Gvermi7678.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi7678.t1
Unique NameGvermi7678.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length485
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_64contigScGOVlb_64:2088287..2098753 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog112098.XP_008608877.1
Preferred nameGLYK
PFAMsPRK,SRP54
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017,RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303
KEGG koko:K01533,ko:K01760,ko:K15918
KEGG TC3.A.3.5
KEGG ReactionR00086,R00782,R01286,R01514,R02408,R04941
KEGG Pathwayko00260,ko00270,ko00450,ko00561,ko00630,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map00450,map00561,map00630,map01100,map01110,map01130,map01200,map01230
KEGG ModuleM00017,M00532
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004849,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042455,GO:0043094,GO:0043097,GO:0043167,GO:0043168,GO:0043174,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
Evalue8.49e-49
EggNOG OGsCOG4240@1|root,KOG2878@2759|Eukaryota
EC2.7.1.31,3.6.3.4,4.4.1.8
Descriptionuridine kinase activity
COG categoryP
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7678Gvermi7678Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_64 2088287..2098753 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7678.t1Gvermi7678.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_64 2088287..2098753 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7678.t1.stop1Gvermi7678.t1.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_64 2088287..2088289 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7678.t1.CDS1Gvermi7678.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_64 2088287..2088593 -
Gvermi7678.t1.CDS2Gvermi7678.t1.CDS2Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_64 2088642..2088947 -
Gvermi7678.t1.CDS3Gvermi7678.t1.CDS3Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_64 2097782..2098392 -
Gvermi7678.t1.CDS4Gvermi7678.t1.CDS4Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_64 2098523..2098753 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7678.t1.exon1Gvermi7678.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_64 2088287..2088593 -
Gvermi7678.t1.exon2Gvermi7678.t1.exon2Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_64 2088642..2088947 -
Gvermi7678.t1.exon3Gvermi7678.t1.exon3Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_64 2097782..2098392 -
Gvermi7678.t1.exon4Gvermi7678.t1.exon4Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_64 2098523..2098753 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7678.t1.intron1Gvermi7678.t1.intron1Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_64 2088594..2088641 -
Gvermi7678.t1.intron2Gvermi7678.t1.intron2Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_64 2088948..2097781 -
Gvermi7678.t1.intron3Gvermi7678.t1.intron3Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_64 2098393..2098522 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi7678.t1.start1Gvermi7678.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_64 2098751..2098753 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi7678.t1 ID=Gvermi7678.t1|Name=Gvermi7678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=485bp
MVLDKLQGRFPDSVTDLYRSHQADLITSGPVFKSGSLSISNLSVEDGHST
YARQTCLYNWLHTGAVLEIVLGRQGNNSGGKTTMTTLMEMLLRKVGRSVL
IAIVDDFYLTNAEQRQVAATYPDNKLMQYHGTLSTHDLQLLYKMLDTLRR
GQTVSIPNYNKTAFSDRGDRAPKDRWKFISDSTDVVLIEGWCLGFEPVPA
DQLFDPDLALHNEALQQFISTYKRFHGMFIIEIGKMEWVYDWRLQVERDS
RAMGRPGLTDEQVLDSVSRFMPASKQYSQKLRSDAPLKQLRAFALQEAAN
NRLDTIADLSVDGLKLYAQATCVKGIRVAQVRHALRAEMQNIPEAAREDI
ISSAVIEGMDAVSTRQETAADLVDSSKAFSYLAYSTCIMAAGVDVKVGAG
LAGYKESSKRVQIEKRPCECGMLWCVGRCPEYERVVTKRPVYKRHRLTLK
NQVELHRWMVKQAVGLAESLMFTRELWIGDQEHR*
back to top

spliced messenger RNA

>Gvermi7678.t1 ID=Gvermi7678.t1|Name=Gvermi7678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1455bp|location=Sequence derived from alignment at ScGOVlb_64:2088287..2098753- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGCTGGACAAATTGCAGGGGCGCTTCCCAGACTCCGTCACTGATCT
CTACCGCTCTCATCAGGCCGACCTCATTACCTCCGGCCCTGTTTTCAAGT
CCGGCTCCCTCTCTATCTCCAACCTCTCCGTGGAGGACGGCCATTCCACC
TATGCGCGCCAGACCTGTCTGTACAACTGGCTGCACACGGGCGCCGTGCT
GGAGATAGTCCTCGGCCGTCAGGGCAATAACAGCGGCGGCAAAACCACCA
TGACCACTCTCATGGAAATGCTGTTGCGCAAAGTGGGCCGTAGCGTCCTG
ATTGCGATCGTGGACGACTTTTATCTCACCAACGCCGAGCAGAGGCAGGT
TGCCGCCACGTACCCCGACAACAAACTCATGCAGTACCACGGTACGCTGA
GCACCCATGACCTCCAGCTGCTCTACAAAATGTTGGACACTCTTCGACGC
GGCCAGACTGTCAGCATTCCCAATTACAACAAAACCGCCTTCAGTGATCG
TGGTGACCGCGCCCCAAAGGACAGGTGGAAGTTTATTTCGGACTCCACGG
ACGTTGTATTGATAGAGGGTTGGTGCCTCGGCTTTGAGCCCGTCCCCGCC
GACCAGCTTTTCGACCCCGACCTCGCTCTTCACAACGAAGCGCTTCAACA
ATTCATCTCCACGTACAAACGCTTTCACGGAATGTTCATCATCGAGATAG
GCAAAATGGAGTGGGTGTACGACTGGCGCTTGCAGGTAGAGCGTGACAGT
CGCGCGATGGGCCGCCCCGGCTTGACTGACGAGCAGGTCCTTGACTCAGT
CAGCCGCTTCATGCCAGCCTCCAAACAGTACTCCCAAAAACTTCGCTCCG
ATGCGCCTTTGAAACAGCTGCGCGCGTTTGCATTGCAGGAAGCCGCCAAC
AACCGGCTAGACACCATCGCAGACCTGAGCGTCGACGGGCTCAAACTCTA
CGCCCAAGCCACTTGTGTGAAGGGCATACGCGTAGCGCAGGTGCGACACG
CTCTCAGAGCAGAGATGCAAAACATTCCGGAAGCCGCTCGCGAGGACATT
ATCTCCAGTGCCGTTATCGAGGGCATGGATGCTGTTAGTACGCGACAGGA
AACCGCGGCTGATTTGGTCGACAGCAGCAAGGCGTTTAGCTACCTAGCGT
ACTCCACGTGCATCATGGCGGCTGGTGTCGATGTCAAGGTCGGCGCGGGG
CTTGCCGGGTACAAAGAGAGCTCGAAGAGGGTGCAGATCGAAAAGCGGCC
CTGTGAATGTGGTATGCTATGGTGCGTAGGTCGTTGTCCCGAGTACGAAA
GAGTGGTCACCAAGAGACCAGTGTACAAACGCCATCGACTCACGCTCAAG
AACCAAGTGGAACTTCATCGCTGGATGGTCAAACAGGCCGTGGGTCTTGC
CGAATCGCTAATGTTCACGAGAGAACTTTGGATAGGAGATCAAGAACACC
GGTAG
back to top

protein sequence of Gvermi7678.t1

>Gvermi7678.t1 ID=Gvermi7678.t1|Name=Gvermi7678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=485bp
MVLDKLQGRFPDSVTDLYRSHQADLITSGPVFKSGSLSISNLSVEDGHST
YARQTCLYNWLHTGAVLEIVLGRQGNNSGGKTTMTTLMEMLLRKVGRSVL
IAIVDDFYLTNAEQRQVAATYPDNKLMQYHGTLSTHDLQLLYKMLDTLRR
GQTVSIPNYNKTAFSDRGDRAPKDRWKFISDSTDVVLIEGWCLGFEPVPA
DQLFDPDLALHNEALQQFISTYKRFHGMFIIEIGKMEWVYDWRLQVERDS
RAMGRPGLTDEQVLDSVSRFMPASKQYSQKLRSDAPLKQLRAFALQEAAN
NRLDTIADLSVDGLKLYAQATCVKGIRVAQVRHALRAEMQNIPEAAREDI
ISSAVIEGMDAVSTRQETAADLVDSSKAFSYLAYSTCIMAAGVDVKVGAG
LAGYKESSKRVQIEKRPCECGMLWCVGRCPEYERVVTKRPVYKRHRLTLK
NQVELHRWMVKQAVGLAESLMFTRELWIGDQEHR*
back to top

mRNA from alignment at ScGOVlb_64:2088287..2098753-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi7678.t1 ID=Gvermi7678.t1|Name=Gvermi7678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=10467bp|location=Sequence derived from alignment at ScGOVlb_64:2088287..2098753- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGGTGCTGGACAAATTGCAGGGGCGCTTCCCAGACTCCGTCACTGATCT CTACCGCTCTCATCAGGCCGACCTCATTACCTCCGGCCCTGTTTTCAAGT CCGGCTCCCTCTCTATCTCCAACCTCTCCGTGGAGGACGGCCATTCCACC TATGCGCGCCAGACCTGTCTGTACAACTGGCTGCACACGGGCGCCGTGCT GGAGATAGTCCTCGGCCGTCAGGGCAATAACGTGCGCGTGTACTAGTACT ACCTAACGGTCTACTTCTGGATCCTGCGCCAGCTGGACCGCCACAACGAT TTGATCGCTGCGTCGGGCGCCCGCCCGCACCCCTTTCATCTTGGGCTTCT CGTGCCCGCAGAGCGGCGGCAAAACCACCATGACCACTCTCATGGAAATG CTGTTGCGCAAAGTGGGCCGTAGCGTCCTGATTGCGATCGTGGACGACTT TTATCTCACCAACGCCGAGCAGAGGCAGGTTGCCGCCACGTACCCCGACA ACAAACTCATGCAGTACCACGGTACGCTGAGCACCCATGACCTCCAGCTG CTCTACAAAATGTTGGACACTCTTCGACGCGGCCAGACTGTCAGCATTCC CAATTACAACAAAACCGCCTTCAGTGATCGTGGTGACCGCGCCCCAAAGG ACAGGTGGAAGTTTATTTCGGACTCCACGGACGTTGTATTGATAGAGGGT TGGTGCCTCGGCTTTGAGCCCGTCCCCGCCGACCAGCTTTTCGACCCCGA CCTCGCTCTTCACAACGAAGCGCTTCAACAATTCATCTCCACGTACAAAC GCTTTCACGGAATGTTCATCATCGAGATAGGCAAAATGGAGTGGGTGTAC GACTGGCGCTTGCAGGTAGAGCGTGACAGTCGCGCGATGGGCCGCCCCGG CTTGACTGACGAGCAGGTCCTTGACTCAGTCAGCCGCTTCATGCCAGCCT CCAAACAGTACTCCCAAAAACTGTACATCCGAAGCGAGCCGTTGTTTCCC TACCATGAGTCTAAATTATATGTCATTGAATGCACGCGTACATGTAGGTT GACACGCATTTGCCACGGGGCTAGACACGCAATGTAAGAAATCGAATCCA GTCGCCGCAACACAAGTAATGCAGTTAAAGCGCCGTGTTTTAGCGCACCC TTTTTTGAGTGATAATGACCAAATCGTGTACCTCTCCGGACTCATAGATG GAGAGTCGATGGTTACGTGGCAGGGGAGGCAGATCAGCAGATACGGGTAC TTAAGTGCGTTTTTTTGCTATTTTATCAGGGAGTCTGGGCAACGGAGATG AAATTAGAAGAAGACCAGTAAAAGCTAATCAGGTTTCCCTCTTGTGCTTT ACCGTCGTTATACGCTCTGCGTTTTAATAGTTATGGGCCGAGAAAGCTCA AGCCTACCGTCAAGGCCACGTTTCTCGTGGGACATTCGAACAGTACCGTA AACCAATGGACGTGGAAATCAGGAGCAGTATGCAGAAGCAGTCTCACGCT GGCAAGCGTTTCAGGACACTCTTACGGATTCTAACAGTAACAATATTGCC AAGGAGGCACGTGGAATCACGTTGCAGTCGCAGTTATAAGAACGGGCAAG AGGTTTGTGCAAGGCGATACCCGAAAGTGTAAAACGTTTTGGGGAAGGAG TAGAAGCAATCGTAGACGCTCTTTATAAGCGAGATGCACTAGCTGTGGTG TCAAATGTTTTCCACGACTTCATGACGTTGATGAACACCAAACGCAACCA TCACGAAAGCTTCAAGAAATTTGAATCGAGATTTCAGGCACAGGTATCAA GATTGAATGCCCATGGATCCGAAGCCAAACTTTCCGATTCACTCGTAGCC TTTGCTCTACTGGCATATGCGGATGTTGAAAACAACAAAAGGGTCTCAGT TCTGGCAAACGGTGCACCGAGAAGCTCAAGTTTGACGCCTTCGTCCTCAA CCAGGGATTATTTAAAGGCTGTGTCGTACGAAGCTATCGTCTCTGTGCTT CGTCAGTGTGACAAAATGAAAGGAGTAAATACAGACCATCCGTCGAGGCT TTTGTCGAGCAACGCAGCACATTATGACCCGCATCGAGGATCGTCCGCAG AAAAGTCGAATGGGCACAAGGGCAGAGAAAAGTCGCGAAGAACACCGAAG CAGATTGAAAATCTCAAGGCGAGAACAAGATGTCGCAAATGCCATAAGTT TGGACACTTGAATGGCTATCACAATGTAGACGGGTCGCTGAAGCCCGGAG CGAAGTCAACGGACACGGCAGTATACCCAGACCGATCTGACGGAAGCGTA GTCAGATTCAACATGGCAAGGCTGAGCACACCCAACAAAACTGTGGCTTC GATGCAGGGAAACGTCGGTTCGTTCCTAGGCAACGGAGCACCGTACAGCG GAATATGTTTGGCAGAACTAAAGCTCGTCTCAAGCTCAGTCAACTCCGAG TAGAACAAACATCTGGAGCCCCTACAGAACTCTATTGCAGACCAACACTT TTGGCAGTACGGAAGCGGGCAGCACCGTAGCGTAGCCAAGAAAATACTGG GAGCTGTAATGCTCAAGGCCAAAACAGACGACGAATCGATCGTGGAGATA CGGCATTTAGTCATGGAAGGGTCCTCTCAGTGCGTTTTGGGGCGCAATGC AACGAGAAAATGCGACATCATGCATGCCAACCAGAACAAATTGATTTTTC TACCCGATGGAAACGGTACGTCTAGAGGAACTATCACGTTGGTTGACAGA GACATTCACACGTACAAACCGAACTTGGTGTTTACCTTTCAGGCAGGCAG ACGTACGGAGCATGATGAAATCACTCATTTTTTCCCCTCCACACAAAATG AAGGGGATGTAAGCAGGAAGCCGTGATCTGAACTCAGGAAAATAGTCAAC AAGGTCTACGAGCACGTATGCGGACACTCAACGTATCTCGACATCAAGAT TTTGCTACAAAAGAACACGTTGTATAACTCGCAAGGAGACCGATACCTAT GTTTGACTCTGGAAAAGTATACAGCCCGCAGCACAAAGGCGAAGCCCAAG ACCATTAGGAAAGTGTCCCTCAGCGCAATGAAATAAGGTTTAAACGACTT GGTATGCGATGAACACATGTTCCTCAACCAGTACTGTGTACTGCATGTAA TGGATGCCACCTCTCGCTATTTAATGAGTGCTACAGTCGACAACACAGCG ATGAAAAACGCTATGCCAGTATTCGATGCTCATTAGATCACGCCGTTCTA GGCCCTAAAGACGGTGACCTACGACCAAGCCTTCAAGAACAGCATATTCT TGAAGTATCTTGCAAAGCAGGACATAGAAACCCGACCGCTGCCCTTCGCA GACATAAGAAGAACGTTTTGGAATCCAAACACAGAATAATACGTGATGTA ATCCACCGTCTTCGGGAAGCCAGAAGCGACCAGGAAAAGTGTTAGACAAA TGCACTACTGGTTCAGCAAGATATACGGATATCGAACAATCTATACGGAA ACGAAGTTTTATTAGCTCAAGAATTAACAAAAGGTTATGCCAGACTGGTA GAAGCTGGAGCTATGCCGAAGGTACTGCCAAAAGACCTTGTGGACGCCTA TCAAACCCTTTTAGCCAAGCGTAAACTAACGCTCATACTACGTTTGAGGA CCATCTAAGAGGCACCCATCGCGGTAGGAGACATCGTAAAATTCTTTGTG AAAAGCGACCATGAGAAGAGAGGAAAATGGTCCGATAACCGAACGGTTTT GGCTAACGATTTCAAAAACCGCACCTTCACAATTCCCGGGTCCAGGGGAA GAACTATATCCACCGCCATTGAAGATGTAAGGCCAGCCATACGAGATGAA AAGCTAGCAGCCATTTTGCAAGAAGCTATAGACGAGATGGATAGACATCT AGAAGAGGCTGTAGACCGTCTGGACAAGGACACTATATTGCAGAAAGTAG AGCAAACCATTGAATCACAGAATCGTGTAAGCAGAGAAATTGAACTGGAC AGCATCGGACCCAACGTACCAAGAATTGCAAACAAGATCGAAGTATATTG GCCAATTGACAAACAGTTTTACGAAGAATCAGTCCAGAACCATAACGAAG GCTCAGGCAAGTATTCAATTCTGTACGAAGACGGTGAAAATGAAAATGTG GATCTGCAAGGAGAGGTATGGAACTACGTGAAGTATACAGACTTCAACGA CCAGCAACCAACCTCCGACTCGACCGCAAATAACGACAAAAATCTCGTGG CACGGGAAATGCAGTTATCACCCGGACAAAAATTGCAGAGCGAAGAAAAG AAACTCGTCGATATTTACTACAAGGCTTTTGGGAATGAAGAGTTCATGTT GCAGCATACATAAGGCTTGCCACCGTATGCCACCCAGAAGGCGTACAAAG GGGAGAAAAATCGTTCAAGAAGACGGTGGGGGACGTAGCCGTAGCCGACG TACCGAAGAATGCCAATATCCCCACTAGTCACGTGTTGTACAAGGTCAAA ACATGAGATGATAACTCCCATATGCTGAAAGCCCGAATAACCGTGCACGG AAACAAGGATAGACACAGGGAGCTTTTAAGGACAGACTCAGCTACGGTAA ATCCCGTCGGAATACGTATAAGGCTTTCTTCAGCAACCGTATATCGTTGG AAACTCGCCAAGATCGATTTAAAGTCCGCCTTCCTGCAGACTCAAGCCGA GCGAGACTTTTATTTGGCTCCGCCGCGTGAATGCAAGACAAGACGCCGGC ACTATTGGTTTCCTTTGTCAGTGGAATATGGACTAGCTAATTCTGGTACA AAGTGGCAGGAGTTTAGTGACGATATTTTTTGCGGTTTCGGCTTTCAACA ATTAGAGTATGTACCGCAACTGTTTTACAAGACGGCAGAAGGAAAACTTA AAGTGGCTGCAGTGGGAGGCGTAGACGATATACTGTTTGGTGGAAAACGG GAGGTTTTAACGGCAGTCCTGGAGAAGATAAAACATGCTCACAAGCTTGG GACTATTGCGTATAGGGCGGGATAAATCCATTTCAACGGACTAATAGTCA CACAAAACGAAAACATGACAGTCTCCATCCACGTAGACGAAAAGATGTAG CGATATCAGCCTCCTACATTAACACGTACACGGAGGAAGTAACAAGACTC GCCTCTCAACAGAATTGAGCTTGCGTCGTTCAGGTCTCTTAACAGCTGCT TAAGGATGGTGGGGAATCGCAGCGTCCCTGTTTTCCTCTTTTGCAGCCAG CAATCTCCAACAAAAAGGTCCAACCGCTACAGTGAAAGACATGGTTACGC AGATGAACATGCTTAAGAACCTGAAGAAAATGGCAACATAACCTAAGTTC ATCAGACCGACTGTTAAAGGAGACTATCGAGCAACGATCATCTTTTTCTC TGATGCTTGCAGAAAGGAAGAATAAGAACAACTAGGGTTTGTTGCAGGGC TGCTCTTTGAAAAACACCAAAAGGATTCTGTCATACGTTTGATCGCTTGG AGCTCACACAAGTCTCGCAGACCTGTGAAGTTGATTGGTGCTGCAGAAAC ATTGGCTGCTGTAGAACCAATTGACGAAGGAAAGGTTTTGGCAAACGCAT TTTCAACCCTGCTTGGAGTAGGTGTTCGTTTGTGGATCGTGGTGGACTCT AAATACCTATGCAGTGTACTTTCAACGTGCAGACTCGCTGCTGATCGGTC TCTTCGCGGGGATGTCTCAGTCATTACATACGAGTTCGAAACGCACAACG TTGAGCTGATGAAATGGACTCCAGGCGAGATCAACTACGCAGACCGAATG ACCAAGACGGATAGATTCATGTCGGCCAGCTTAGAACTGATGTTATACGG AGGAATGGTCTCCATGGGCTTTGGTGAGGCGCTTTCCAGCTGCTCAGAAA AGTCAACAGGATAATAAGATCTCAAAAGGTTATGAGTGTGAAATTCATAT CATTGAATGCACGCGTACATGTAGGTTGACACGCAATTGCCATGGGCTAG ACACGCAATGTAAGAAATGGAATCATAATGAGCTACATATTGAAATCGAC CAACGGCGGAGACCTGTACATCGCATCAGTCACTTCTGAGACCTGTTCAC CCTGTAGGGTATGTTGACTTAGCAGGCCATTGTGTGCCGAGGCTGTCTGC GTAGGGCTTCCGTGACATACCAAAAAGAAATCGATAAGACCAATATCTCG CGCACGTTGCGCCTTTTTTTGCACCAGCACTGTGAGGCGCTCACGAGCGG GGAGATCCGCGTCTGAGAGATCTGGCCCATACTGTGCTGAAAACAACATG TTGACTCGTTCGGGCAGAGACATTGTAAGCGTCAATATGTATCAGTTGTT TTATGTACCGGTAACATAATAGTTACATCGAAAAGCCATGTCCTGTGTGA TGAGAGCGGCGTTGACTGGGCACGCCACCGACTGGTGATTATTCTTTTCT AAATCTAGCTTGATCACAACTTGGATAACTCTCCTTTACTAGAACCTGAG CGCAACTTGGGGCTTAAGTAGACGTCTGGAATCTTACTCTTCGCCTGAAG CACATATACAATTCAAAGAACTGTAAACCTACCTAACGTAAGTAAAGATA TTATTATGTAACGAACAATTCATTCTGGTTAGAACGCATGTAAACTGTCA TCAATATCACGTATAGGGATTCAGTCAGGTTACGTCAACACACCCTCTCG TTCTAAGCCATAGAATCAATTGACAGTCCCAAGCTCTTGCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAACTGT AAACCTACCTAACGTAAGTAAAGATATTATTATGTAACGAACAATTCATT CTGGTTAGAACGCATGTAAACTGTCATCAATATCACGTATAGGGATTCAG TCAGGTTACGTCAACACTAAACTTTGCTTGCACTCACGTCCTGCACATGG TTGTCTGCGTCTTGCGATTGTGCACCACGCAGTGTTACAACTCGCATGAA AGGCACACGAGGCCGTGCGCCTCTAACAAACGCCACAAGTCGTCCTTGCG GAAAAAGTAGGCGTACGTTCCGTCTCTGCGCAGGTACAGGTGCTCGGGGA GCTCGTGCGCTCGCTGCGCGCGCTGGGCGAAGCGCTTCTCCCTCATGTCA CCCACGGCGTAGTCTCGCACGAACAGCTGGCCGCCGCCGGCGAGCAGCGC GGCCAGCCCGCCCGCGGCTGCGCGGTGCTGCGCGGGCGGTTGCGCGGTGC TGTGCAGGCGTCTGCGCGGACAGCGTCCACATGGTGGTGATGAAGTCCAC TCCGTGCGGGCGCACGGCGCGCACGACGGGCACGTAGCTGTCGGGAAGCG TCACGTCGGTCTGAAACGCGCGCACCCTGACCTCGCGGTGCTCTGCTCTG GCGCGCAACAGGCGCACGACGGCGGCGCTGAAGTCGAACTCCAGCGCGAA CAGGCGGCCGTTGGCGCGCAGCAGCGGGAAGACGGCGTTGCCCGCGCCGC AGCCCGCCTCGACAAGCACGCGGTCGCAGGTGGCGCTGGGCGCGCAGCCG GCCGCTAGTCGCGGCGGCGCGCGCGCCAGCGGCGGTACGTGCGCCGCCGG GTCGGCCGCCGCGCCCGCCGCCATCAGCTACGGGGAGGCCGCGCGCAGCA CGTGCCGGTCCTTCAACAGCGTCGGCTTGGTCGCATAGAAGAGGTCCCAG CGTTGCGCGGCTTGCGCCGGCGTCGCGGGCGGGCGGCACAACTCGGCGGC GAGCTCGCGGTTGACCGCATGGCGAGCTCGCGTCTGCTGCGCGCGGGCGC GCTTGCGCGTGCCGCGTTGCTCGCCGTAGCCTAGCGACGGCGGAGGTGGT GCCGGTGGCGGTGGGGAAAGATCCTCAGAGGCGTCGCTCGGAGACATTCT TCGCTCCCGGCGACGACGACGACGACGGCGGCGGCGGCAGCCCCACCGGA GATGATGGCGATGACCAGCTGCGCGTAGAGCGCGAAGCGTCGTGCGAAGA GATGACGTGGACTACCTGTCATGCGTGGCGCCACCTCAGCTTGCTGTCTA GTCGTGAGATCAGAGGCAGTTTCCGATACCCGCACCGCGCCGCGACGGTC GCACGGAAGCCCCCTTGCTCATCACCAACGCTCAAACCATCGCTCACATC CCCTTGAAGATGAACACCCCCTCACTGCGGCCCTCGTCCAATCTCCTGGC AGGCGCTGCATTGCGACTACCACATCGGTGGAGACGTTGTGAACTTCACC TCAACAAACCAGCCGTTGTCGATTATTGCTCTTACTCGGCGGATAGGCGA GAGCGATGGACCCATCCACCCCTCACAAAAACAATTCTGTGTTTCTGACA TCTGCCGTTGGGTGACGACAAGCCCCACACCAGACATCGGGCTTTTCATG GTTCGTGGTCCACATGGCGAACGTCTCCTAAGGTGCCAGAATGCAATGCG CTTTTGGCGCATAACTCACGGGAAATGATCTTGAGCTGACCGTTGATAGT AGTGCCATGCCACACTTTCTACATGCTCGCAACCCTCTTGAAATGTGCCC GTGTCCGCGGGCGTCTCCTGGGGGGGTGCTGGCCGCCGTGGTGTCGCACG CTTCCAAGCGCGTTCATTGTAATGACATCCTCGGCCTGCCTCCGCGACCA ACACAGTCAAAGGCCACAAAACGGTCGCGTTAGTCGCCAGAACATCACCT CGCATTCATTGGCGCCGTCTGCAAAGTCTCACGCTAGCTTCCTCAATCTC GAGTGAATCATGTAATCTTGTGGTCCACAACGGTACCATGCCAAACGCAA ATAACAACCCATGTCAGCTCATCGACACCCCCCTTCACTCTGGATTCTCG GGGTTTCGTCCATCTGGTCGAAGTTCCCAACTCTTGACATCTGGATACTT GACGCGAGTCAACTCTTATCATCTGACTGCTCATTCAGCTTGACAGACGT AGTCCCCACCATGGAAGCCGTGGCATCGTGGCGGCAGAGGCAGGGTGATG CAGAAGAGTCTACAAAAGCGTCGCTTCGGGGTATTCTTTGGGGGGGGGGG AAGTAGCAACGGCAGCAGCGATGAGATCTACTCAAGTATGAGGACAACAG GCTACGTGTAATAGAGCAGTGAGGCGCTACGCACTTGCTCACGAGACAGG CGACGTGGACCGCGTGCGTCGCGTGGCGCAGCGTCAGAGCGCTGCAGCTG TATGTTACACCTGTGACTTGGCAGCATCGGCGCAACAGCTGAGCGCATTT CGAGAAGAGCCACCGCATTGTCATATTTTACACGCCCCATCGTCGCTGGC ACCTCTATCTCCACCTCACTCGCGGTGCCCCGTCCCCGCCGCTGCTCTCC CTAATGCGCCCGGCCTGTGCCTCCAACCCCCCTCGCACGCGCCTTTGGCG TTCCATTTCGCTGAATAGCGACCACGCAAGCCTTTGCTCAATGGATTCGC CGCGATTACACCTCCAGCCGACGGTCATGTACCACCCACTGCCACACGCC ACCAGCTACTCGCCCTCCGCATCTGCCGCTCCGTCTTCCATCCCCCCGGC CGCGCCCGAGCTTTCGCCTAATCGCGACGCTCGCGCCGGCCCCGCCGGAA TATCCACATTTCGACTCCTCATCACACTGATCATGGTGGTGATGCTCGCG CCGGCCCCGCCGGAATATCCACATTTCGTCTCCTCATCACTCTGATCATG GTGGCGATGCTCGCGCTTCCCGTCTGTTTCTACCTGCTATACCGTCTACA GAAGAGTCGCTCCGATGCGCCTTTGAAACAGCTGCGCGCGTTTGCATTGC AGGAAGCCGCCAACAACCGGCTAGACACCATCGCAGACCTGAGCGTCGAC GGGCTCAAACTCTACGCCCAAGCCACTTGTGTGAAGGGCATACGCGTAGC GCAGGTGCGACACGCTCTCAGAGCAGAGATGCAAAACATTCCGGAAGCCG CTCGCGAGGACATTATCTCCAGTGCCGTTATCGAGGGCATGGATGCTGTT AGTACGCGACAGGAAACCGCGGCTGATTTGGTCGACAGCAGCAAGGCGTT TAGCTACCTAGCGTAATGGAACACAAAGTACAACGGCGACCACGTCCTGT TGTCCGATAGGTACTCCACGTGCATCATGGCGGCTGGTGTCGATGTCAAG GTCGGCGCGGGGCTTGCCGGGTACAAAGAGAGCTCGAAGAGGGTGCAGAT CGAAAAGCGGCCCTGTGAATGTGGTATGCTATGGTGCGTAGGTCGTTGTC CCGAGTACGAAAGAGTGGTCACCAAGAGACCAGTGTACAAACGCCATCGA CTCACGCTCAAGAACCAAGTGGAACTTCATCGCTGGATGGTCAAACAGGC CGTGGGTCTTGCCGAATCGCTAATGTTCACGAGAGAACTTTGGATAGGAG ATCAAGAACACCGGTAG
back to top

Coding sequence (CDS) from alignment at ScGOVlb_64:2088287..2098753-

>Gvermi7678.t1 ID=Gvermi7678.t1|Name=Gvermi7678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=1455bp|location=Sequence derived from alignment at ScGOVlb_64:2088287..2098753- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGGTGCTGGACAAATTGCAGGGGCGCTTCCCAGACTCCGTCACTGATCT
CTACCGCTCTCATCAGGCCGACCTCATTACCTCCGGCCCTGTTTTCAAGT
CCGGCTCCCTCTCTATCTCCAACCTCTCCGTGGAGGACGGCCATTCCACC
TATGCGCGCCAGACCTGTCTGTACAACTGGCTGCACACGGGCGCCGTGCT
GGAGATAGTCCTCGGCCGTCAGGGCAATAACAGCGGCGGCAAAACCACCA
TGACCACTCTCATGGAAATGCTGTTGCGCAAAGTGGGCCGTAGCGTCCTG
ATTGCGATCGTGGACGACTTTTATCTCACCAACGCCGAGCAGAGGCAGGT
TGCCGCCACGTACCCCGACAACAAACTCATGCAGTACCACGGTACGCTGA
GCACCCATGACCTCCAGCTGCTCTACAAAATGTTGGACACTCTTCGACGC
GGCCAGACTGTCAGCATTCCCAATTACAACAAAACCGCCTTCAGTGATCG
TGGTGACCGCGCCCCAAAGGACAGGTGGAAGTTTATTTCGGACTCCACGG
ACGTTGTATTGATAGAGGGTTGGTGCCTCGGCTTTGAGCCCGTCCCCGCC
GACCAGCTTTTCGACCCCGACCTCGCTCTTCACAACGAAGCGCTTCAACA
ATTCATCTCCACGTACAAACGCTTTCACGGAATGTTCATCATCGAGATAG
GCAAAATGGAGTGGGTGTACGACTGGCGCTTGCAGGTAGAGCGTGACAGT
CGCGCGATGGGCCGCCCCGGCTTGACTGACGAGCAGGTCCTTGACTCAGT
CAGCCGCTTCATGCCAGCCTCCAAACAGTACTCCCAAAAACTTCGCTCCG
ATGCGCCTTTGAAACAGCTGCGCGCGTTTGCATTGCAGGAAGCCGCCAAC
AACCGGCTAGACACCATCGCAGACCTGAGCGTCGACGGGCTCAAACTCTA
CGCCCAAGCCACTTGTGTGAAGGGCATACGCGTAGCGCAGGTGCGACACG
CTCTCAGAGCAGAGATGCAAAACATTCCGGAAGCCGCTCGCGAGGACATT
ATCTCCAGTGCCGTTATCGAGGGCATGGATGCTGTTAGTACGCGACAGGA
AACCGCGGCTGATTTGGTCGACAGCAGCAAGGCGTTTAGCTACCTAGCGT
ACTCCACGTGCATCATGGCGGCTGGTGTCGATGTCAAGGTCGGCGCGGGG
CTTGCCGGGTACAAAGAGAGCTCGAAGAGGGTGCAGATCGAAAAGCGGCC
CTGTGAATGTGGTATGCTATGGTGCGTAGGTCGTTGTCCCGAGTACGAAA
GAGTGGTCACCAAGAGACCAGTGTACAAACGCCATCGACTCACGCTCAAG
AACCAAGTGGAACTTCATCGCTGGATGGTCAAACAGGCCGTGGGTCTTGC
CGAATCGCTAATGTTCACGAGAGAACTTTGGATAGGAGATCAAGAACACC
GGTAG
back to top