Gvermi6620.t2 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi6620.t2
Unique NameGvermi6620.t2
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1781
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1737458..1742800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog38833.XP_003063158.1
PFAMsSel1
Max annot lvl2759|Eukaryota
Evalue1.26e-07
EggNOG OGs2D5IH@1|root,2SYP5@2759|Eukaryota
DescriptionSel1-like repeats.
COG categoryS
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6620Gvermi6620Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_88 1737458..1742800 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6620.t2.start1Gvermi6620.t2.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_88 1737458..1737460 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6620.t2.CDS1Gvermi6620.t2.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_88 1737458..1742800 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6620.t2.exon1Gvermi6620.t2.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_88 1737458..1742800 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6620.t2.stop1Gvermi6620.t2.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_88 1742798..1742800 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi6620.t2Gvermi6620.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_88 1737458..1742800 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi6620.t2 ID=Gvermi6620.t2|Name=Gvermi6620.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1781bp
MPAGIDVEKPSTRPRPPPYDPLLPSPPTHPTPMHQRQSSPNDKSNQLTVN
QTAVPMDTPHESPHDLFCLAKEYENRGRVSDAINLYLKAALNGHLSAMVS
YASHVISSDERAAFVWFQSAAVRGHPRAWVELGQLLARGRYFEVNAIDAA
RCWKRAAQMGDNTGKSALGLCYIRGFGVKQDSEKGLEIVRQVADVHNDVT
AMKNLAWIYRHGKGVTKNIQEAEYWENRAIKQQSIVDHLSSREKTLYGRG
RRAKSISSSHASEKSDAKSKPRTAPKPTVPSHPILEQEQIHDATDQSGEK
TTQEKKVRKPQPSRGSPQKVSSTGRESKQVRQQVSSSLPQGSNVQDQVKE
IERRHKAAMAEVESEIAASAYLFANKTPRRQQMPSSVPNTKIVHVATQTV
QVETKTIQDETGNIINRSTEKTFDRYSEDRAIRNGRDVLLTSAAHGSGNS
AKKAKGIEQPLAQEPYQVSISEAEIREVQQNALEKAANQERILFDDRAHG
KQSSEDTKTISHADNSEEIHPSVVHVDADQFADEPVDDSDEEPMHFGNEP
VEEGHHEKGEEEEEAEDEDEDDYEFVSGREEAKQEEEDEEEEDEEEEDEP
EKEEEEEDEQFITPDQSLHNASPSAQPLRVTEGVDATPTDAQEVITSIPS
PSHLNDVGDTSKASEDAALESIPFDQRVHSVAIGDPTTVRNVSNHTSPYT
HTGSTAQDTKDQKMSSEGPTTESSINPSTRYSEPKDYRETGKAGDFGHIR
ATYALGKEAHMNASQGEEDLMELEDEDMRNAADDHRKRENSFASGGTGGG
PVTEQAVPTISDLKEALGSYPRNPLRSDSQAPIFHLTSLLAVLPLRDMDA
YALLEKENAFAKVVVGMISQIEDEAIQEAGLLAIVRIVRTTQTGKKEELV
LSSYADCFRKVQGFSDAVIPSGTVGINVNGSGAIQAISQTMRRHSSTRHV
LLAGCAAFGEVASSSQKCREVAYEYDAVGLIVYSLRHRSSQASAIIHEAA
ARAASTMCTGKENIAYKEAFAKAGAVPELVSLLQLWGNNENASSDLHIAV
TRSICAAIRNLVEGCALASSQAIQSYAYHSLARALAFGRDNALLCSIIVI
ALTAITRNAATGAEKGLIDAKPLPEVLVAMQRHSRNPGFIRVSLDFMEAL
CNFNSMKAEIVQAGGIPFSADIIRQGGADNVLLEKACGVIEKLCFDSPEN
QESFAANKGIEGLSHLLSSHQTIPSVVEFALLALTAVCANSPQNQTEALK
NGCAEVLLRVLTSYSSKNAKVVAASCSAMQAMVVTKNATTAQAFGALQAA
ELIVRAMKRHTDSVAVQENGSAAVAAFCEADPNIISSLLKTGISSVLVVA
LQRFLHRQSAVIQIVRAMRAITNEVNEEDSYRFKSKLLTDRSNESSLAEI
FHTALSYHKKGLPGTANVIISICATINRLCMRSIAFKNEVGKDGIVEELT
RLVEKTAEFFEIKALQPVLATICTLVLDSEDNKNRFHAIGGVEAILDVMQ
KWKQDTYVLEHCCAALRYSCNDHFGNCDEVKIHNGVRSILGVMELYPENV
NVTLWCCLTLADLCKGDEELQSSPNVIQGIRKVISAMDMFSNNSRFLASA
CEFLRAASFENPGNQERVVRLGGRTAIVKALESHPEDNALTESGAYALLQ
VQHINQVRVSHDSAPQLGLVKRFSRELRRSGSNSSSRQSGKERTRKSLSF
IRRRRTNEKERDDAMANLSHTVGEQNPATRGSFFSRSRNRRNKKEKNRHE
PDDDEDDFGTGGARDGYGDLDAPSPEEEGD*
back to top

spliced messenger RNA

>Gvermi6620.t2 ID=Gvermi6620.t2|Name=Gvermi6620.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=5343bp|location=Sequence derived from alignment at ScGOVlb_88:1737458..1742800+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCAGCCGGAATCGACGTCGAGAAACCTTCCACGCGACCTCGGCCGCC
TCCGTACGACCCCCTGCTGCCGTCCCCACCTACACACCCGACGCCCATGC
ACCAGCGCCAGTCGAGTCCTAACGACAAGAGCAATCAGCTCACCGTCAAC
CAAACCGCCGTCCCCATGGATACCCCGCACGAAAGCCCACACGATCTCTT
CTGCCTTGCCAAAGAGTATGAGAATCGCGGCCGCGTGTCCGATGCCATCA
ACCTGTACCTCAAGGCTGCGCTCAACGGTCACTTGTCCGCCATGGTGTCG
TATGCATCGCACGTGATTTCTTCGGACGAGCGCGCCGCGTTCGTGTGGTT
TCAGTCAGCCGCTGTGCGAGGGCACCCACGTGCGTGGGTTGAGCTCGGCC
AGCTTTTGGCGCGAGGCCGATACTTTGAAGTCAATGCCATTGATGCTGCG
CGTTGCTGGAAGCGCGCTGCCCAGATGGGCGACAACACCGGCAAAAGTGC
GCTTGGTTTGTGTTACATTCGTGGCTTTGGGGTCAAACAGGACTCTGAGA
AGGGTCTGGAAATCGTGCGTCAGGTTGCCGACGTTCACAATGATGTCACT
GCCATGAAGAATCTCGCTTGGATTTACCGCCATGGCAAGGGCGTTACAAA
AAACATACAGGAAGCCGAGTACTGGGAGAATCGTGCTATCAAACAGCAAA
GTATTGTGGACCATTTATCTTCCAGGGAAAAGACGCTCTATGGACGTGGT
CGTCGCGCAAAGTCCATATCCTCGTCTCACGCTTCTGAAAAGAGTGACGC
CAAGAGCAAGCCTCGTACCGCGCCAAAACCCACAGTTCCAAGTCATCCTA
TTCTCGAACAGGAACAAATTCATGATGCCACGGACCAGTCAGGCGAGAAA
ACAACACAAGAAAAGAAAGTGCGAAAGCCACAACCTTCGCGAGGGTCTCC
TCAAAAGGTGTCAAGCACGGGTAGGGAATCGAAGCAAGTCCGTCAACAAG
TATCAAGCAGCCTCCCGCAGGGCTCAAATGTACAGGATCAGGTAAAGGAG
ATTGAGAGAAGACATAAAGCCGCAATGGCAGAGGTGGAGAGCGAAATCGC
GGCATCGGCCTATCTTTTCGCAAACAAGACACCTCGCCGACAGCAAATGC
CCTCTTCTGTGCCGAACACAAAGATTGTACACGTCGCGACACAAACGGTT
CAAGTCGAGACCAAAACTATTCAAGATGAAACTGGCAATATTATCAACCG
TTCAACCGAGAAAACTTTTGACAGGTACAGCGAGGACAGAGCCATTCGAA
ATGGTCGGGACGTTTTGCTCACATCTGCGGCACATGGCAGTGGAAATAGT
GCGAAGAAGGCAAAGGGTATTGAGCAACCACTCGCTCAGGAACCGTATCA
AGTGTCTATCAGTGAAGCCGAGATTCGAGAAGTACAGCAGAATGCACTCG
AAAAGGCAGCCAATCAGGAGCGAATACTATTTGACGACCGAGCGCATGGC
AAGCAATCGTCGGAAGACACCAAAACAATTAGTCATGCAGACAATAGTGA
AGAAATACATCCTTCCGTTGTTCACGTAGACGCTGACCAGTTTGCGGACG
AGCCTGTTGACGATTCTGACGAAGAGCCAATGCACTTTGGGAACGAACCC
GTGGAAGAAGGTCACCACGAGAAGGGCgaagaggaagaagaagcagaaga
cgaagacgaagacgactacgaattcgtaagtgggcgagaagaagcgaaac
aagaagaggaagacgaagaagaggaagacgaagaagaggaagacgaaccg
gaaaaggaagaggaagaggaggacgaacaaTTCATTACCCCGGACCAGAG
TTTGCATAACGCTTCCCCCTCTGCACAACCGCTTCGTGTTACGGAAGGAG
TGGATGCCACGCCCACAGATGCGCAGGAAGTCATTACTTCAATTCCTTCA
CCCTCTCATCTTAACGACGTAGGAGATACGAGCAAGGCTTCTGAAGACGC
GGCTCTAGAATCAATACCGTTCGACCAACGCGTTCACTCCGTTGCAATTG
GTGATCCAACGACTGTCCGAAACGTATCCAACCATACATCTCCTTATACG
CACACTGGTTCCACTGCACAAGACACGAAAGATCAGAAAATGTCCTCGGA
GGGACCAACGACCGAATCGAGTATTAATCCTTCAACGAGATATTCCGAAC
CTAAAGACTACAGGGAAACCGGCAAAGCCGGTGATTTTGGTCACATTCGG
GCGACATACGCGCTGGGTAAAGAAGCACATATGAACGCCTCTCAAGGAGA
GGAAGATCTGATGGAATTGGAAGATGAGGACATGAGAAACGCTGCGGACG
ATCACCGAAAGCGTGAAAATTCTTTTGCTTCAGGAGGCACCGGAGGGGGC
CCTGTCACAGAACAAGCTGTGCCAACTATATCAGATTTGAAGGAGGCTCT
CGGCTCGTATCCTCGAAATCCACTACGCTCTGACTCGCAAGCTCCCATAT
TTCATCTGACCAGCCTTTTGGCCGTACTTCCACTACGAGACATGGATGCT
TACGCGCTCCTCGAAAAGGAGAATGCTTTCGCGAAAGTGGTGGTTGGCAT
GATTTCTCAGATTGAAGACGAAGCAATTCAAGAAGCGGGCCTGCTTGCGA
TTGTTCGAATTGTGCGAACTACGCAGACCGGGAAGAAAGAAGAATTGGTG
CTGTCCTCATACGCCGACTGTTTCCGAAAAGTTCAAGGATTTTCTGACGC
AGTCATCCCAAGCGGTACGGTTGGGATCAATGTAAATGGTTCCGGGGCAA
TCCAAGCCATTTCGCAGACAATGCGTCGGCATTCGAGCACAAGACATGTT
TTACTCGCTGGCTGCGCTGCGTTTGGTGAAGTCGCTAGTTCTTCGCAGAA
ATGTCGAGAAGTTGCGTACGAATACGATGCGGTGGGGCTCATAGTGTACA
GCCTTCGACATAGGAGCTCTCAGGCGTCTGCCATTATTCATGAAGCTGCT
GCGAGGGCCGCATCTACCATGTGCACTGGCAAGGAAAACATAGCGTACAA
GGAGGCCTTCGCGAAAGCTGGAGCTGTTCCGGAACTAGTAAGTCTTCTTC
AATTATGGGGTAACAATGAGAATGCTTCATCTGATCTGCATATAGCTGTC
ACAAGAAGCATATGCGCCGCTATTCGTAACTTGGTAGAAGGATGTGCGTT
GGCAAGCTCTCAAGCTATACAATCTTATGCATATCACAGTTTGGCTCGTG
CTTTGGCTTTCGGTCGAGATAATGCTTTGTTATGCTCGATTATAGTCATA
GCATTAACCGCCATCACTCGGAACGCCGCTACTGGAGCCGAGAAGGGTCT
AATTGATGCGAAGCCTTTGCCCGAAGTGCTCGTAGCCATGCAACGCCATT
CGCGAAATCCAGGATTCATAAGGGTATCTTTAGATTTTATGGAAGCTCTA
TGCAATTTTAACTCAATGAAAGCGGAGATTGTTCAGGCCGGAGGGATTCC
GTTTTCAGCCGACATTATTAGACAAGGTGGAGCGGATAACGTCCTCCTTG
AAAAAGCATGTGGTGTAATTGAAAAGTTGTGCTTCGATAGCCCGGAAAAT
CAGGAATCATTCGCCGCTAACAAGGGAATCGAAGGACTTTCGCATCTACT
CAGTTCCCACCAGACCATTCCATCTGTTGTGGAATTTGCCTTGCTTGCTC
TGACTGCGGTTTGTGCAAACAGTCCCCAGAATCAAACGGAGGCTTTGAAG
AACGGCTGTGCAGAAGTGTTACTACGAGTATTAACCTCTTACAGTTCGAA
AAATGCAAAGGTTGTCGCTGCCTCATGTAGCGCTATGCAAGCAATGGTGG
TCACCAAAAACGCAACCACGGCTCAGGCATTTGGTGCACTACAAGCAGCT
GAGCTAATTGTTCGCGCAATGAAGAGACATACGGATAGTGTGGCAGTGCA
GGAGAACGGAAGCGCTGCCGTAGCAGCGTTTTGCGAGGCGGACCCAAATA
TCATTTCGTCACTGCTCAAAACCGGAATCTCGAGTGTTCTTGTGGTCGCC
TTACAGAGGTTTCTACACAGACAATCTGCAGTCATCCAGATTGTTCGTGC
GATGCGTGCAATTACAAACGAAGTGAATGAAGAAGATTCCTATAGATTCA
AATCAAAGCTGTTGACGGATCGTTCAAATGAATCATCGCTTGCCGAGATT
TTCCACACGGCGTTATCATACCACAAGAAAGGTTTACCAGGGACAGCAAA
CGTGATCATCAGCATCTGTGCAACTATAAATCGGTTATGTATGCGGAGCA
TCGCGTTCAAAAACGAAGTTGGAAAGGATGGCATTGTGGAAGAACTCACA
CGGCTTGTGGAAAAAACAGCCGAGTTCTTTGAAATCAAGGCGTTGCAACC
GGTCTTGGCAACAATTTGCACTTTGGTCCTGGATTCCGAAGACAATAAGA
ACCGTTTCCACGCAATTGGTGGGGTGGAGGCTATTCTGGATGTTATGCAA
AAATGGAAGCAAGACACTTATGTCTTAGAGCATTGTTGTGCTGCATTAAG
GTACTCCTGCAACGATCATTTCGGAAACTGTGATGAGGTGAAAATCCACA
ACGGCGTTCGAAGCATCCTTGGCGTCATGGAGCTATATCCAGAGAATGTG
AATGTGACATTGTGGTGTTGTTTGACTCTAGCCGACTTGTGTAAGGGAGA
TGAAGAACTGCAGTCCTCGCCTAACGTAATCCAGGGGATTCGAAAGGTTA
TCAGTGCCATGGATATGTTCTCTAACAACAGTAGATTCCTTGCAAGTGCG
TGCGAATTTTTGCGGGCTGCATCGTTCGAGAATCCCGGAAATCAGGAAAG
GGTTGTTCGGCTGGGTGGGCGCACGGCAATTGTGAAAGCACTTGAATCAC
ATCCAGAAGACAATGCGCTCACTGAATCGGGAGCGTACGCGTTGCTGCAA
GTGCAACATATCAATCAGGTCCGTGTATCGCACGACAGTGCACCACAACT
CGGACTCGTCAAGAGGTTTAGTAGGGAGTTACGGCGGTCAGGATCAAACA
GCAGCAGCCGCCAAAGTGGCAAAGAGCGCACTCGCAAGTCACTGTCATTT
ATCCGTAGGAGGCGCACCAACGAGAAGGAACGCGACGACGCCATGGCAAA
CTTGAGCCACACGGTGGGTGAGCAAAACCCTGCAACGCGAGGCTCGTTCT
TTTCCAGAAGTAGAAATCGGAGAAACAAGAAAGAAAAGAATCGTCACGAG
CCCGATGACGATGAAGACGATTTCGGAACTGGCGGTGCAAGGGATGGCTA
CGGAGACCTGGACGCCCCTAGTCCTGAAGAAGAAGGTGATTAA
back to top

protein sequence of Gvermi6620.t2

>Gvermi6620.t2 ID=Gvermi6620.t2|Name=Gvermi6620.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1781bp
MPAGIDVEKPSTRPRPPPYDPLLPSPPTHPTPMHQRQSSPNDKSNQLTVN
QTAVPMDTPHESPHDLFCLAKEYENRGRVSDAINLYLKAALNGHLSAMVS
YASHVISSDERAAFVWFQSAAVRGHPRAWVELGQLLARGRYFEVNAIDAA
RCWKRAAQMGDNTGKSALGLCYIRGFGVKQDSEKGLEIVRQVADVHNDVT
AMKNLAWIYRHGKGVTKNIQEAEYWENRAIKQQSIVDHLSSREKTLYGRG
RRAKSISSSHASEKSDAKSKPRTAPKPTVPSHPILEQEQIHDATDQSGEK
TTQEKKVRKPQPSRGSPQKVSSTGRESKQVRQQVSSSLPQGSNVQDQVKE
IERRHKAAMAEVESEIAASAYLFANKTPRRQQMPSSVPNTKIVHVATQTV
QVETKTIQDETGNIINRSTEKTFDRYSEDRAIRNGRDVLLTSAAHGSGNS
AKKAKGIEQPLAQEPYQVSISEAEIREVQQNALEKAANQERILFDDRAHG
KQSSEDTKTISHADNSEEIHPSVVHVDADQFADEPVDDSDEEPMHFGNEP
VEEGHHEKGEEEEEAEDEDEDDYEFVSGREEAKQEEEDEEEEDEEEEDEP
EKEEEEEDEQFITPDQSLHNASPSAQPLRVTEGVDATPTDAQEVITSIPS
PSHLNDVGDTSKASEDAALESIPFDQRVHSVAIGDPTTVRNVSNHTSPYT
HTGSTAQDTKDQKMSSEGPTTESSINPSTRYSEPKDYRETGKAGDFGHIR
ATYALGKEAHMNASQGEEDLMELEDEDMRNAADDHRKRENSFASGGTGGG
PVTEQAVPTISDLKEALGSYPRNPLRSDSQAPIFHLTSLLAVLPLRDMDA
YALLEKENAFAKVVVGMISQIEDEAIQEAGLLAIVRIVRTTQTGKKEELV
LSSYADCFRKVQGFSDAVIPSGTVGINVNGSGAIQAISQTMRRHSSTRHV
LLAGCAAFGEVASSSQKCREVAYEYDAVGLIVYSLRHRSSQASAIIHEAA
ARAASTMCTGKENIAYKEAFAKAGAVPELVSLLQLWGNNENASSDLHIAV
TRSICAAIRNLVEGCALASSQAIQSYAYHSLARALAFGRDNALLCSIIVI
ALTAITRNAATGAEKGLIDAKPLPEVLVAMQRHSRNPGFIRVSLDFMEAL
CNFNSMKAEIVQAGGIPFSADIIRQGGADNVLLEKACGVIEKLCFDSPEN
QESFAANKGIEGLSHLLSSHQTIPSVVEFALLALTAVCANSPQNQTEALK
NGCAEVLLRVLTSYSSKNAKVVAASCSAMQAMVVTKNATTAQAFGALQAA
ELIVRAMKRHTDSVAVQENGSAAVAAFCEADPNIISSLLKTGISSVLVVA
LQRFLHRQSAVIQIVRAMRAITNEVNEEDSYRFKSKLLTDRSNESSLAEI
FHTALSYHKKGLPGTANVIISICATINRLCMRSIAFKNEVGKDGIVEELT
RLVEKTAEFFEIKALQPVLATICTLVLDSEDNKNRFHAIGGVEAILDVMQ
KWKQDTYVLEHCCAALRYSCNDHFGNCDEVKIHNGVRSILGVMELYPENV
NVTLWCCLTLADLCKGDEELQSSPNVIQGIRKVISAMDMFSNNSRFLASA
CEFLRAASFENPGNQERVVRLGGRTAIVKALESHPEDNALTESGAYALLQ
VQHINQVRVSHDSAPQLGLVKRFSRELRRSGSNSSSRQSGKERTRKSLSF
IRRRRTNEKERDDAMANLSHTVGEQNPATRGSFFSRSRNRRNKKEKNRHE
PDDDEDDFGTGGARDGYGDLDAPSPEEEGD*
back to top

mRNA from alignment at ScGOVlb_88:1737458..1742800+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi6620.t2 ID=Gvermi6620.t2|Name=Gvermi6620.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=5343bp|location=Sequence derived from alignment at ScGOVlb_88:1737458..1742800+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCCAGCCGGAATCGACGTCGAGAAACCTTCCACGCGACCTCGGCCGCC TCCGTACGACCCCCTGCTGCCGTCCCCACCTACACACCCGACGCCCATGC ACCAGCGCCAGTCGAGTCCTAACGACAAGAGCAATCAGCTCACCGTCAAC CAAACCGCCGTCCCCATGGATACCCCGCACGAAAGCCCACACGATCTCTT CTGCCTTGCCAAAGAGTATGAGAATCGCGGCCGCGTGTCCGATGCCATCA ACCTGTACCTCAAGGCTGCGCTCAACGGTCACTTGTCCGCCATGGTGTCG TATGCATCGCACGTGATTTCTTCGGACGAGCGCGCCGCGTTCGTGTGGTT TCAGTCAGCCGCTGTGCGAGGGCACCCACGTGCGTGGGTTGAGCTCGGCC AGCTTTTGGCGCGAGGCCGATACTTTGAAGTCAATGCCATTGATGCTGCG CGTTGCTGGAAGCGCGCTGCCCAGATGGGCGACAACACCGGCAAAAGTGC GCTTGGTTTGTGTTACATTCGTGGCTTTGGGGTCAAACAGGACTCTGAGA AGGGTCTGGAAATCGTGCGTCAGGTTGCCGACGTTCACAATGATGTCACT GCCATGAAGAATCTCGCTTGGATTTACCGCCATGGCAAGGGCGTTACAAA AAACATACAGGAAGCCGAGTACTGGGAGAATCGTGCTATCAAACAGCAAA GTATTGTGGACCATTTATCTTCCAGGGAAAAGACGCTCTATGGACGTGGT CGTCGCGCAAAGTCCATATCCTCGTCTCACGCTTCTGAAAAGAGTGACGC CAAGAGCAAGCCTCGTACCGCGCCAAAACCCACAGTTCCAAGTCATCCTA TTCTCGAACAGGAACAAATTCATGATGCCACGGACCAGTCAGGCGAGAAA ACAACACAAGAAAAGAAAGTGCGAAAGCCACAACCTTCGCGAGGGTCTCC TCAAAAGGTGTCAAGCACGGGTAGGGAATCGAAGCAAGTCCGTCAACAAG TATCAAGCAGCCTCCCGCAGGGCTCAAATGTACAGGATCAGGTAAAGGAG ATTGAGAGAAGACATAAAGCCGCAATGGCAGAGGTGGAGAGCGAAATCGC GGCATCGGCCTATCTTTTCGCAAACAAGACACCTCGCCGACAGCAAATGC CCTCTTCTGTGCCGAACACAAAGATTGTACACGTCGCGACACAAACGGTT CAAGTCGAGACCAAAACTATTCAAGATGAAACTGGCAATATTATCAACCG TTCAACCGAGAAAACTTTTGACAGGTACAGCGAGGACAGAGCCATTCGAA ATGGTCGGGACGTTTTGCTCACATCTGCGGCACATGGCAGTGGAAATAGT GCGAAGAAGGCAAAGGGTATTGAGCAACCACTCGCTCAGGAACCGTATCA AGTGTCTATCAGTGAAGCCGAGATTCGAGAAGTACAGCAGAATGCACTCG AAAAGGCAGCCAATCAGGAGCGAATACTATTTGACGACCGAGCGCATGGC AAGCAATCGTCGGAAGACACCAAAACAATTAGTCATGCAGACAATAGTGA AGAAATACATCCTTCCGTTGTTCACGTAGACGCTGACCAGTTTGCGGACG AGCCTGTTGACGATTCTGACGAAGAGCCAATGCACTTTGGGAACGAACCC GTGGAAGAAGGTCACCACGAGAAGGGCgaagaggaagaagaagcagaaga cgaagacgaagacgactacgaattcgtaagtgggcgagaagaagcgaaac aagaagaggaagacgaagaagaggaagacgaagaagaggaagacgaaccg gaaaaggaagaggaagaggaggacgaacaaTTCATTACCCCGGACCAGAG TTTGCATAACGCTTCCCCCTCTGCACAACCGCTTCGTGTTACGGAAGGAG TGGATGCCACGCCCACAGATGCGCAGGAAGTCATTACTTCAATTCCTTCA CCCTCTCATCTTAACGACGTAGGAGATACGAGCAAGGCTTCTGAAGACGC GGCTCTAGAATCAATACCGTTCGACCAACGCGTTCACTCCGTTGCAATTG GTGATCCAACGACTGTCCGAAACGTATCCAACCATACATCTCCTTATACG CACACTGGTTCCACTGCACAAGACACGAAAGATCAGAAAATGTCCTCGGA GGGACCAACGACCGAATCGAGTATTAATCCTTCAACGAGATATTCCGAAC CTAAAGACTACAGGGAAACCGGCAAAGCCGGTGATTTTGGTCACATTCGG GCGACATACGCGCTGGGTAAAGAAGCACATATGAACGCCTCTCAAGGAGA GGAAGATCTGATGGAATTGGAAGATGAGGACATGAGAAACGCTGCGGACG ATCACCGAAAGCGTGAAAATTCTTTTGCTTCAGGAGGCACCGGAGGGGGC CCTGTCACAGAACAAGCTGTGCCAACTATATCAGATTTGAAGGAGGCTCT CGGCTCGTATCCTCGAAATCCACTACGCTCTGACTCGCAAGCTCCCATAT TTCATCTGACCAGCCTTTTGGCCGTACTTCCACTACGAGACATGGATGCT TACGCGCTCCTCGAAAAGGAGAATGCTTTCGCGAAAGTGGTGGTTGGCAT GATTTCTCAGATTGAAGACGAAGCAATTCAAGAAGCGGGCCTGCTTGCGA TTGTTCGAATTGTGCGAACTACGCAGACCGGGAAGAAAGAAGAATTGGTG CTGTCCTCATACGCCGACTGTTTCCGAAAAGTTCAAGGATTTTCTGACGC AGTCATCCCAAGCGGTACGGTTGGGATCAATGTAAATGGTTCCGGGGCAA TCCAAGCCATTTCGCAGACAATGCGTCGGCATTCGAGCACAAGACATGTT TTACTCGCTGGCTGCGCTGCGTTTGGTGAAGTCGCTAGTTCTTCGCAGAA ATGTCGAGAAGTTGCGTACGAATACGATGCGGTGGGGCTCATAGTGTACA GCCTTCGACATAGGAGCTCTCAGGCGTCTGCCATTATTCATGAAGCTGCT GCGAGGGCCGCATCTACCATGTGCACTGGCAAGGAAAACATAGCGTACAA GGAGGCCTTCGCGAAAGCTGGAGCTGTTCCGGAACTAGTAAGTCTTCTTC AATTATGGGGTAACAATGAGAATGCTTCATCTGATCTGCATATAGCTGTC ACAAGAAGCATATGCGCCGCTATTCGTAACTTGGTAGAAGGATGTGCGTT GGCAAGCTCTCAAGCTATACAATCTTATGCATATCACAGTTTGGCTCGTG CTTTGGCTTTCGGTCGAGATAATGCTTTGTTATGCTCGATTATAGTCATA GCATTAACCGCCATCACTCGGAACGCCGCTACTGGAGCCGAGAAGGGTCT AATTGATGCGAAGCCTTTGCCCGAAGTGCTCGTAGCCATGCAACGCCATT CGCGAAATCCAGGATTCATAAGGGTATCTTTAGATTTTATGGAAGCTCTA TGCAATTTTAACTCAATGAAAGCGGAGATTGTTCAGGCCGGAGGGATTCC GTTTTCAGCCGACATTATTAGACAAGGTGGAGCGGATAACGTCCTCCTTG AAAAAGCATGTGGTGTAATTGAAAAGTTGTGCTTCGATAGCCCGGAAAAT CAGGAATCATTCGCCGCTAACAAGGGAATCGAAGGACTTTCGCATCTACT CAGTTCCCACCAGACCATTCCATCTGTTGTGGAATTTGCCTTGCTTGCTC TGACTGCGGTTTGTGCAAACAGTCCCCAGAATCAAACGGAGGCTTTGAAG AACGGCTGTGCAGAAGTGTTACTACGAGTATTAACCTCTTACAGTTCGAA AAATGCAAAGGTTGTCGCTGCCTCATGTAGCGCTATGCAAGCAATGGTGG TCACCAAAAACGCAACCACGGCTCAGGCATTTGGTGCACTACAAGCAGCT GAGCTAATTGTTCGCGCAATGAAGAGACATACGGATAGTGTGGCAGTGCA GGAGAACGGAAGCGCTGCCGTAGCAGCGTTTTGCGAGGCGGACCCAAATA TCATTTCGTCACTGCTCAAAACCGGAATCTCGAGTGTTCTTGTGGTCGCC TTACAGAGGTTTCTACACAGACAATCTGCAGTCATCCAGATTGTTCGTGC GATGCGTGCAATTACAAACGAAGTGAATGAAGAAGATTCCTATAGATTCA AATCAAAGCTGTTGACGGATCGTTCAAATGAATCATCGCTTGCCGAGATT TTCCACACGGCGTTATCATACCACAAGAAAGGTTTACCAGGGACAGCAAA CGTGATCATCAGCATCTGTGCAACTATAAATCGGTTATGTATGCGGAGCA TCGCGTTCAAAAACGAAGTTGGAAAGGATGGCATTGTGGAAGAACTCACA CGGCTTGTGGAAAAAACAGCCGAGTTCTTTGAAATCAAGGCGTTGCAACC GGTCTTGGCAACAATTTGCACTTTGGTCCTGGATTCCGAAGACAATAAGA ACCGTTTCCACGCAATTGGTGGGGTGGAGGCTATTCTGGATGTTATGCAA AAATGGAAGCAAGACACTTATGTCTTAGAGCATTGTTGTGCTGCATTAAG GTACTCCTGCAACGATCATTTCGGAAACTGTGATGAGGTGAAAATCCACA ACGGCGTTCGAAGCATCCTTGGCGTCATGGAGCTATATCCAGAGAATGTG AATGTGACATTGTGGTGTTGTTTGACTCTAGCCGACTTGTGTAAGGGAGA TGAAGAACTGCAGTCCTCGCCTAACGTAATCCAGGGGATTCGAAAGGTTA TCAGTGCCATGGATATGTTCTCTAACAACAGTAGATTCCTTGCAAGTGCG TGCGAATTTTTGCGGGCTGCATCGTTCGAGAATCCCGGAAATCAGGAAAG GGTTGTTCGGCTGGGTGGGCGCACGGCAATTGTGAAAGCACTTGAATCAC ATCCAGAAGACAATGCGCTCACTGAATCGGGAGCGTACGCGTTGCTGCAA GTGCAACATATCAATCAGGTCCGTGTATCGCACGACAGTGCACCACAACT CGGACTCGTCAAGAGGTTTAGTAGGGAGTTACGGCGGTCAGGATCAAACA GCAGCAGCCGCCAAAGTGGCAAAGAGCGCACTCGCAAGTCACTGTCATTT ATCCGTAGGAGGCGCACCAACGAGAAGGAACGCGACGACGCCATGGCAAA CTTGAGCCACACGGTGGGTGAGCAAAACCCTGCAACGCGAGGCTCGTTCT TTTCCAGAAGTAGAAATCGGAGAAACAAGAAAGAAAAGAATCGTCACGAG CCCGATGACGATGAAGACGATTTCGGAACTGGCGGTGCAAGGGATGGCTA CGGAGACCTGGACGCCCCTAGTCCTGAAGAAGAAGGTGATTAA
back to top

Coding sequence (CDS) from alignment at ScGOVlb_88:1737458..1742800+

>Gvermi6620.t2 ID=Gvermi6620.t2|Name=Gvermi6620.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=5343bp|location=Sequence derived from alignment at ScGOVlb_88:1737458..1742800+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCCAGCCGGAATCGACGTCGAGAAACCTTCCACGCGACCTCGGCCGCC
TCCGTACGACCCCCTGCTGCCGTCCCCACCTACACACCCGACGCCCATGC
ACCAGCGCCAGTCGAGTCCTAACGACAAGAGCAATCAGCTCACCGTCAAC
CAAACCGCCGTCCCCATGGATACCCCGCACGAAAGCCCACACGATCTCTT
CTGCCTTGCCAAAGAGTATGAGAATCGCGGCCGCGTGTCCGATGCCATCA
ACCTGTACCTCAAGGCTGCGCTCAACGGTCACTTGTCCGCCATGGTGTCG
TATGCATCGCACGTGATTTCTTCGGACGAGCGCGCCGCGTTCGTGTGGTT
TCAGTCAGCCGCTGTGCGAGGGCACCCACGTGCGTGGGTTGAGCTCGGCC
AGCTTTTGGCGCGAGGCCGATACTTTGAAGTCAATGCCATTGATGCTGCG
CGTTGCTGGAAGCGCGCTGCCCAGATGGGCGACAACACCGGCAAAAGTGC
GCTTGGTTTGTGTTACATTCGTGGCTTTGGGGTCAAACAGGACTCTGAGA
AGGGTCTGGAAATCGTGCGTCAGGTTGCCGACGTTCACAATGATGTCACT
GCCATGAAGAATCTCGCTTGGATTTACCGCCATGGCAAGGGCGTTACAAA
AAACATACAGGAAGCCGAGTACTGGGAGAATCGTGCTATCAAACAGCAAA
GTATTGTGGACCATTTATCTTCCAGGGAAAAGACGCTCTATGGACGTGGT
CGTCGCGCAAAGTCCATATCCTCGTCTCACGCTTCTGAAAAGAGTGACGC
CAAGAGCAAGCCTCGTACCGCGCCAAAACCCACAGTTCCAAGTCATCCTA
TTCTCGAACAGGAACAAATTCATGATGCCACGGACCAGTCAGGCGAGAAA
ACAACACAAGAAAAGAAAGTGCGAAAGCCACAACCTTCGCGAGGGTCTCC
TCAAAAGGTGTCAAGCACGGGTAGGGAATCGAAGCAAGTCCGTCAACAAG
TATCAAGCAGCCTCCCGCAGGGCTCAAATGTACAGGATCAGGTAAAGGAG
ATTGAGAGAAGACATAAAGCCGCAATGGCAGAGGTGGAGAGCGAAATCGC
GGCATCGGCCTATCTTTTCGCAAACAAGACACCTCGCCGACAGCAAATGC
CCTCTTCTGTGCCGAACACAAAGATTGTACACGTCGCGACACAAACGGTT
CAAGTCGAGACCAAAACTATTCAAGATGAAACTGGCAATATTATCAACCG
TTCAACCGAGAAAACTTTTGACAGGTACAGCGAGGACAGAGCCATTCGAA
ATGGTCGGGACGTTTTGCTCACATCTGCGGCACATGGCAGTGGAAATAGT
GCGAAGAAGGCAAAGGGTATTGAGCAACCACTCGCTCAGGAACCGTATCA
AGTGTCTATCAGTGAAGCCGAGATTCGAGAAGTACAGCAGAATGCACTCG
AAAAGGCAGCCAATCAGGAGCGAATACTATTTGACGACCGAGCGCATGGC
AAGCAATCGTCGGAAGACACCAAAACAATTAGTCATGCAGACAATAGTGA
AGAAATACATCCTTCCGTTGTTCACGTAGACGCTGACCAGTTTGCGGACG
AGCCTGTTGACGATTCTGACGAAGAGCCAATGCACTTTGGGAACGAACCC
GTGGAAGAAGGTCACCACGAGAAGGGCgaagaggaagaagaagcagaaga
cgaagacgaagacgactacgaattcgtaagtgggcgagaagaagcgaaac
aagaagaggaagacgaagaagaggaagacgaagaagaggaagacgaaccg
gaaaaggaagaggaagaggaggacgaacaaTTCATTACCCCGGACCAGAG
TTTGCATAACGCTTCCCCCTCTGCACAACCGCTTCGTGTTACGGAAGGAG
TGGATGCCACGCCCACAGATGCGCAGGAAGTCATTACTTCAATTCCTTCA
CCCTCTCATCTTAACGACGTAGGAGATACGAGCAAGGCTTCTGAAGACGC
GGCTCTAGAATCAATACCGTTCGACCAACGCGTTCACTCCGTTGCAATTG
GTGATCCAACGACTGTCCGAAACGTATCCAACCATACATCTCCTTATACG
CACACTGGTTCCACTGCACAAGACACGAAAGATCAGAAAATGTCCTCGGA
GGGACCAACGACCGAATCGAGTATTAATCCTTCAACGAGATATTCCGAAC
CTAAAGACTACAGGGAAACCGGCAAAGCCGGTGATTTTGGTCACATTCGG
GCGACATACGCGCTGGGTAAAGAAGCACATATGAACGCCTCTCAAGGAGA
GGAAGATCTGATGGAATTGGAAGATGAGGACATGAGAAACGCTGCGGACG
ATCACCGAAAGCGTGAAAATTCTTTTGCTTCAGGAGGCACCGGAGGGGGC
CCTGTCACAGAACAAGCTGTGCCAACTATATCAGATTTGAAGGAGGCTCT
CGGCTCGTATCCTCGAAATCCACTACGCTCTGACTCGCAAGCTCCCATAT
TTCATCTGACCAGCCTTTTGGCCGTACTTCCACTACGAGACATGGATGCT
TACGCGCTCCTCGAAAAGGAGAATGCTTTCGCGAAAGTGGTGGTTGGCAT
GATTTCTCAGATTGAAGACGAAGCAATTCAAGAAGCGGGCCTGCTTGCGA
TTGTTCGAATTGTGCGAACTACGCAGACCGGGAAGAAAGAAGAATTGGTG
CTGTCCTCATACGCCGACTGTTTCCGAAAAGTTCAAGGATTTTCTGACGC
AGTCATCCCAAGCGGTACGGTTGGGATCAATGTAAATGGTTCCGGGGCAA
TCCAAGCCATTTCGCAGACAATGCGTCGGCATTCGAGCACAAGACATGTT
TTACTCGCTGGCTGCGCTGCGTTTGGTGAAGTCGCTAGTTCTTCGCAGAA
ATGTCGAGAAGTTGCGTACGAATACGATGCGGTGGGGCTCATAGTGTACA
GCCTTCGACATAGGAGCTCTCAGGCGTCTGCCATTATTCATGAAGCTGCT
GCGAGGGCCGCATCTACCATGTGCACTGGCAAGGAAAACATAGCGTACAA
GGAGGCCTTCGCGAAAGCTGGAGCTGTTCCGGAACTAGTAAGTCTTCTTC
AATTATGGGGTAACAATGAGAATGCTTCATCTGATCTGCATATAGCTGTC
ACAAGAAGCATATGCGCCGCTATTCGTAACTTGGTAGAAGGATGTGCGTT
GGCAAGCTCTCAAGCTATACAATCTTATGCATATCACAGTTTGGCTCGTG
CTTTGGCTTTCGGTCGAGATAATGCTTTGTTATGCTCGATTATAGTCATA
GCATTAACCGCCATCACTCGGAACGCCGCTACTGGAGCCGAGAAGGGTCT
AATTGATGCGAAGCCTTTGCCCGAAGTGCTCGTAGCCATGCAACGCCATT
CGCGAAATCCAGGATTCATAAGGGTATCTTTAGATTTTATGGAAGCTCTA
TGCAATTTTAACTCAATGAAAGCGGAGATTGTTCAGGCCGGAGGGATTCC
GTTTTCAGCCGACATTATTAGACAAGGTGGAGCGGATAACGTCCTCCTTG
AAAAAGCATGTGGTGTAATTGAAAAGTTGTGCTTCGATAGCCCGGAAAAT
CAGGAATCATTCGCCGCTAACAAGGGAATCGAAGGACTTTCGCATCTACT
CAGTTCCCACCAGACCATTCCATCTGTTGTGGAATTTGCCTTGCTTGCTC
TGACTGCGGTTTGTGCAAACAGTCCCCAGAATCAAACGGAGGCTTTGAAG
AACGGCTGTGCAGAAGTGTTACTACGAGTATTAACCTCTTACAGTTCGAA
AAATGCAAAGGTTGTCGCTGCCTCATGTAGCGCTATGCAAGCAATGGTGG
TCACCAAAAACGCAACCACGGCTCAGGCATTTGGTGCACTACAAGCAGCT
GAGCTAATTGTTCGCGCAATGAAGAGACATACGGATAGTGTGGCAGTGCA
GGAGAACGGAAGCGCTGCCGTAGCAGCGTTTTGCGAGGCGGACCCAAATA
TCATTTCGTCACTGCTCAAAACCGGAATCTCGAGTGTTCTTGTGGTCGCC
TTACAGAGGTTTCTACACAGACAATCTGCAGTCATCCAGATTGTTCGTGC
GATGCGTGCAATTACAAACGAAGTGAATGAAGAAGATTCCTATAGATTCA
AATCAAAGCTGTTGACGGATCGTTCAAATGAATCATCGCTTGCCGAGATT
TTCCACACGGCGTTATCATACCACAAGAAAGGTTTACCAGGGACAGCAAA
CGTGATCATCAGCATCTGTGCAACTATAAATCGGTTATGTATGCGGAGCA
TCGCGTTCAAAAACGAAGTTGGAAAGGATGGCATTGTGGAAGAACTCACA
CGGCTTGTGGAAAAAACAGCCGAGTTCTTTGAAATCAAGGCGTTGCAACC
GGTCTTGGCAACAATTTGCACTTTGGTCCTGGATTCCGAAGACAATAAGA
ACCGTTTCCACGCAATTGGTGGGGTGGAGGCTATTCTGGATGTTATGCAA
AAATGGAAGCAAGACACTTATGTCTTAGAGCATTGTTGTGCTGCATTAAG
GTACTCCTGCAACGATCATTTCGGAAACTGTGATGAGGTGAAAATCCACA
ACGGCGTTCGAAGCATCCTTGGCGTCATGGAGCTATATCCAGAGAATGTG
AATGTGACATTGTGGTGTTGTTTGACTCTAGCCGACTTGTGTAAGGGAGA
TGAAGAACTGCAGTCCTCGCCTAACGTAATCCAGGGGATTCGAAAGGTTA
TCAGTGCCATGGATATGTTCTCTAACAACAGTAGATTCCTTGCAAGTGCG
TGCGAATTTTTGCGGGCTGCATCGTTCGAGAATCCCGGAAATCAGGAAAG
GGTTGTTCGGCTGGGTGGGCGCACGGCAATTGTGAAAGCACTTGAATCAC
ATCCAGAAGACAATGCGCTCACTGAATCGGGAGCGTACGCGTTGCTGCAA
GTGCAACATATCAATCAGGTCCGTGTATCGCACGACAGTGCACCACAACT
CGGACTCGTCAAGAGGTTTAGTAGGGAGTTACGGCGGTCAGGATCAAACA
GCAGCAGCCGCCAAAGTGGCAAAGAGCGCACTCGCAAGTCACTGTCATTT
ATCCGTAGGAGGCGCACCAACGAGAAGGAACGCGACGACGCCATGGCAAA
CTTGAGCCACACGGTGGGTGAGCAAAACCCTGCAACGCGAGGCTCGTTCT
TTTCCAGAAGTAGAAATCGGAGAAACAAGAAAGAAAAGAATCGTCACGAG
CCCGATGACGATGAAGACGATTTCGGAACTGGCGGTGCAAGGGATGGCTA
CGGAGACCTGGACGCCCCTAGTCCTGAAGAAGAAGGTGATTAA
back to top