTCA
AGTATGGGAACAGGGGACACAACCAGCCGTGTATAGAATTATCCACGGGT
CGTTGCCACATCACGTCGCAGAACCATGGCTATGCCGTTGATGATCGTAC
GGATAAGTGGCCCGCTGGCTGGTTTCCAACCTTCGTCAACGCAAACGACC
GTACCAACGAGGGCATTGCTCACAAGACGCTTCCCTTTTTCTCCGTCCAA
TTTCATCCCGAAGCGTGTGCTGGTCCGCAAGATACAGAGTATTTGTTCGA
TCTGTTTATTCATGCTGCTGTAGAGGCAAAGGCTGGAGGTAAGAATAAAC
CGCTGTTTGATGCCCAGGCCGCAATAAGGCGATTGCGAGAAAGTGAGCTC
AATGATGGTCTGCAGCGCTTTCCATTAAGCTCTGCTATCAAAAAGGTGAT
TGTCCTGGGTTCTGGTGGCCTCTCTATCGGTCAAGCGGGCGAGTTCGACT
ATTCAGGGTCGCAGGCCATTAAGGCTCTGAAAAGTCAGTCCGTGCGCACT
GTTTTAATCAACCCCAACATCGCCACAGTTCAGACTTCACCGGGTCTAGC
AGACAAGGTCTACTACCTTCCCGTCACACCTGAAAACGTCCTCAAAGTCG
CTGAGAATGAACGTCCTGATGGCATTTTGGTGACCTTTGGAGGCCAGACC
GCTCTCAATTGTGGTGTGAAGCTTTACAACAGTGGGGCTTTAGAAAAACT
TGGAATCCAAGTGCTTGGAACACCTGTCGAGGCAATCTTGGACACTGAAG
ATCGAGAAAGGTTCAATTCACGGTTGAAAGAGATTGGAGAGCCTTTTGCT
GATTCTCGTGCCTGCGAAACTATTGAACAGTGTCTTAAGGCAGCTGACGA
AGTTGGATACCCCGTTATTCTTCGCGCGGCATTTGCATTGGGCGGATTGG
GCTCCGGCTTTGCAGATGACGCAGAACAGCTCGCTAAATTGGCCTCCCGT
GCCTTTACTTCGAGTTCCCAAGTGCTCGTGGAGAGATCTATGAAAGGCTG
GAAAGAAATCGAGTACGAAGTTGTGAGGGACGCGTACGACAACTGCATTA
CTGTTTGCAACATGGAGAACTTTGATCCTCTTGGTATTCATACCGGAGAC
TCCATTGTTGTAGCCCCATCGCAAACACTGAATGATGCCGAATATCACAT
GTTGCGCAACGCTGCCATTCGCACCGTGAGACATCTCGGTGTCGTCGGCG
AATGCAACATTCAGTATGCTCTGAATCCCCAGAGTATGCAGTACTGTATT
ATTGAGGTCAACGCTCGTCTGAGCCGTTCTTCTGCGCTGGCTTCAAAAGC
TACCGGCTATCCTTTGGCTTTCGTTGCCGCCCAGCTAGCATTAGGAATCC
CCTTGCCCATGATTCGAAACTCGATAACCAAAGAAACTTCTGCGTGTTTT
GAGCCATCATTGGATTATCTCGTTGTCAAGATTCCAAGGTGGGATTTGAA
GAAGTTTACAAGAGTCAGCCGCGCCCTGGGCAGTTCGATGAAGTCTGTCG
GTGAAGTGATGGCTATCGGAAGAACTTTTGAAGAGACTTTGCAAAAAGCT
GTGAGAATGGCTCGAGACAACTACGTATTTGGTTTTGAGTCGGGTGTTGT
GGAGTACTCAGAGGACATGCTCAGAAATCCCACTGATGACCGTCTTTTGG
CCATTGCAGATGGTCTTGCAAAAGGGGTCTCAGTGGACAAAATTCACGAG
CTGACCAAGATTGACAAATGGTTCCTTTACAAGCTAGCCAGAATATCAGC
GTGCGAAGCACAGCTGCGCAACTCGTCAAACATCGATGACGATATGCTTA
TCAACTCAAAGCAACTCGGGTTCAGCGATCGGCAAGTCGCTAAGTTGCTT
GATGCCACAGAACTTGCTATTCGCAAGCAGCGTTTGAGCGGCGATATTCG
TCCATGTGTGAAACAAATTGATACCGTCGCGGCTGAGTTTCCAGCGAAGA
CCAACTATCTTTATGTTACGTACTCTTGTATGTCTGCTCTACGATCGGGA
CAGGCTCTACCTTCTTCACTGTATGAAGATTCTAGAAGACCAAACAGCAC
ACTGTCCACTTCTCCTGCAAGCTCCCCTGGTCTCATACAAAGTGTACCAG
ACTGCTTTAGGCTTCAAGATGACGTTTCTTTCAACGAGCACGGTATTATC
GTTCTGGGATGTGGTGCATACAGAATTGGGTCATCTGTGGAGTTTGATTG
CTGTGCTGTTTCTGCGATCCGAACTTTGAGAAGCCAGAGGGCCAGATCGG
TCATGATCAACTACAATCCTGAGACTGTTAGCACTGATTACGATGAATGC
GACCGTCTATACTTCGAAGAACTTTCTTTTGAACGAGTGCTTGACATTTA
CGACATTGAAAGGAGCTCAGGTATCATTGTTTCAATGGGTGGGCAAATTG
CAAACAACATCGCCATGAGACTTCATCGGCAGTCGGCTAGGATCCTCGGG
ACTACCCCCGAAATGATCGACAATGCTGAGAACAGGTATAAGTTCTCTCG
GATGTGTGACAAGAATGGTGTAGATCAACCGAGATGGAAGGAGTTGTCAT
CATTGGCTGATGCCAAAGCTTTTGGCGCTGATGTTGGATATCCAGTTTTG
GTTCGACCATCATACGTGCTTTCTGGTGCTGCGATGAATGTTGCACACAA
AGCGGAAGATCTTGAAGCATATCTAACGGAGGCTGCTACTGTATCGAACG
ACTGTCCTGTTGTTATATCAAAGTTCATCTTGGAAGCCAAAGAAGTTGAG
GTTGATGCCGTTGCAAATAAGGGTGAGCTGGTGATGCACGTCATATCTGA
ACATGTCGAGAACGCCGGAGTTCATTCCGGTGATGCGACGCTTGTGCTTC
CCCCACAAGATCTAGACGAGATCACAGTTCGCAAAGTGGAAGAAGCTACT
GCAAAAGTCGCTCGTGCCCTGAATGTAACCGGTCCGATGAATATTCAGTT
CATCGCAAAAAACAACGCTATTAAGGTTATCGAATGCAATCTTCGCGCGT
CCCGTACTTTTCCTTTCATCTCAAAGACAATCGGTCTCGACCTAGCAAAA
CTAGCCACAAAGGTTATGTTGGGTAAGCCCGTGCTTCCCTATCCCGTTGA
TGTAAGCAAGGTTCCATTCGTTGGGGTTAAAGTGGCCCAATTTTCATTCA
CCAGATTGCTCGGTGCAGATCCTATCCTTGGTGTTGAAATGGCATCCACG
GGAGAAGTAGCGTGCTTTGGTGCTTCTCGAGAAGAGGCCTACATGAAAGG
CTTAATTGCCACATCTCGCCATCTGCCTTCGAAATCTGTTGCCGTTTCTA
TAGGAACGTACAAAGAAAAGCTAGAGTTTCTGGCTTCGGCAAAAAGATTA
AAAGAACTTGGCTACAAGCTCATTGCAACCCCTGGAACGGCAGACTTCTT
CCAGGAACATGGTGTGGAAGCCGATGTGGCTGTATGGACAAATAAGAACG
AATACTCAGAATCGGAAGTCGAGAACACGATCGAGAGAATGCTTCGCGAT
GGTCGAGTAGAATTCTTCATCAATATTCCTTCTAACAATAAGTATCGGCG
TCTGGCATCTTTCGAGTCTCCCGGTCTTCCGGAAAGGAGCTACCTCTAA

protein sequence of Gvermi787.t1

>Gvermi787.t1 ID=Gvermi787.t1|Name=Gvermi787.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1483bp
MRQEAFRVPAALVLAGGQVFPGYSFGYERCIAGEAVFQTGMVGYPEALTD
PSYAAQILVLTYPIIGNYGVPDMSSVDSDSIPLHAESHRIHAAALVVAEY
SSDYSHWNAAGSLSNWLIQQRVPAITGVDTRQLTKIIRRSGTLLARLVVN
PKSAPLPPLSDPNARNLVAEVSVAQARSIPGTGVADAPRILVLDCGVKNN
QLRALRKRARALLVVPWNATLSQFSADYDALFITNGPGDPAMLSVTVDNI
RQCIRDHPNRPIFGICLGHQLLARAAGFGTYKLKYGNRGHNQPCIELSTG
RCHITSQNHGYAVDDRTDKWPAGWFPTFVNANDRTNEGIAHKTLPFFSVQ
FHPEACAGPQDTEYLFDLFIHAAVEAKAGGKNKPLFDAQAAIRRLRESEL
NDGLQRFPLSSAIKKVIVLGSGGLSIGQAGEFDYSGSQAIKALKSQSVRT
VLINPNIATVQTSPGLADKVYYLPVTPENVLKVAENERPDGILVTFGGQT
ALNCGVKLYNSGALEKLGIQVLGTPVEAILDTEDRERFNSRLKEIGEPFA
DSRACETIEQCLKAADEVGYPVILRAAFALGGLGSGFADDAEQLAKLASR
AFTSSSQVLVERSMKGWKEIEYEVVRDAYDNCITVCNMENFDPLGIHTGD
SIVVAPSQTLNDAEYHMLRNAAIRTVRHLGVVGECNIQYALNPQSMQYCI
IEVNARLSRSSALASKATGYPLAFVAAQLALGIPLPMIRNSITKETSACF
EPSLDYLVVKIPRWDLKKFTRVSRALGSSMKSVGEVMAIGRTFEETLQKA
VRMARDNYVFGFESGVVEYSEDMLRNPTDDRLLAIADGLAKGVSVDKIHE
LTKIDKWFLYKLARISACEAQLRNSSNIDDDMLINSKQLGFSDRQVAKLL
DATELAIRKQRLSGDIRPCVKQIDTVAAEFPAKTNYLYVTYSCMSALRSG
QALPSSLYEDSRRPNSTLSTSPASSPGLIQSVPDCFRLQDDVSFNEHGII
VLGCGAYRIGSSVEFDCCAVSAIRTLRSQRARSVMINYNPETVSTDYDEC
DRLYFEELSFERVLDIYDIERSSGIIVSMGGQIANNIAMRLHRQSARILG
TTPEMIDNAENRYKFSRMCDKNGVDQPRWKELSSLADAKAFGADVGYPVL
VRPSYVLSGAAMNVAHKAEDLEAYLTEAATVSNDCPVVISKFILEAKEVE
VDAVANKGELVMHVISEHVENAGVHSGDATLVLPPQDLDEITVRKVEEAT
AKVARALNVTGPMNIQFIAKNNAIKVIECNLRASRTFPFISKTIGLDLAK
LATKVMLGKPVLPYPVDVSKVPFVGVKVAQFSFTRLLGADPILGVEMAST
GEVACFGASREEAYMKGLIATSRHLPSKSVAVSIGTYKEKLEFLASAKRL
KELGYKLIATPGTADFFQEHGVEADVAVWTNKNEYSESEVENTIERMLRD
GRVEFFINIPSNNKYRRLASFESPGLPERSYL*

mRNA from alignment at ScGOVlb_2952:255435..259980+

Legend: polypeptidestart_codonCDSexonintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gvermi787.t1 ID=Gvermi787.t1|Name=Gvermi787.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=4546bp|location=Sequence derived from alignment at ScGOVlb_2952:255435..259980+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCGGCAGGAGGCGTTCCGCGTGCCAGCCGCGCTGGTGCTCGCTGGCGG
CCAGGTCTTTCCCGGCTATTCGTTCGGCTATGAGCGATGCATCGCCGGCG
AGGCAGTCTTCCAGACCGGAATGGTCGGCTATCCCGAGGCACTCACTGAC
CCCTCGTACGCCGCGCAGATTCTCGTCCTTACCTATCCCATCATCGGCAA
CTATGGTGTCCCTGATATGTCTTCCGTCGATAGCGACTCAATTCCTCTAC
ACGCAGAGTCCCACCGCATTCATGCTGCCGCCCTGGTCGTCGCGGAGTAC
TCAAGCGACTATTCGCATTGGAACGCGGCCGGCAGCCTGTCAAACTGGCT
CATCCAGCAGCGTGTTCCGGCTATCACTGGCGTGGATACCAGGCAGCTGA
CCAAGATTATTCGTCGCTCCGGCACGCTGCTTGCCAGGCTGGTGGTCAAT
CCCAAGTCCGCGCCATTGCCACCACTATCTGACCCGAACGCACGTAACCT
GGTTGCCGAGGTGTCTGTCGCCCAAGCGCGCTCCATTCCAGGCACGGGCG
TCGCAGATGCGCCACGTATTCTTGTACTCGACTGCGGTGTGAAAAACAAT
CAGCTCCGCGCCTTGCGGAAACGGGCACGCGCGCTCCTTGTGGTCCCATG
GAACGCAACTTTATCACAGTTTTCGGCTGACTATGACGCCTTGTTTATCA
CGAATGGACCTGGTGACCCGGCCATGCTATCTGTTACTGTCGACAACATT
CGCCAATGTATCCGAGATCATCCAAACCGCCCTATCTTTGGCATTTGTCT
TGGTCATCAGTTGTTGGCACGAGCCGCTGGTTTCGGTACATACAAGCTCA
AGTATGGGAACAGGGGACACAACCAGCCGTGTATAGAATTATCCACGGGT
CGTTGCCACATCACGTCGCAGAACCATGGCTATGCCGTTGATGATCGTAC
GGATAAGTGGCCCGCTGGCTGGTTTCCAACCTTCGTCAACGCAAACGACC
GTACCAACGAGGGCATTGCTCACAAGACGCTTCCCTTTTTCTCCGTCCAA
TTTCATCCCGAAGCGTGTGCTGGTCCGCAAGATACAGAGTATTTGTTCGA
TCTGTTTATTCATGCTGCTGTAGAGGCAAAGGCTGGAGGTAAGAATAAAC
CGCTGTTTGATGCCCAGGCCGCAATAAGGCGATTGCGAGAAAGTGAGCTC
AATGATGGTCTGCAGCGCTTTCCATTAAGCTCTGCTATCAAAAAGGTGAT
TGTCCTGGGTTCTGGTGGCCTCTCTATCGGTCAAGCGGGCGAGTTCGACT
ATTCAGGGTCGCAGGCCATTAAGGCTCTGAAAAGTCAGTCCGTGCGCACT
GTTTTAATCAACCCCAACATCGCCACAGTTCAGACTTCACCGGGTCTAGC
AGACAAGGTCTACTACCTTCCCGTCACACCTGAAAACGTCCTCAAAGTCG
CTGAGAATGAACGTCCTGATGGCATTTTGGTGACCTTTGGAGGCCAGACC
GCTCTCAATTGTGGTGTGAAGCTTTACAACAGTGGGGCTTTAGAAAAACT
TGGAATCCAAGTGCTTGGAACACCTGTCGAGGCAATCTTGGACACTGAAG
ATCGAGAAAGGTTCAATTCACGGTTGAAAGAGATTGGAGAGCCTTTTGCT
GATTCTCGTGCCTGCGAAACTATTGAACAGTGTCTTAAGGCAGCTGACGA
AGTTGGATACCCCGTTATTCTTCGCGCGGCATTTGCATTGGGCGGATTGG
GCTCCGGCTTTGCAGATGACGCAGAACAGCTCGCTAAATTGGCCTCCCGT
GCCTTTACTTCGAGTTCCCAAGTGCTCGTGGAGAGATCTATGAAAGGCTG
GAAAGAAATCGAGTACGAAGTTGTGAGGGACGCGTACGACAACTGCATTA
CTGTTTGCAACATGGAGAACTTTGATCCTCTTGGTATTCATACCGGAGAC
TCCATTGTTGTAGCCCCATCGCAAACACTGAATGATGCCGAATATCACAT
GTTGCGCAACGCTGCCATTCGCACCGTGAGACATCTCGGTGTCGTCGGCG
AATGCAACATTCAGTATGCTCTGAATCCCCAGAGTATGCAGTACTGTATT
ATTGAGGTCAACGCTCGTCTGAGCCGTTCTTCTGCGCTGGCTTCAAAAGC
TACCGGCTATCCTTTGGCTTTCGTTGCCGCCCAGCTAGCATTAGGAATCC
CCTTGCCCATGATTCGAAACTCGATAACCAAAGAAACTTCTGCGTGTTTT
GAGCCATCATTGGATTATCTCGTTGTCAAGATTCCAAGGTGGGATTTGAA
GAAGTTTACAAGAGTCAGCCGCGCCCTGGGCAGTTCGATGAAGTCTGTCG
GTGAAGTGATGGCTATCGGAAGAACTTTTGAAGAGACTTTGCAAAAAGCT
GTGAGAATGGCTCGAGACAACTACGTATTTGGTTTTGAGTCGGGTGTTGT
GGAGTACTCAGAGGACATGCTCAGAAATCCCACTGATGACCGTCTTTTGG
CCATTGCAGATGGTCTTGCAAAAGGGGTCTCAGTGGACAAAATTCACGAG
CTGACCAAGATTGACAAATGGTTCCTTTACAAGCTAGCCAGAATATCAGC
GTGCGAAGCACAGCTGCGCAACTCGTCAAACATCGATGACGATATGCTTA
TCAACTCAAAGCAACTCGGGTTCAGCGATCGGCAAGTCGCTAAGTTGCTT
GATGCCACAGAACTTGCTATTCGCAAGCAGCGTTTGAGCGGCGATATTCG
TCCATGTGTGAAACAAATTGATACCGTCGCGGCTGAGTTTCCAGCGAAGA
CCAACTATCTTTATGTTACGTACTCTTGTATGTCTGCTCTACGATCGGGA
CAGGCTCTACCTTCTTCACTGTATGAAGATTCTAGAAGACCAAACAGCAC
ACTGTCCACTTCTCCTGCAAGCTCCCCTGGTCTCATACAAAGTGTACCAG
ACTGCTTTAGGCTTCAAGATGACGTTTCTTTCAACGAGCACGGTATTATC
GTTCTGGGATGTGGTGCATACAGAATTGGGTCATCTGTGGAGTTTGATTG
CTGTGCTGTTTCTGCGATCCGAACTTTGAGAAGCCAGAGGGCCAGATCGG
TCATGATCAACTACAATCCTGAGACTGTTAGCACTGATTACGATGAATGC
GACCGTCTATACTTCGAAGAACTTTCTTTTGAACGAGTGCTTGACATTTA
CGACATTGAAAGGAGCTCAGGTATCATTGTTTCAATGGGTGGGCAAATTG
CAAACAACATCGCCATGAGACTTCATCGGCAGTCGGCTAGGATCCTCGGG
ACTACCCCCGAAATGATCGACAATGCTGAGAACAGGTATAAGTTCTCTCG
GATGTGTGACAAGAATGGTGTAGATCAACCGAGATGGAAGGAGTTGTCAT
CATTGGCTGATGCCAAAGCTTTTGGCGCTGATGTTGGATATCCAGTTTTG
GTTCGACCATCATACGTGCTTTCTGGTGCTGCGATGAATGTTGCACACAA
AGCGGAAGATCTTGAAGCATATCTAACGGAGGCTGCTACTGTATCGAACG
ACTGTCCTGTTGTTATATCAAAGTTCATCTTGGAAGCCAAAGAAGTTGAG
GTTGATGCCGTTGCAAATAAGGGTGAGCTGGTGATGCACGTCATATCTGA
ACATGTCGAGAACGCCGGAGTTCATTCCGGTGATGCGACGCTTGTGCTTC
CCCCACAAGATCTAGACGAGATCACAGTTCGCAAAGTGGAAGAAGCTACT
GCAAAAGTCGCTCGTGCCCTGAATGTAACCGGTCCGATGAATATTCAGTT
CATCGCAAAAAACAACGCTATTAAGGTTATCGAATGCAATCTTCGCGCGT
CCCGTACTTTTCCTTTCATCTCAAAGACAATCGGTCTCGACCTAGCAAAA
CTAGCCACAAAGGTTATGTTGGGTAAGCCCGTGCTTCCCTATCCCGTTGA
TGTAAGCAAGGTTCCATTCGTTGGGGTTAAAGTGGCCCAATTTTCATTCA
CCAGATTGCTCGGTGCAGATCCTATCCTTGGTGTTGAAATGGCATCCACG
GGAGAAGTAGCGTGCTTTGGTGCTTCTCGAGAAGAGGCCTACATGAAAGG
CTTAATTGCCACATCTCGCCATCTGCCTTCGAAATCTGTTGCCGTTTCTA
TAGGAACGTACAAAGAAAAGCTAGAGTTTCTGGCTTCGGCAAAAAGATTA
AAAGAACTTGGCTACAAGCTCATTGCAACCCCTGGAACGGCAGACTTCTT
CCAGGAACATGGTGTGGAAGCCGATGTGGCTGTATGGACAAATAAGAACG
AATACTCAGAATCGGAAGTCGAGAACACGATCGAGAGAATGCTTCGCGAT
GGTCGAGTAGAATTCTTCATCAATATTCCTTCTAACAATAAGTATCGGCG
TCTGGCATCTTTCGAGTCTCCCGGGTACAAGTCTCGCCGTGCCGCTGTTG
ACTTCAGTGTACCACTCTTGACAAACATCAAGTGTGCGAAGTTGTTTGTT
AAGGTGTTAAATTTTGTCAAGTCTTCCGGAAAGGAGCTACCTCTAA

Coding sequence (CDS) from alignment at ScGOVlb_2952:255435..259980+

>Gvermi787.t1 ID=Gvermi787.t1|Name=Gvermi787.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=4449bp|location=Sequence derived from alignment at ScGOVlb_2952:255435..259980+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCGGCAGGAGGCGTTCCGCGTGCCAGCCGCGCTGGTGCTCGCTGGCGG
CCAGGTCTTTCCCGGCTATTCGTTCGGCTATGAGCGATGCATCGCCGGCG
AGGCAGTCTTCCAGACCGGAATGGTCGGCTATCCCGAGGCACTCACTGAC
CCCTCGTACGCCGCGCAGATTCTCGTCCTTACCTATCCCATCATCGGCAA
CTATGGTGTCCCTGATATGTCTTCCGTCGATAGCGACTCAATTCCTCTAC
ACGCAGAGTCCCACCGCATTCATGCTGCCGCCCTGGTCGTCGCGGAGTAC
TCAAGCGACTATTCGCATTGGAACGCGGCCGGCAGCCTGTCAAACTGGCT
CATCCAGCAGCGTGTTCCGGCTATCACTGGCGTGGATACCAGGCAGCTGA
CCAAGATTATTCGTCGCTCCGGCACGCTGCTTGCCAGGCTGGTGGTCAAT
CCCAAGTCCGCGCCATTGCCACCACTATCTGACCCGAACGCACGTAACCT
GGTTGCCGAGGTGTCTGTCGCCCAAGCGCGCTCCATTCCAGGCACGGGCG
TCGCAGATGCGCCACGTATTCTTGTACTCGACTGCGGTGTGAAAAACAAT
CAGCTCCGCGCCTTGCGGAAACGGGCACGCGCGCTCCTTGTGGTCCCATG
GAACGCAACTTTATCACAGTTTTCGGCTGACTATGACGCCTTGTTTATCA
CGAATGGACCTGGTGACCCGGCCATGCTATCTGTTACTGTCGACAACATT
CGCCAATGTATCCGAGATCATCCAAACCGCCCTATCTTTGGCATTTGTCT
TGGTCATCAGTTGTTGGCACGAGCCGCTGGTTTCGGTACATACAAGCTCA
AGTATGGGAACAGGGGACACAACCAGCCGTGTATAGAATTATCCACGGGT
CGTTGCCACATCACGTCGCAGAACCATGGCTATGCCGTTGATGATCGTAC
GGATAAGTGGCCCGCTGGCTGGTTTCCAACCTTCGTCAACGCAAACGACC
GTACCAACGAGGGCATTGCTCACAAGACGCTTCCCTTTTTCTCCGTCCAA
TTTCATCCCGAAGCGTGTGCTGGTCCGCAAGATACAGAGTATTTGTTCGA
TCTGTTTATTCATGCTGCTGTAGAGGCAAAGGCTGGAGGTAAGAATAAAC
CGCTGTTTGATGCCCAGGCCGCAATAAGGCGATTGCGAGAAAGTGAGCTC
AATGATGGTCTGCAGCGCTTTCCATTAAGCTCTGCTATCAAAAAGGTGAT
TGTCCTGGGTTCTGGTGGCCTCTCTATCGGTCAAGCGGGCGAGTTCGACT
ATTCAGGGTCGCAGGCCATTAAGGCTCTGAAAAGTCAGTCCGTGCGCACT
GTTTTAATCAACCCCAACATCGCCACAGTTCAGACTTCACCGGGTCTAGC
AGACAAGGTCTACTACCTTCCCGTCACACCTGAAAACGTCCTCAAAGTCG
CTGAGAATGAACGTCCTGATGGCATTTTGGTGACCTTTGGAGGCCAGACC
GCTCTCAATTGTGGTGTGAAGCTTTACAACAGTGGGGCTTTAGAAAAACT
TGGAATCCAAGTGCTTGGAACACCTGTCGAGGCAATCTTGGACACTGAAG
ATCGAGAAAGGTTCAATTCACGGTTGAAAGAGATTGGAGAGCCTTTTGCT
GATTCTCGTGCCTGCGAAACTATTGAACAGTGTCTTAAGGCAGCTGACGA
AGTTGGATACCCCGTTATTCTTCGCGCGGCATTTGCATTGGGCGGATTGG
GCTCCGGCTTTGCAGATGACGCAGAACAGCTCGCTAAATTGGCCTCCCGT
GCCTTTACTTCGAGTTCCCAAGTGCTCGTGGAGAGATCTATGAAAGGCTG
GAAAGAAATCGAGTACGAAGTTGTGAGGGACGCGTACGACAACTGCATTA
CTGTTTGCAACATGGAGAACTTTGATCCTCTTGGTATTCATACCGGAGAC
TCCATTGTTGTAGCCCCATCGCAAACACTGAATGATGCCGAATATCACAT
GTTGCGCAACGCTGCCATTCGCACCGTGAGACATCTCGGTGTCGTCGGCG
AATGCAACATTCAGTATGCTCTGAATCCCCAGAGTATGCAGTACTGTATT
ATTGAGGTCAACGCTCGTCTGAGCCGTTCTTCTGCGCTGGCTTCAAAAGC
TACCGGCTATCCTTTGGCTTTCGTTGCCGCCCAGCTAGCATTAGGAATCC
CCTTGCCCATGATTCGAAACTCGATAACCAAAGAAACTTCTGCGTGTTTT
GAGCCATCATTGGATTATCTCGTTGTCAAGATTCCAAGGTGGGATTTGAA
GAAGTTTACAAGAGTCAGCCGCGCCCTGGGCAGTTCGATGAAGTCTGTCG
GTGAAGTGATGGCTATCGGAAGAACTTTTGAAGAGACTTTGCAAAAAGCT
GTGAGAATGGCTCGAGACAACTACGTATTTGGTTTTGAGTCGGGTGTTGT
GGAGTACTCAGAGGACATGCTCAGAAATCCCACTGATGACCGTCTTTTGG
CCATTGCAGATGGTCTTGCAAAAGGGGTCTCAGTGGACAAAATTCACGAG
CTGACCAAGATTGACAAATGGTTCCTTTACAAGCTAGCCAGAATATCAGC
GTGCGAAGCACAGCTGCGCAACTCGTCAAACATCGATGACGATATGCTTA
TCAACTCAAAGCAACTCGGGTTCAGCGATCGGCAAGTCGCTAAGTTGCTT
GATGCCACAGAACTTGCTATTCGCAAGCAGCGTTTGAGCGGCGATATTCG
TCCATGTGTGAAACAAATTGATACCGTCGCGGCTGAGTTTCCAGCGAAGA
CCAACTATCTTTATGTTACGTACTCTTGTATGTCTGCTCTACGATCGGGA
CAGGCTCTACCTTCTTCACTGTATGAAGATTCTAGAAGACCAAACAGCAC
ACTGTCCACTTCTCCTGCAAGCTCCCCTGGTCTCATACAAAGTGTACCAG
ACTGCTTTAGGCTTCAAGATGACGTTTCTTTCAACGAGCACGGTATTATC
GTTCTGGGATGTGGTGCATACAGAATTGGGTCATCTGTGGAGTTTGATTG
CTGTGCTGTTTCTGCGATCCGAACTTTGAGAAGCCAGAGGGCCAGATCGG
TCATGATCAACTACAATCCTGAGACTGTTAGCACTGATTACGATGAATGC
GACCGTCTATACTTCGAAGAACTTTCTTTTGAACGAGTGCTTGACATTTA
CGACATTGAAAGGAGCTCAGGTATCATTGTTTCAATGGGTGGGCAAATTG
CAAACAACATCGCCATGAGACTTCATCGGCAGTCGGCTAGGATCCTCGGG
ACTACCCCCGAAATGATCGACAATGCTGAGAACAGGTATAAGTTCTCTCG
GATGTGTGACAAGAATGGTGTAGATCAACCGAGATGGAAGGAGTTGTCAT
CATTGGCTGATGCCAAAGCTTTTGGCGCTGATGTTGGATATCCAGTTTTG
GTTCGACCATCATACGTGCTTTCTGGTGCTGCGATGAATGTTGCACACAA
AGCGGAAGATCTTGAAGCATATCTAACGGAGGCTGCTACTGTATCGAACG
ACTGTCCTGTTGTTATATCAAAGTTCATCTTGGAAGCCAAAGAAGTTGAG
GTTGATGCCGTTGCAAATAAGGGTGAGCTGGTGATGCACGTCATATCTGA
ACATGTCGAGAACGCCGGAGTTCATTCCGGTGATGCGACGCTTGTGCTTC
CCCCACAAGATCTAGACGAGATCACAGTTCGCAAAGTGGAAGAAGCTACT
GCAAAAGTCGCTCGTGCCCTGAATGTAACCGGTCCGATGAATATTCAGTT
CATCGCAAAAAACAACGCTATTAAGGTTATCGAATGCAATCTTCGCGCGT
CCCGTACTTTTCCTTTCATCTCAAAGACAATCGGTCTCGACCTAGCAAAA
CTAGCCACAAAGGTTATGTTGGGTAAGCCCGTGCTTCCCTATCCCGTTGA
TGTAAGCAAGGTTCCATTCGTTGGGGTTAAAGTGGCCCAATTTTCATTCA
CCAGATTGCTCGGTGCAGATCCTATCCTTGGTGTTGAAATGGCATCCACG
GGAGAAGTAGCGTGCTTTGGTGCTTCTCGAGAAGAGGCCTACATGAAAGG
CTTAATTGCCACATCTCGCCATCTGCCTTCGAAATCTGTTGCCGTTTCTA
TAGGAACGTACAAAGAAAAGCTAGAGTTTCTGGCTTCGGCAAAAAGATTA
AAAGAACTTGGCTACAAGCTCATTGCAACCCCTGGAACGGCAGACTTCTT
CCAGGAACATGGTGTGGAAGCCGATGTGGCTGTATGGACAAATAAGAACG
AATACTCAGAATCGGAAGTCGAGAACACGATCGAGAGAATGCTTCGCGAT
GGTCGAGTAGAATTCTTCATCAATATTCCTTCTAACAATAAGTATCGGCG
TCTGGCATCTTTCGAGTCTCCCGGTCTTCCGGAAAGGAGCTACCTCTAA