Gvermi677.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi677.t1
Unique NameGvermi677.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length168
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_6435contigScGOVlb_6435:368..869 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi677Gvermi677Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_6435 368..869 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi677.t1.start1Gvermi677.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_6435 368..370 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi677.t1.CDS1Gvermi677.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_6435 368..869 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi677.t1.exon1Gvermi677.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_6435 368..869 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi677.t1Gvermi677.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_6435 368..869 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi677.t1 ID=Gvermi677.t1|Name=Gvermi677.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=168bp
MLIGKTQTSPIEYDSLYPNMKESRKVDAMKRKAMAQNNNAKKEIVKARKM
HKKACKTHEVQVKRLGKMEKSFSTVEKQVQKANTGVSKQMKKHETMKTRH
KEMIERAEKAMKKKMEVLAKRRKVVKNDEFKFLQMKAALKNKGAAHQKRL
DKASARITELKKRLRKLX
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spliced messenger RNA

>Gvermi677.t1 ID=Gvermi677.t1|Name=Gvermi677.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=502bp|location=Sequence derived from alignment at ScGOVlb_6435:368..869+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTAATTGGAAAAACGCAAACTTCCCCTATTGAATACGACTCGCTGTA
CCCAAACATGAAAGAATCAAGGAAAGTCGATGCGATGAAGCGCAAGGCTA
TGGCCCAGAACAACAACGCCAAGAAGGAAATAGTTAAAGCGCGTAAAATG
CACAAGAAAGCATGCAAGACTCACGAAGTTCAGGTGAAGCGTCTCGGTAA
AATGGAGAAATCCTTTTCCACGGTCGAAAAACAGGTCCAGAAAGCTAATA
CGGGAGTTTCCAAGCAAATGAAGAAACACGAGACGATGAAAACTAGGCAC
AAAGAGATGATCGAGAGGGCCGAGAAGGCGATGAAGAAGAAGATGGAAGT
GCTCGCGAAACGCCGCAAAGTTGTCAAGAACGACGAATTTAAGTTCTTGC
AAATGAAGGCTGCTCTGAAAAACAAGGGTGCCGCTCATCAAAAGAGGCTG
GACAAGGCCAGTGCGAGAATCACTGAGCTTAAGAAGCGTCTCAGAAAACT
CG
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protein sequence of Gvermi677.t1

>Gvermi677.t1 ID=Gvermi677.t1|Name=Gvermi677.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=168bp
MLIGKTQTSPIEYDSLYPNMKESRKVDAMKRKAMAQNNNAKKEIVKARKM
HKKACKTHEVQVKRLGKMEKSFSTVEKQVQKANTGVSKQMKKHETMKTRH
KEMIERAEKAMKKKMEVLAKRRKVVKNDEFKFLQMKAALKNKGAAHQKRL
DKASARITELKKRLRKLX
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mRNA from alignment at ScGOVlb_6435:368..869+

Legend: start_codonpolypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi677.t1 ID=Gvermi677.t1|Name=Gvermi677.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=502bp|location=Sequence derived from alignment at ScGOVlb_6435:368..869+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGTTAATTGGAAAAACGCAAACTTCCCCTATTGAATACGACTCGCTGTA
CCCAAACATGAAAGAATCAAGGAAAGTCGATGCGATGAAGCGCAAGGCTA
TGGCCCAGAACAACAACGCCAAGAAGGAAATAGTTAAAGCGCGTAAAATG
CACAAGAAAGCATGCAAGACTCACGAAGTTCAGGTGAAGCGTCTCGGTAA
AATGGAGAAATCCTTTTCCACGGTCGAAAAACAGGTCCAGAAAGCTAATA
CGGGAGTTTCCAAGCAAATGAAGAAACACGAGACGATGAAAACTAGGCAC
AAAGAGATGATCGAGAGGGCCGAGAAGGCGATGAAGAAGAAGATGGAAGT
GCTCGCGAAACGCCGCAAAGTTGTCAAGAACGACGAATTTAAGTTCTTGC
AAATGAAGGCTGCTCTGAAAAACAAGGGTGCCGCTCATCAAAAGAGGCTG
GACAAGGCCAGTGCGAGAATCACTGAGCTTAAGAAGCGTCTCAGAAAACT
CG
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Coding sequence (CDS) from alignment at ScGOVlb_6435:368..869+

>Gvermi677.t1 ID=Gvermi677.t1|Name=Gvermi677.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=502bp|location=Sequence derived from alignment at ScGOVlb_6435:368..869+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGTTAATTGGAAAAACGCAAACTTCCCCTATTGAATACGACTCGCTGTA
CCCAAACATGAAAGAATCAAGGAAAGTCGATGCGATGAAGCGCAAGGCTA
TGGCCCAGAACAACAACGCCAAGAAGGAAATAGTTAAAGCGCGTAAAATG
CACAAGAAAGCATGCAAGACTCACGAAGTTCAGGTGAAGCGTCTCGGTAA
AATGGAGAAATCCTTTTCCACGGTCGAAAAACAGGTCCAGAAAGCTAATA
CGGGAGTTTCCAAGCAAATGAAGAAACACGAGACGATGAAAACTAGGCAC
AAAGAGATGATCGAGAGGGCCGAGAAGGCGATGAAGAAGAAGATGGAAGT
GCTCGCGAAACGCCGCAAAGTTGTCAAGAACGACGAATTTAAGTTCTTGC
AAATGAAGGCTGCTCTGAAAAACAAGGGTGCCGCTCATCAAAAGAGGCTG
GACAAGGCCAGTGCGAGAATCACTGAGCTTAAGAAGCGTCTCAGAAAACT
CG
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