Gvermi6963.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi6963.t1
Unique NameGvermi6963.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1528
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:757739..762464 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog88036.EFJ08240
Preferred nameCIPK23
PFAMsNAF,Pkinase
Max annot lvl35493|Streptophyta
KEGG koko:K07198
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006950,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009414,GO:0009415,GO:0009536,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0010107,GO:0010118,GO:0015672,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0030001,GO:0031667,GO:0034220,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0065007,GO:0071704,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0140096,GO:1901564,GO:1901700
Evalue9.16e-84
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota,37R37@33090|Viridiplantae,3G903@35493|Streptophyta
EC2.7.11.11
DescriptionNon-specific serine threonine protein kinase
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6963Gvermi6963Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_24229 757739..762464 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6963.t1Gvermi6963.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_24229 757739..762464 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6963.t1.stop1Gvermi6963.t1.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_24229 757739..757741 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6963.t1.CDS1Gvermi6963.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_24229 757739..762260 -
Gvermi6963.t1.CDS2Gvermi6963.t1.CDS2Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_24229 762403..762464 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6963.t1.exon1Gvermi6963.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_24229 757739..762260 -
Gvermi6963.t1.exon2Gvermi6963.t1.exon2Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_24229 762403..762464 -


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6963.t1.intron1Gvermi6963.t1.intron1Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_24229 762261..762402 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6963.t1.start1Gvermi6963.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_24229 762462..762464 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi6963.t1 ID=Gvermi6963.t1|Name=Gvermi6963.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1528bp
MASRVGKYLLFETLGEGAFGKVKLGVHEETGEQVAVKIMDKSDIKAQEMT
MNVRREIAIMKALKHRNIVNLRQVLTSHTKLYIVMDLVTGGELFTKILKE
GKLPERVARRYFQQLVDGIEYCHRRGVCHRDLKPENLLIDETTGELKITD
FGLSAMKGASTTEELLHTQCGSPNYCAPEIIAHHKQGYNGAKVDAWSCGI
ILFALLAGFLPFYDENTKVLYRMIQKEDVKFPRKFPEDARDLILCLLHKD
PDRRYTLADVKRHRWFAIDYHGDDALSRSGASPPVSRRRRRGHSRSRSTD
QGPRSFEPRKKSDKSDAGSASGSTSDATSNPVDTTATPSLPMDSGQHGSS
SSQRPPLVPAVRAPHRPQQTIPPLPPRVPPPPPYSAVKAPCSPIREKAPA
PPAIIPAVHVSHHVTPSARPVGRYNDAIRRHPVQEHQLRQSPVPHPHPTF
VHGTVTPSVSAPGGSPESGNASVEDNTAPVTDPTGTYPVPSPPSNLQPAA
APPPPPFPAPYDASSSPNMTGNTSPTSALIGKISLNNTKSPLTEAVQSGS
ESVSGSIRPVSSPPLSSTSSENVAKQPNVSKVTHPVPQNVLNEPVLPPKT
VDVNVMVVSVTPATSEEVKAPVAVEMQPSRGSPATQSKARWNTVHIAPPP
SYHSIAPVSTPSTVADGDSSWMRFKEAKQEDESTSAEQPYPVEQKSKSAP
PASSSPVAKRSPVVKSSPVAKSSPVVEETYDASAEEPEKPLSLVEQRRRM
YNKLADASDSPAPFPDLSFRSSSGRSISTSSSKQDLSKPRTPRYDDRQET
SVAKGYPSSAASAGPGVTLDDELRDSSRKDTLGGDFGISAVSSDHYENEG
QTATETGDQRSITKQNESLASTDVIIPSNYPANTIPEQSNGNVDMKVEGE
GGPTSLNASATVEDEPEIPMKERLAAAVARYRRIFKLGNNIGITSSPSFS
SHKNSSLPSADSADFSNGGGQERQRSTFFNRAKAVTGAWGIILTQNLDED
SDSEDEGPQVKEHELQAFSRLLDFWDNRRASATHAKGGEVILDDEETSPL
SEEDIIGIQSLLQKLEPKQIEDDVSEVEDEAVEPGGHTADVSPPQEEPME
TEGCANGSRVVGFDIPDSLEGNEARSNVSFADPVISRARALHDAPAVTFM
DSEEVTRSSVPPPPPPPPSLPSKSQRSYAPPPPPPPPPSASQKTNSGAGN
WTSRHVLPPPPPPPAYSRPQENDTNVVRMVDEVPEITSPDVQSPKVNKKS
LPTPRAEIVTFPDLEVPPSSVIGQKVNVPQQVDRRRMVVTESTLRDPFRP
QPPPMYQAPPRNSDAGSSHMDPDIESRVRQDTDAAIKRGGQAPQRLNADK
GGKKLRRKSSTHTPDKGIDYRTTLTRDSDSNADSKSGTSGMSITSKGHRK
SPSRDEHATRGLFTLGMFNRRRSSVMTSFESELAPEQCMLELGRTLMAMD
CEVLMKRGETKMKCEAPVKNVRLSLSILCTHQNGVSNVQFRRGKKDRSNI
DSKEFYDFCQMVQYRYQERIKGSSRKS*
back to top

spliced messenger RNA

>Gvermi6963.t1 ID=Gvermi6963.t1|Name=Gvermi6963.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=4584bp|location=Sequence derived from alignment at ScGOVlb_24229:757739..762464- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAAGCCGTGTCGGCAAGTATCTCCTGTTCGAGACCCTCGGCGAGGG
TGCCTTCGGCAAGGTCAAACTCGGCGTCCACGAAGAAACCGGCGAACAGG
TCGCCGTTAAGATTATGGACAAGAGCGACATCAAGGCCCAGGAGATGACT
ATGAACGTGCGCCGCGAAATCGCCATCATGAAGGCGCTTAAGCATCGCAA
CATTGTCAATCTACGTCAAGTTCTCACCAGTCACACTAAGCTCTATATTG
TCATGGACCTCGTCACTGGTGGTGAGTTGTTCACCAAGATTCTGAAAGAA
GGAAAGCTGCCGGAAAGGGTCGCACGTCGATACTTTCAGCAGCTCGTCGA
CGGCATCGAGTACTGTCACAGAAGGGGCGTTTGTCACAGGGATTTAAAAC
CGGAGAATCTTCTTATTGATGAAACTACTGGTGAGCTAAAGATCACCGAT
TTTGGCTTGTCGGCGATGAAAGGCGCAAGCACTACCGAAGAGCTTCTTCA
TACTCAGTGCGGTAGCCCCAATTATTGTGCGCCAGAAATTATTGCTCATC
ATAAGCAAGGTTACAATGGAGCTAAGGTTGATGCATGGTCTTGTGGTATA
ATACTCTTTGCTTTACTAGCTGGCTTCCTGCCATTCTATGATGAGAACAC
CAAAGTACTCTATCGTATGATTCAAAAGGAAGATGTCAAGTTTCCACGCA
AATTCCCGGAGGACGCAAGAGATCTAATTCTATGCCTTTTGCACAAAGAT
CCGGACAGGCGCTACACACTTGCCGACGTTAAGAGGCATCGCTGGTTTGC
TATCGATTATCACGGTGACGACGCACTGTCGAGATCAGGCGCAAGCCCTC
CTGTCAGTCGCAGACGGAGACGGGGTCACAGCCGCAGCAGGAGCACCGAC
CAGGGACCGCGTTCGTTTGAACCTCGAAAGAAGTCTGACAAATCCGATGC
AGGAAGCGCATCCGGGAGCACCTCCGATGCTACTTCCAATCCTGTGGATA
CAACTGCTACCCCTTCACTACCGATGGATTCCGGTCAGCATGGTTCATCA
TCCTCACAGCGACCACCACTTGTGCCCGCGGTACGTGCACCTCACAGACC
TCAGCAAACAATTCCGCCATTGCCGCCACGGGTACCTCCGCCGCCACCCT
ATAGCGCAGTGAAGGCACCTTGCTCCCCAATACGTGAGAAAGCACCTGCA
CCGCCCGCTATTATACCGGCTGTTCATGTCTCACATCATGTCACCCCGTC
CGCACGCCCGGTCGGGCGGTACAACGATGCTATTCGTCGCCACCCTGTCC
AAGAACATCAATTGCGGCAGTCACCCGTGCCTCATCCGCATCCAACCTTT
GTTCATGGGACCGTCACACCTTCTGTTTCAGCCCCGGGTGGCTCACCAGA
GTCAGGGAATGCCTCTGTTGAAGACAACACCGCACCAGTTACAGATCCCA
CGGGTACATATCCGGTGCCTTCACCCCCTAGCAATCTTCAGCCTGCAGCC
GCACCCCCGCCACCGCCCTTCCCAGCTCCGTATGATGCTTCTTCTAGTCC
GAACATGACTGGAAACACTTCGCCAACGTCGGCACTGATCGGGAAGATTT
CTTTAAATAACACCAAGTCACCATTGACCGAGGCAGTGCAGTCAGGTTCA
GAATCTGTATCCGGAAGCATTCGTCCTGTTTCATCGCCGCCATTGAGCTC
TACATCATCTGAAAATGTCGCAAAACAGCCTAATGTGAGCAAGGTTACAC
ATCCGGTTCCCCAAAATGTGCTGAATGAACCTGTATTGCCACCAAAAACA
GTCGATGTGAATGTCATGGTTGTTTCCGTCACACCAGCGACTAGTGAGGA
AGTGAAGGCCCCGGTTGCTGTGGAAATGCAGCCCTCGAGGGGTTCTCCAG
CCACACAATCCAAGGCAAGATGGAACACTGTTCATATCGCACCTCCACCG
TCATATCACTCCATTGCACCAGTCTCAACTCCATCGACTGTGGCAGATGG
TGACTCTTCCTGGATGAGATTTAAAGAGGCGAAGCAAGAAGATGAATCGA
CAAGTGCTGAGCAGCCATATCCTGTGGAACAGAAGTCGAAGTCTGCCCCG
CCTGCCTCGAGCTCCCCCGTTGCGAAACGTTCCCCCGTTGTGAAAAGTTC
CCCCGTTGCGAAAAGTTCCCCCGTTGTGGAAGAAACTTATGATGCTAGTG
CGGAAGAGCCCGAAAAACCCCTTTCTCTTGTGGAGCAGCGCCGTAGAATG
TACAACAAACTTGCTGATGCATCTGATTCCCCTGCACCGTTTCCAGACTT
GAGCTTCAGGTCCTCTTCAGGACGATCTATAAGTACTTCTTCCTCAAAGC
AAGATTTATCAAAACCTCGTACTCCACGGTATGATGACAGACAAGAAACG
TCTGTTGCAAAAGGGTACCCATCGTCAGCTGCAAGTGCGGGCCCTGGTGT
AACTCTCGACGACGAACTTCGAGATTCGTCTCGAAAAGACACACTGGGGG
GAGATTTTGGCATCAGTGCGGTTTCTTCCGATCATTACGAAAACGAGGGA
CAAACAGCCACAGAGACTGGCGATCAACGCTCAATAACAAAACAGAACGA
ATCTCTCGCATCAACTGATGTCATAATCCCATCGAATTATCCAGCCAATA
CGATACCTGAACAAAGTAACGGGAATGTCGATATGAAAGTTGAAGGCGAG
GGGGGTCCAACCAGCTTGAACGCCTCTGCTACTGTGGAGGACGAGCCTGA
AATACCAATGAAGGAGCGGCTCGCAGCAGCAGTGGCCAGATATCGCAGAA
TATTTAAGCTCGGAAACAACATTGGAATTACATCTTCTCCTAGTTTCTCT
TCGCACAAGAACAGTTCATTGCCATCTGCGGACAGTGCAGACTTCTCTAA
CGGAGGCGGCCAAGAAAGGCAGCGTAGTACGTTCTTTAATCGTGCGAAGG
CTGTTACTGGAGCTTGGGGGATTATACTTACTCAGAACTTGGATGAAGAC
AGTGATTCCGAAGATGAAGGCCCTCAAGTGAAGGAACATGAGCTTCAAGC
TTTCAGTCGACTTCTTGACTTTTGGGACAATCGTCGAGCAAGCGCCACTC
ACGCTAAAGGTGGTGAAGTCATTTTGGATGACGAGGAAACATCTCCGCTA
TCTGAGGAGGATATTATTGGGATTCAGTCTCTGTTGCAAAAGCTTGAACC
AAAGCAAATCGAAGATGATGTCAGTGAAGTTGAGGATGAAGCTGTGGAAC
CCGGGGGTCATACTGCCGATGTATCTCCCCCTCAGGAGGAGCCAATGGAA
ACCGAAGGTTGTGCAAATGGATCTCGCGTTGTTGGCTTTGATATACCCGA
TAGTCTTGAAGGCAATGAAGCTAGAAGCAATGTGTCATTTGCCGATCCAG
TAATTAGTCGTGCACGCGCTTTGCATGACGCCCCAGCTGTGACTTTTATG
GACTCTGAAGAAGTCACGCGGTCGTCTGTTCCACCACCACCTCCACCACC
CCCATCACTGCCATCTAAGTCACAAAGATCATATGCACCACCGCCACCAC
CACCACCACCGCCTTCCGCATCGCAGAAGACAAATTCAGGTGCTGGAAAC
TGGACATCAAGGCATGTGTTACCTCCTCCACCGCCTCCTCCAGCTTACTC
GCGCCCACAGGAAAATGATACAAACGTTGTTAGAATGGTGGACGAAGTTC
CAGAAATTACTTCACCGGACGTGCAGTCTCCCAAAGTGAACAAGAAATCC
TTGCCAACACCGCGGGCTGAAATCGTTACTTTTCCGGATTTAGAAGTTCC
TCCCTCATCCGTGATTGGGCAAAAAGTGAATGTTCCACAACAAGTCGATA
GAAGGCGTATGGTCGTGACAGAGTCAACGCTCAGAGACCCCTTTAGACCT
CAACCCCCTCCCATGTATCAGGCACCGCCTCGAAACAGTGATGCTGGCTC
TAGCCATATGGATCCAGATATTGAATCCAGGGTTCGGCAAGATACAGATG
CAGCCATCAAGCGAGGCGGCCAAGCTCCGCAGCGTTTGAATGCAGATAAA
GGTGGAAAGAAACTGCGACGAAAGAGTTCTACGCACACCCCAGATAAAGG
CATCGATTATCGTACAACTTTGACAAGGGACTCGGATTCCAATGCAGATT
CGAAATCCGGAACGTCAGGCATGTCAATCACTAGCAAAGGTCATCGGAAG
TCACCATCGAGAGATGAGCATGCAACGAGGGGCCTGTTTACTCTGGGGAT
GTTCAATCGTCGACGAAGTTCTGTTATGACGAGTTTTGAGTCAGAACTTG
CCCCAGAGCAATGCATGCTTGAACTTGGAAGGACCCTCATGGCAATGGAT
TGCGAAGTACTCATGAAAAGGGGAGAGACCAAGATGAAATGTGAGGCACC
TGTGAAAAACGTCAGGTTGTCACTTAGTATTCTTTGCACCCATCAAAACG
GGGTGTCGAATGTTCAGTTTCGACGAGGGAAGAAAGACAGATCGAACATT
GACTCGAAGGAGTTTTATGATTTCTGTCAAATGGTTCAGTATCGGTACCA
AGAACGTATTAAGGGTTCGTCACGCAAGTCATAA
back to top

protein sequence of Gvermi6963.t1

>Gvermi6963.t1 ID=Gvermi6963.t1|Name=Gvermi6963.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1528bp
MASRVGKYLLFETLGEGAFGKVKLGVHEETGEQVAVKIMDKSDIKAQEMT
MNVRREIAIMKALKHRNIVNLRQVLTSHTKLYIVMDLVTGGELFTKILKE
GKLPERVARRYFQQLVDGIEYCHRRGVCHRDLKPENLLIDETTGELKITD
FGLSAMKGASTTEELLHTQCGSPNYCAPEIIAHHKQGYNGAKVDAWSCGI
ILFALLAGFLPFYDENTKVLYRMIQKEDVKFPRKFPEDARDLILCLLHKD
PDRRYTLADVKRHRWFAIDYHGDDALSRSGASPPVSRRRRRGHSRSRSTD
QGPRSFEPRKKSDKSDAGSASGSTSDATSNPVDTTATPSLPMDSGQHGSS
SSQRPPLVPAVRAPHRPQQTIPPLPPRVPPPPPYSAVKAPCSPIREKAPA
PPAIIPAVHVSHHVTPSARPVGRYNDAIRRHPVQEHQLRQSPVPHPHPTF
VHGTVTPSVSAPGGSPESGNASVEDNTAPVTDPTGTYPVPSPPSNLQPAA
APPPPPFPAPYDASSSPNMTGNTSPTSALIGKISLNNTKSPLTEAVQSGS
ESVSGSIRPVSSPPLSSTSSENVAKQPNVSKVTHPVPQNVLNEPVLPPKT
VDVNVMVVSVTPATSEEVKAPVAVEMQPSRGSPATQSKARWNTVHIAPPP
SYHSIAPVSTPSTVADGDSSWMRFKEAKQEDESTSAEQPYPVEQKSKSAP
PASSSPVAKRSPVVKSSPVAKSSPVVEETYDASAEEPEKPLSLVEQRRRM
YNKLADASDSPAPFPDLSFRSSSGRSISTSSSKQDLSKPRTPRYDDRQET
SVAKGYPSSAASAGPGVTLDDELRDSSRKDTLGGDFGISAVSSDHYENEG
QTATETGDQRSITKQNESLASTDVIIPSNYPANTIPEQSNGNVDMKVEGE
GGPTSLNASATVEDEPEIPMKERLAAAVARYRRIFKLGNNIGITSSPSFS
SHKNSSLPSADSADFSNGGGQERQRSTFFNRAKAVTGAWGIILTQNLDED
SDSEDEGPQVKEHELQAFSRLLDFWDNRRASATHAKGGEVILDDEETSPL
SEEDIIGIQSLLQKLEPKQIEDDVSEVEDEAVEPGGHTADVSPPQEEPME
TEGCANGSRVVGFDIPDSLEGNEARSNVSFADPVISRARALHDAPAVTFM
DSEEVTRSSVPPPPPPPPSLPSKSQRSYAPPPPPPPPPSASQKTNSGAGN
WTSRHVLPPPPPPPAYSRPQENDTNVVRMVDEVPEITSPDVQSPKVNKKS
LPTPRAEIVTFPDLEVPPSSVIGQKVNVPQQVDRRRMVVTESTLRDPFRP
QPPPMYQAPPRNSDAGSSHMDPDIESRVRQDTDAAIKRGGQAPQRLNADK
GGKKLRRKSSTHTPDKGIDYRTTLTRDSDSNADSKSGTSGMSITSKGHRK
SPSRDEHATRGLFTLGMFNRRRSSVMTSFESELAPEQCMLELGRTLMAMD
CEVLMKRGETKMKCEAPVKNVRLSLSILCTHQNGVSNVQFRRGKKDRSNI
DSKEFYDFCQMVQYRYQERIKGSSRKS*
back to top

mRNA from alignment at ScGOVlb_24229:757739..762464-

Legend: polypeptideCDSexonstart_codonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi6963.t1 ID=Gvermi6963.t1|Name=Gvermi6963.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=4726bp|location=Sequence derived from alignment at ScGOVlb_24229:757739..762464- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGGCAAGCCGTGTCGGCAAGTATCTCCTGTTCGAGACCCTCGGCGAGGG TGCCTTCGGCAAGTAAGTTACTCCTCTTTCCCTCTCTTACACCGCACGCA CTAGTTCTTCACACTGATCGTGCCCCGTTCGCTCGCCAGTCATGCTAACC ACTCACGTGTCACTTCCCAACGCAATCCCCCAACCATCGCCCGCCGTCAA TCAGGGTCAAACTCGGCGTCCACGAAGAAACCGGCGAACAGGTCGCCGTT AAGATTATGGACAAGAGCGACATCAAGGCCCAGGAGATGACTATGAACGT GCGCCGCGAAATCGCCATCATGAAGGCGCTTAAGCATCGCAACATTGTCA ATCTACGTCAAGTTCTCACCAGTCACACTAAGCTCTATATTGTCATGGAC CTCGTCACTGGTGGTGAGTTGTTCACCAAGATTCTGAAAGAAGGAAAGCT GCCGGAAAGGGTCGCACGTCGATACTTTCAGCAGCTCGTCGACGGCATCG AGTACTGTCACAGAAGGGGCGTTTGTCACAGGGATTTAAAACCGGAGAAT CTTCTTATTGATGAAACTACTGGTGAGCTAAAGATCACCGATTTTGGCTT GTCGGCGATGAAAGGCGCAAGCACTACCGAAGAGCTTCTTCATACTCAGT GCGGTAGCCCCAATTATTGTGCGCCAGAAATTATTGCTCATCATAAGCAA GGTTACAATGGAGCTAAGGTTGATGCATGGTCTTGTGGTATAATACTCTT TGCTTTACTAGCTGGCTTCCTGCCATTCTATGATGAGAACACCAAAGTAC TCTATCGTATGATTCAAAAGGAAGATGTCAAGTTTCCACGCAAATTCCCG GAGGACGCAAGAGATCTAATTCTATGCCTTTTGCACAAAGATCCGGACAG GCGCTACACACTTGCCGACGTTAAGAGGCATCGCTGGTTTGCTATCGATT ATCACGGTGACGACGCACTGTCGAGATCAGGCGCAAGCCCTCCTGTCAGT CGCAGACGGAGACGGGGTCACAGCCGCAGCAGGAGCACCGACCAGGGACC GCGTTCGTTTGAACCTCGAAAGAAGTCTGACAAATCCGATGCAGGAAGCG CATCCGGGAGCACCTCCGATGCTACTTCCAATCCTGTGGATACAACTGCT ACCCCTTCACTACCGATGGATTCCGGTCAGCATGGTTCATCATCCTCACA GCGACCACCACTTGTGCCCGCGGTACGTGCACCTCACAGACCTCAGCAAA CAATTCCGCCATTGCCGCCACGGGTACCTCCGCCGCCACCCTATAGCGCA GTGAAGGCACCTTGCTCCCCAATACGTGAGAAAGCACCTGCACCGCCCGC TATTATACCGGCTGTTCATGTCTCACATCATGTCACCCCGTCCGCACGCC CGGTCGGGCGGTACAACGATGCTATTCGTCGCCACCCTGTCCAAGAACAT CAATTGCGGCAGTCACCCGTGCCTCATCCGCATCCAACCTTTGTTCATGG GACCGTCACACCTTCTGTTTCAGCCCCGGGTGGCTCACCAGAGTCAGGGA ATGCCTCTGTTGAAGACAACACCGCACCAGTTACAGATCCCACGGGTACA TATCCGGTGCCTTCACCCCCTAGCAATCTTCAGCCTGCAGCCGCACCCCC GCCACCGCCCTTCCCAGCTCCGTATGATGCTTCTTCTAGTCCGAACATGA CTGGAAACACTTCGCCAACGTCGGCACTGATCGGGAAGATTTCTTTAAAT AACACCAAGTCACCATTGACCGAGGCAGTGCAGTCAGGTTCAGAATCTGT ATCCGGAAGCATTCGTCCTGTTTCATCGCCGCCATTGAGCTCTACATCAT CTGAAAATGTCGCAAAACAGCCTAATGTGAGCAAGGTTACACATCCGGTT CCCCAAAATGTGCTGAATGAACCTGTATTGCCACCAAAAACAGTCGATGT GAATGTCATGGTTGTTTCCGTCACACCAGCGACTAGTGAGGAAGTGAAGG CCCCGGTTGCTGTGGAAATGCAGCCCTCGAGGGGTTCTCCAGCCACACAA TCCAAGGCAAGATGGAACACTGTTCATATCGCACCTCCACCGTCATATCA CTCCATTGCACCAGTCTCAACTCCATCGACTGTGGCAGATGGTGACTCTT CCTGGATGAGATTTAAAGAGGCGAAGCAAGAAGATGAATCGACAAGTGCT GAGCAGCCATATCCTGTGGAACAGAAGTCGAAGTCTGCCCCGCCTGCCTC GAGCTCCCCCGTTGCGAAACGTTCCCCCGTTGTGAAAAGTTCCCCCGTTG CGAAAAGTTCCCCCGTTGTGGAAGAAACTTATGATGCTAGTGCGGAAGAG CCCGAAAAACCCCTTTCTCTTGTGGAGCAGCGCCGTAGAATGTACAACAA ACTTGCTGATGCATCTGATTCCCCTGCACCGTTTCCAGACTTGAGCTTCA GGTCCTCTTCAGGACGATCTATAAGTACTTCTTCCTCAAAGCAAGATTTA TCAAAACCTCGTACTCCACGGTATGATGACAGACAAGAAACGTCTGTTGC AAAAGGGTACCCATCGTCAGCTGCAAGTGCGGGCCCTGGTGTAACTCTCG ACGACGAACTTCGAGATTCGTCTCGAAAAGACACACTGGGGGGAGATTTT GGCATCAGTGCGGTTTCTTCCGATCATTACGAAAACGAGGGACAAACAGC CACAGAGACTGGCGATCAACGCTCAATAACAAAACAGAACGAATCTCTCG CATCAACTGATGTCATAATCCCATCGAATTATCCAGCCAATACGATACCT GAACAAAGTAACGGGAATGTCGATATGAAAGTTGAAGGCGAGGGGGGTCC AACCAGCTTGAACGCCTCTGCTACTGTGGAGGACGAGCCTGAAATACCAA TGAAGGAGCGGCTCGCAGCAGCAGTGGCCAGATATCGCAGAATATTTAAG CTCGGAAACAACATTGGAATTACATCTTCTCCTAGTTTCTCTTCGCACAA GAACAGTTCATTGCCATCTGCGGACAGTGCAGACTTCTCTAACGGAGGCG GCCAAGAAAGGCAGCGTAGTACGTTCTTTAATCGTGCGAAGGCTGTTACT GGAGCTTGGGGGATTATACTTACTCAGAACTTGGATGAAGACAGTGATTC CGAAGATGAAGGCCCTCAAGTGAAGGAACATGAGCTTCAAGCTTTCAGTC GACTTCTTGACTTTTGGGACAATCGTCGAGCAAGCGCCACTCACGCTAAA GGTGGTGAAGTCATTTTGGATGACGAGGAAACATCTCCGCTATCTGAGGA GGATATTATTGGGATTCAGTCTCTGTTGCAAAAGCTTGAACCAAAGCAAA TCGAAGATGATGTCAGTGAAGTTGAGGATGAAGCTGTGGAACCCGGGGGT CATACTGCCGATGTATCTCCCCCTCAGGAGGAGCCAATGGAAACCGAAGG TTGTGCAAATGGATCTCGCGTTGTTGGCTTTGATATACCCGATAGTCTTG AAGGCAATGAAGCTAGAAGCAATGTGTCATTTGCCGATCCAGTAATTAGT CGTGCACGCGCTTTGCATGACGCCCCAGCTGTGACTTTTATGGACTCTGA AGAAGTCACGCGGTCGTCTGTTCCACCACCACCTCCACCACCCCCATCAC TGCCATCTAAGTCACAAAGATCATATGCACCACCGCCACCACCACCACCA CCGCCTTCCGCATCGCAGAAGACAAATTCAGGTGCTGGAAACTGGACATC AAGGCATGTGTTACCTCCTCCACCGCCTCCTCCAGCTTACTCGCGCCCAC AGGAAAATGATACAAACGTTGTTAGAATGGTGGACGAAGTTCCAGAAATT ACTTCACCGGACGTGCAGTCTCCCAAAGTGAACAAGAAATCCTTGCCAAC ACCGCGGGCTGAAATCGTTACTTTTCCGGATTTAGAAGTTCCTCCCTCAT CCGTGATTGGGCAAAAAGTGAATGTTCCACAACAAGTCGATAGAAGGCGT ATGGTCGTGACAGAGTCAACGCTCAGAGACCCCTTTAGACCTCAACCCCC TCCCATGTATCAGGCACCGCCTCGAAACAGTGATGCTGGCTCTAGCCATA TGGATCCAGATATTGAATCCAGGGTTCGGCAAGATACAGATGCAGCCATC AAGCGAGGCGGCCAAGCTCCGCAGCGTTTGAATGCAGATAAAGGTGGAAA GAAACTGCGACGAAAGAGTTCTACGCACACCCCAGATAAAGGCATCGATT ATCGTACAACTTTGACAAGGGACTCGGATTCCAATGCAGATTCGAAATCC GGAACGTCAGGCATGTCAATCACTAGCAAAGGTCATCGGAAGTCACCATC GAGAGATGAGCATGCAACGAGGGGCCTGTTTACTCTGGGGATGTTCAATC GTCGACGAAGTTCTGTTATGACGAGTTTTGAGTCAGAACTTGCCCCAGAG CAATGCATGCTTGAACTTGGAAGGACCCTCATGGCAATGGATTGCGAAGT ACTCATGAAAAGGGGAGAGACCAAGATGAAATGTGAGGCACCTGTGAAAA ACGTCAGGTTGTCACTTAGTATTCTTTGCACCCATCAAAACGGGGTGTCG AATGTTCAGTTTCGACGAGGGAAGAAAGACAGATCGAACATTGACTCGAA GGAGTTTTATGATTTCTGTCAAATGGTTCAGTATCGGTACCAAGAACGTA TTAAGGGTTCGTCACGCAAGTCATAA
back to top

Coding sequence (CDS) from alignment at ScGOVlb_24229:757739..762464-

>Gvermi6963.t1 ID=Gvermi6963.t1|Name=Gvermi6963.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=4584bp|location=Sequence derived from alignment at ScGOVlb_24229:757739..762464- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGGCAAGCCGTGTCGGCAAGTATCTCCTGTTCGAGACCCTCGGCGAGGG
TGCCTTCGGCAAGGTCAAACTCGGCGTCCACGAAGAAACCGGCGAACAGG
TCGCCGTTAAGATTATGGACAAGAGCGACATCAAGGCCCAGGAGATGACT
ATGAACGTGCGCCGCGAAATCGCCATCATGAAGGCGCTTAAGCATCGCAA
CATTGTCAATCTACGTCAAGTTCTCACCAGTCACACTAAGCTCTATATTG
TCATGGACCTCGTCACTGGTGGTGAGTTGTTCACCAAGATTCTGAAAGAA
GGAAAGCTGCCGGAAAGGGTCGCACGTCGATACTTTCAGCAGCTCGTCGA
CGGCATCGAGTACTGTCACAGAAGGGGCGTTTGTCACAGGGATTTAAAAC
CGGAGAATCTTCTTATTGATGAAACTACTGGTGAGCTAAAGATCACCGAT
TTTGGCTTGTCGGCGATGAAAGGCGCAAGCACTACCGAAGAGCTTCTTCA
TACTCAGTGCGGTAGCCCCAATTATTGTGCGCCAGAAATTATTGCTCATC
ATAAGCAAGGTTACAATGGAGCTAAGGTTGATGCATGGTCTTGTGGTATA
ATACTCTTTGCTTTACTAGCTGGCTTCCTGCCATTCTATGATGAGAACAC
CAAAGTACTCTATCGTATGATTCAAAAGGAAGATGTCAAGTTTCCACGCA
AATTCCCGGAGGACGCAAGAGATCTAATTCTATGCCTTTTGCACAAAGAT
CCGGACAGGCGCTACACACTTGCCGACGTTAAGAGGCATCGCTGGTTTGC
TATCGATTATCACGGTGACGACGCACTGTCGAGATCAGGCGCAAGCCCTC
CTGTCAGTCGCAGACGGAGACGGGGTCACAGCCGCAGCAGGAGCACCGAC
CAGGGACCGCGTTCGTTTGAACCTCGAAAGAAGTCTGACAAATCCGATGC
AGGAAGCGCATCCGGGAGCACCTCCGATGCTACTTCCAATCCTGTGGATA
CAACTGCTACCCCTTCACTACCGATGGATTCCGGTCAGCATGGTTCATCA
TCCTCACAGCGACCACCACTTGTGCCCGCGGTACGTGCACCTCACAGACC
TCAGCAAACAATTCCGCCATTGCCGCCACGGGTACCTCCGCCGCCACCCT
ATAGCGCAGTGAAGGCACCTTGCTCCCCAATACGTGAGAAAGCACCTGCA
CCGCCCGCTATTATACCGGCTGTTCATGTCTCACATCATGTCACCCCGTC
CGCACGCCCGGTCGGGCGGTACAACGATGCTATTCGTCGCCACCCTGTCC
AAGAACATCAATTGCGGCAGTCACCCGTGCCTCATCCGCATCCAACCTTT
GTTCATGGGACCGTCACACCTTCTGTTTCAGCCCCGGGTGGCTCACCAGA
GTCAGGGAATGCCTCTGTTGAAGACAACACCGCACCAGTTACAGATCCCA
CGGGTACATATCCGGTGCCTTCACCCCCTAGCAATCTTCAGCCTGCAGCC
GCACCCCCGCCACCGCCCTTCCCAGCTCCGTATGATGCTTCTTCTAGTCC
GAACATGACTGGAAACACTTCGCCAACGTCGGCACTGATCGGGAAGATTT
CTTTAAATAACACCAAGTCACCATTGACCGAGGCAGTGCAGTCAGGTTCA
GAATCTGTATCCGGAAGCATTCGTCCTGTTTCATCGCCGCCATTGAGCTC
TACATCATCTGAAAATGTCGCAAAACAGCCTAATGTGAGCAAGGTTACAC
ATCCGGTTCCCCAAAATGTGCTGAATGAACCTGTATTGCCACCAAAAACA
GTCGATGTGAATGTCATGGTTGTTTCCGTCACACCAGCGACTAGTGAGGA
AGTGAAGGCCCCGGTTGCTGTGGAAATGCAGCCCTCGAGGGGTTCTCCAG
CCACACAATCCAAGGCAAGATGGAACACTGTTCATATCGCACCTCCACCG
TCATATCACTCCATTGCACCAGTCTCAACTCCATCGACTGTGGCAGATGG
TGACTCTTCCTGGATGAGATTTAAAGAGGCGAAGCAAGAAGATGAATCGA
CAAGTGCTGAGCAGCCATATCCTGTGGAACAGAAGTCGAAGTCTGCCCCG
CCTGCCTCGAGCTCCCCCGTTGCGAAACGTTCCCCCGTTGTGAAAAGTTC
CCCCGTTGCGAAAAGTTCCCCCGTTGTGGAAGAAACTTATGATGCTAGTG
CGGAAGAGCCCGAAAAACCCCTTTCTCTTGTGGAGCAGCGCCGTAGAATG
TACAACAAACTTGCTGATGCATCTGATTCCCCTGCACCGTTTCCAGACTT
GAGCTTCAGGTCCTCTTCAGGACGATCTATAAGTACTTCTTCCTCAAAGC
AAGATTTATCAAAACCTCGTACTCCACGGTATGATGACAGACAAGAAACG
TCTGTTGCAAAAGGGTACCCATCGTCAGCTGCAAGTGCGGGCCCTGGTGT
AACTCTCGACGACGAACTTCGAGATTCGTCTCGAAAAGACACACTGGGGG
GAGATTTTGGCATCAGTGCGGTTTCTTCCGATCATTACGAAAACGAGGGA
CAAACAGCCACAGAGACTGGCGATCAACGCTCAATAACAAAACAGAACGA
ATCTCTCGCATCAACTGATGTCATAATCCCATCGAATTATCCAGCCAATA
CGATACCTGAACAAAGTAACGGGAATGTCGATATGAAAGTTGAAGGCGAG
GGGGGTCCAACCAGCTTGAACGCCTCTGCTACTGTGGAGGACGAGCCTGA
AATACCAATGAAGGAGCGGCTCGCAGCAGCAGTGGCCAGATATCGCAGAA
TATTTAAGCTCGGAAACAACATTGGAATTACATCTTCTCCTAGTTTCTCT
TCGCACAAGAACAGTTCATTGCCATCTGCGGACAGTGCAGACTTCTCTAA
CGGAGGCGGCCAAGAAAGGCAGCGTAGTACGTTCTTTAATCGTGCGAAGG
CTGTTACTGGAGCTTGGGGGATTATACTTACTCAGAACTTGGATGAAGAC
AGTGATTCCGAAGATGAAGGCCCTCAAGTGAAGGAACATGAGCTTCAAGC
TTTCAGTCGACTTCTTGACTTTTGGGACAATCGTCGAGCAAGCGCCACTC
ACGCTAAAGGTGGTGAAGTCATTTTGGATGACGAGGAAACATCTCCGCTA
TCTGAGGAGGATATTATTGGGATTCAGTCTCTGTTGCAAAAGCTTGAACC
AAAGCAAATCGAAGATGATGTCAGTGAAGTTGAGGATGAAGCTGTGGAAC
CCGGGGGTCATACTGCCGATGTATCTCCCCCTCAGGAGGAGCCAATGGAA
ACCGAAGGTTGTGCAAATGGATCTCGCGTTGTTGGCTTTGATATACCCGA
TAGTCTTGAAGGCAATGAAGCTAGAAGCAATGTGTCATTTGCCGATCCAG
TAATTAGTCGTGCACGCGCTTTGCATGACGCCCCAGCTGTGACTTTTATG
GACTCTGAAGAAGTCACGCGGTCGTCTGTTCCACCACCACCTCCACCACC
CCCATCACTGCCATCTAAGTCACAAAGATCATATGCACCACCGCCACCAC
CACCACCACCGCCTTCCGCATCGCAGAAGACAAATTCAGGTGCTGGAAAC
TGGACATCAAGGCATGTGTTACCTCCTCCACCGCCTCCTCCAGCTTACTC
GCGCCCACAGGAAAATGATACAAACGTTGTTAGAATGGTGGACGAAGTTC
CAGAAATTACTTCACCGGACGTGCAGTCTCCCAAAGTGAACAAGAAATCC
TTGCCAACACCGCGGGCTGAAATCGTTACTTTTCCGGATTTAGAAGTTCC
TCCCTCATCCGTGATTGGGCAAAAAGTGAATGTTCCACAACAAGTCGATA
GAAGGCGTATGGTCGTGACAGAGTCAACGCTCAGAGACCCCTTTAGACCT
CAACCCCCTCCCATGTATCAGGCACCGCCTCGAAACAGTGATGCTGGCTC
TAGCCATATGGATCCAGATATTGAATCCAGGGTTCGGCAAGATACAGATG
CAGCCATCAAGCGAGGCGGCCAAGCTCCGCAGCGTTTGAATGCAGATAAA
GGTGGAAAGAAACTGCGACGAAAGAGTTCTACGCACACCCCAGATAAAGG
CATCGATTATCGTACAACTTTGACAAGGGACTCGGATTCCAATGCAGATT
CGAAATCCGGAACGTCAGGCATGTCAATCACTAGCAAAGGTCATCGGAAG
TCACCATCGAGAGATGAGCATGCAACGAGGGGCCTGTTTACTCTGGGGAT
GTTCAATCGTCGACGAAGTTCTGTTATGACGAGTTTTGAGTCAGAACTTG
CCCCAGAGCAATGCATGCTTGAACTTGGAAGGACCCTCATGGCAATGGAT
TGCGAAGTACTCATGAAAAGGGGAGAGACCAAGATGAAATGTGAGGCACC
TGTGAAAAACGTCAGGTTGTCACTTAGTATTCTTTGCACCCATCAAAACG
GGGTGTCGAATGTTCAGTTTCGACGAGGGAAGAAAGACAGATCGAACATT
GACTCGAAGGAGTTTTATGATTTCTGTCAAATGGTTCAGTATCGGTACCA
AGAACGTATTAAGGGTTCGTCACGCAAGTCATAA
back to top