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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005707295.1 |
| Preferred name | TK |
| PFAMs | Transket_pyr,Transketolase_C,Transketolase_N |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00032,RC00226,RC00571,RC01560 |
| KEGG ko | ko:K00615,ko:K01662 |
| KEGG Reaction | R01067,R01641,R01830,R05636,R06590 |
| KEGG Pathway | ko00030,ko00710,ko00730,ko00900,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map00730,map00900,map01051,map01100,map01110,map01120,map01130,map01200,map01230 |
| KEGG Module | M00004,M00007,M00096,M00165,M00167 |
| GOs | GO:0003674,GO:0003824,GO:0004802,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006970,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009651,GO:0009941,GO:0010035,GO:0010038,GO:0016020,GO:0016740,GO:0016744,GO:0030145,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042221,GO:0042651,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0055035 |
| Evalue | 9.52e-245 |
| EggNOG OGs | COG0021@1|root,KOG0523@2759|Eukaryota |
| EC | 2.2.1.1,2.2.1.7 |
| Description | transketolase activity |
| COG category | G |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi6564.t1 ID=Gvermi6564.t1|Name=Gvermi6564.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=738bp MTRPALKFIANNDEHDGDYQQRLPHHTPETSMISLSPLESSVRGSSSVSS DEEIIPDKSKLSNYSTPEQVALANLCINSVRFLCVDAINHANSGHPGVCM GMASAAFVLFDNHMKFNPTNPKWLNRDRFILSAGHGSMLLYSLLHLYGYE SVSLDDIKQFRKLNSTTPGHPECTETAGVEVCTGPLGQGISNAVGIAIAE AHVAAVYNRPGFPVVDNYTFCIAGDGCLMEGISAEACSLAGHLKLGKLIV LYDDNNISIDGSTDIAFTENVGKRFEAYGWQVLHVQKGTTDIMAIDRAIL AAKRCTDRPTLIKISTIIGYGGPNIQSTAKAHGAPLRGDETAAARKALKY EYEPFNIPAPALEHLRRKVELGNSQEASWRATVEEYSCVYPELHEQFQKH IVIGQVAKTVSTALRKTALSLGTKTQATRKHSKALLNAIAPLVPNLIGGS ADTSASTLTDLECSEDFTYERRTGRNIRYGVREHAMGAISNGIGLAGYNL LPFCSTFFVFTDYMRAAMRMASLSRTGTLFVMTHDSIGLGEDGPSHQPIE HLASFRAMPNHNVWRPADGVETAAAYASALATRDCPSTVVLTRQSTEALA HTDFDAAQKGGYVVYKTANGRTDGVLIATGSEVSVAVRAAQKLERDGMGV RVVSLPCWEVFARQGRRYRRTVINAEREMCVAVEAGSRFGWERYADWFVC VDDFGRSGAGAAVMRQLGVAEERVVARFAEMAASRAA* back to topspliced messenger RNA >Gvermi6564.t1 ID=Gvermi6564.t1|Name=Gvermi6564.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2214bp|location=Sequence derived from alignment at ScGOVlb_88:1355043..1357330- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACACGTCCTGCTTTAAAGTTTATTGCGAACAATGATGAACATGATGG CGATTATCAGCAACGACTGCCACATCATACCCCGGAGACATCCATGATAT CTTTATCTCCGTTGGAAAGTTCTGTCCGAGGTTCGTCATCAGTCTCTTCG GACGAAGAAATTATCCCGGACAAATCGAAGTTGTCCAACTACTCAACGCC GGAGCAGGTTGCCTTGGCGAATCTGTGCATAAACTCTGTGCGGTTCTTAT GTGTTGATGCAATTAATCATGCAAACAGCGGCCACCCAGGCGTGTGCATG GGTATGGCATCAGCGGCTTTTGTGCTCTTTGACAACCACATGAAGTTTAA TCCAACAAACCCGAAGTGGCTCAACAGAGACAGGTTTATTTTGTCAGCAG GGCATGGCTCTATGCTCTTGTACTCCCTTCTGCATCTGTACGGATATGAG TCCGTTTCACTCGATGATATTAAACAATTCCGGAAGCTCAATTCGACCAC TCCGGGGCATCCTGAATGTACTGAAACGGCCGGGGTTGAAGTTTGCACAG GGCCCCTCGGGCAGGGTATCTCCAACGCAGTAGGAATTGCCATCGCCGAA GCGCATGTGGCGGCTGTGTACAACCGACCCGGGTTCCCCGTGGTCGACAA TTACACCTTTTGCATAGCAGGGGATGGATGCTTAATGGAAGGGATTTCAG CCGAAGCTTGTTCGCTGGCGGGCCATCTCAAACTCGGGAAACTCATTGTA CTCTATGACGATAACAACATTTCCATCGACGGTTCTACCGATATTGCGTT CACGGAAAACGTGGGAAAGCGGTTTGAAGCGTATGGGTGGCAAGTGCTAC ACGTGCAAAAAGGAACTACTGACATAATGGCCATTGACAGAGCAATTTTG GCAGCGAAAAGATGTACAGACAGACCAACTCTCATCAAGATAAGCACTAT CATCGGATACGGTGGCCCAAATATTCAGAGCACGGCAAAGGCGCACGGGG CTCCCCTAAGGGGCGATGAAACGGCAGCGGCTCGGAAGGCGCTCAAATAT GAGTACGAGCCTTTCAATATCCCAGCTCCAGCGTTGGAGCACCTTCGAAG GAAGGTGGAGCTTGGCAACAGCCAAGAAGCATCGTGGAGAGCAACGGTTG AAGAGTACAGCTGTGTGTACCCCGAGCTGCACGAGCAGTTTCAAAAGCAT ATCGTGATCGGTCAAGTTGCGAAAACAGTAAGCACTGCGTTGCGTAAGAC GGCTCTCTCTCTTGGAACAAAGACGCAGGCGACTCGAAAGCATTCGAAAG CACTGCTAAACGCTATCGCACCTCTGGTGCCAAACCTGATTGGAGGCAGT GCGGATACTAGCGCGTCAACGTTGACAGACCTGGAGTGCAGCGAAGACTT CACATATGAAAGGCGGACAGGGAGGAACATTCGGTACGGCGTTCGCGAGC ACGCAATGGGCGCGATCAGCAATGGCATCGGGCTGGCAGGGTACAACCTG CTGCCGTTTTGCTCGACGTTCTTCGTATTCACAGACTACATGCGAGCGGC GATGCGAATGGCGTCGCTGAGCCGCACTGGAACGCTGTTTGTGATGACGC ATGACTCGATCGGGCTCGGGGAGGACGGACCGTCGCACCAGCCCATCGAG CACCTCGCGTCGTTCCGGGCCATGCCGAACCACAACGTGTGGCGCCCAGC GGACGGGGTGGAAACGGCGGCGGCGTACGCGAGCGCGCTGGCGACGCGGG ATTGCCCGTCGACGGTAGTTCTGACGAGGCAGTCGACGGAGGCGCTGGCG CACACGGACTTTGACGCGGCGCAGAAGGGGGGCTACGTGGTGTACAAGAC GGCGAACGGGCGAACGGATGGGGTGCTGATCGCCACCGGCAGCGAAGTGA GCGTGGCGGTGCGCGCGGCGCAGAAACTGGAGCGGGACGGGATGGGCGTG CGCGTGGTGTCGCTGCCGTGCTGGGAGGTGTTCGCGCGGCAGGGGCGGCG CTACCGGCGGACGGTGATCAATGCGGAGCGCGAGATGTGCGTGGCGGTGG AGGCGGGCAGCCGGTTCGGCTGGGAGCGGTACGCCGACTGGTTCGTGTGC GTGGACGACTTTGGCAGGAGCGGCGCGGGCGCGGCCGTGATGCGCCAACT GGGCGTCGCCGAGGAGCGCGTCGTTGCGCGCTTCGCGGAGATGGCGGCCA GCCGCGCGGCGTGA back to topprotein sequence of Gvermi6564.t1 >Gvermi6564.t1 ID=Gvermi6564.t1|Name=Gvermi6564.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=738bp
MTRPALKFIANNDEHDGDYQQRLPHHTPETSMISLSPLESSVRGSSSVSS DEEIIPDKSKLSNYSTPEQVALANLCINSVRFLCVDAINHANSGHPGVCM GMASAAFVLFDNHMKFNPTNPKWLNRDRFILSAGHGSMLLYSLLHLYGYE SVSLDDIKQFRKLNSTTPGHPECTETAGVEVCTGPLGQGISNAVGIAIAE AHVAAVYNRPGFPVVDNYTFCIAGDGCLMEGISAEACSLAGHLKLGKLIV LYDDNNISIDGSTDIAFTENVGKRFEAYGWQVLHVQKGTTDIMAIDRAIL AAKRCTDRPTLIKISTIIGYGGPNIQSTAKAHGAPLRGDETAAARKALKY EYEPFNIPAPALEHLRRKVELGNSQEASWRATVEEYSCVYPELHEQFQKH IVIGQVAKTVSTALRKTALSLGTKTQATRKHSKALLNAIAPLVPNLIGGS ADTSASTLTDLECSEDFTYERRTGRNIRYGVREHAMGAISNGIGLAGYNL LPFCSTFFVFTDYMRAAMRMASLSRTGTLFVMTHDSIGLGEDGPSHQPIE HLASFRAMPNHNVWRPADGVETAAAYASALATRDCPSTVVLTRQSTEALA HTDFDAAQKGGYVVYKTANGRTDGVLIATGSEVSVAVRAAQKLERDGMGV RVVSLPCWEVFARQGRRYRRTVINAEREMCVAVEAGSRFGWERYADWFVC VDDFGRSGAGAAVMRQLGVAEERVVARFAEMAASRAA* back to topmRNA from alignment at ScGOVlb_88:1355043..1357330- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi6564.t1 ID=Gvermi6564.t1|Name=Gvermi6564.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2288bp|location=Sequence derived from alignment at ScGOVlb_88:1355043..1357330- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGACACGTCCTGCTTTAAAGTTTATTGCGAACAATGATGAACATGATGG
CGATTATCAGCAACGACTGCCACATCATACCCCGGAGACATCCATGATAT
CTTTATCTCCGTTGGAAAGTTCTGTCCGAGGTTCGTCATCAGTCTCTTCG
GACGAAGAAATTATCCCGGACAAATCGAAGTTGTCCAACTACTCAACGCC
GGAGCAGGTTGCCTTGGCGAATCTGTGCATAAACTCTGTGCGGTTCTTAT
GTGTTGATGCAATTAATCATGCAAACAGCGGCCACCCAGGCGTGTGCATG
GGTATGGCATCAGCGGCTTTTGTGCTCTTTGACAACCACATGAAGTTTAA
TCCAACAAACCCGAAGTGGCTCAACAGAGACAGGTTTATTTTGTCAGCAG
GGCATGGCTCTATGCTCTTGTACTCCCTTCTGCATCTGTACGGATATGAG
TCCGTTTCACTCGATGATATTAAACAATTCCGGAAGCTCAATTCGACCAC
TCCGGGGCATCCTGAATGTACTGAAACGGCCGGGGTTGAAGTTTGCACAG
GGCCCCTCGGGCAGGGTATCTCCAACGCAGTAGGAATTGCCATCGCCGAA
GCGCATGTGGCGGCTGTGTACAACCGACCCGGGTTCCCCGTGGTCGACAA
TTACACCTTTTGCATAGCAGGGGATGGATGCTTAATGGAAGGGATTTCAG
CCGAAGCTTGTTCGCTGGCGGGCCATCTCAAACTCGGGAAACTCATTGTA
CTCTATGACGATAACAACATTTCCATCGACGGTTCTACCGATATTGCGTT
CACGGAAAACGTGGGAAAGCGGTTTGAAGCGTATGGGTGGCAAGTGCTAC
ACGTGCAAAAAGGAACTACTGACATAATGGCCATTGACAGAGCAATTTTG
GCAGCGAAAAGATGTACAGACAGACCAACTCTCATCAAGATAAGCACTAT
CATCGGATACGGTGGCCCAAATATTCAGAGCACGGCAAAGGCGCACGGGG
CTCCCCTAAGGGGCGATGAAACGGCAGCGGCTCGGAAGGCGCTCAAATAT
GAGTACGAGCCTTTCAATATCCCAGCTCCAGCGTTGGAGCACCTTCGAAG
GAAGGTGGAGCTTGGCAACAGCCAAGAAGCATCGTGGAGAGCAACGGTTG
AAGAGTACAGCTGTGTGTACCCCGAGCTGCACGAGCAGTTTCAAAAGCAT
ATCGTGATCGGTCAAGTTGCGAAAACAGTAAGCACTGCGTTGCGTAAGAC
GGCTCTCTCTCTTGGAACAAAGACGCAGGCGACTCGAAAGCATTCGAAAG
CACTGCTAAACGCTATCGCACCTCTGGTGCCAAACCTGATTGGAGGCAGT
GCGGATACTAGCGCGTCAACGTTGACAGACCTGGAGTGCAGCGAAGACTT
CACATATGAAAGGCGGACAGGGAGGAACATTCGGTACGGCGTTCGCGAGC
ACGCAATGGGCGCGATCAGCAATGGCATCGGGCTGGCAGGGTACAACCTG
CTGCCGTTTTGCTCGACGTTCTTCGTATTCACAGGTACGTGGGTACATGC
ACGATGATTGCTCCGTAGCGGTGCGCGACAGAAAGTTGTTTCTAACGTGA
GCGCGTAGACTACATGCGAGCGGCGATGCGAATGGCGTCGCTGAGCCGCA
CTGGAACGCTGTTTGTGATGACGCATGACTCGATCGGGCTCGGGGAGGAC
GGACCGTCGCACCAGCCCATCGAGCACCTCGCGTCGTTCCGGGCCATGCC
GAACCACAACGTGTGGCGCCCAGCGGACGGGGTGGAAACGGCGGCGGCGT
ACGCGAGCGCGCTGGCGACGCGGGATTGCCCGTCGACGGTAGTTCTGACG
AGGCAGTCGACGGAGGCGCTGGCGCACACGGACTTTGACGCGGCGCAGAA
GGGGGGCTACGTGGTGTACAAGACGGCGAACGGGCGAACGGATGGGGTGC
TGATCGCCACCGGCAGCGAAGTGAGCGTGGCGGTGCGCGCGGCGCAGAAA
CTGGAGCGGGACGGGATGGGCGTGCGCGTGGTGTCGCTGCCGTGCTGGGA
GGTGTTCGCGCGGCAGGGGCGGCGCTACCGGCGGACGGTGATCAATGCGG
AGCGCGAGATGTGCGTGGCGGTGGAGGCGGGCAGCCGGTTCGGCTGGGAG
CGGTACGCCGACTGGTTCGTGTGCGTGGACGACTTTGGCAGGAGCGGCGC
GGGCGCGGCCGTGATGCGCCAACTGGGCGTCGCCGAGGAGCGCGTCGTTG
CGCGCTTCGCGGAGATGGCGGCCAGCCGCGCGGCGTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_88:1355043..1357330- >Gvermi6564.t1 ID=Gvermi6564.t1|Name=Gvermi6564.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2214bp|location=Sequence derived from alignment at ScGOVlb_88:1355043..1357330- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGACACGTCCTGCTTTAAAGTTTATTGCGAACAATGATGAACATGATGG CGATTATCAGCAACGACTGCCACATCATACCCCGGAGACATCCATGATAT CTTTATCTCCGTTGGAAAGTTCTGTCCGAGGTTCGTCATCAGTCTCTTCG GACGAAGAAATTATCCCGGACAAATCGAAGTTGTCCAACTACTCAACGCC GGAGCAGGTTGCCTTGGCGAATCTGTGCATAAACTCTGTGCGGTTCTTAT GTGTTGATGCAATTAATCATGCAAACAGCGGCCACCCAGGCGTGTGCATG GGTATGGCATCAGCGGCTTTTGTGCTCTTTGACAACCACATGAAGTTTAA TCCAACAAACCCGAAGTGGCTCAACAGAGACAGGTTTATTTTGTCAGCAG GGCATGGCTCTATGCTCTTGTACTCCCTTCTGCATCTGTACGGATATGAG TCCGTTTCACTCGATGATATTAAACAATTCCGGAAGCTCAATTCGACCAC TCCGGGGCATCCTGAATGTACTGAAACGGCCGGGGTTGAAGTTTGCACAG GGCCCCTCGGGCAGGGTATCTCCAACGCAGTAGGAATTGCCATCGCCGAA GCGCATGTGGCGGCTGTGTACAACCGACCCGGGTTCCCCGTGGTCGACAA TTACACCTTTTGCATAGCAGGGGATGGATGCTTAATGGAAGGGATTTCAG CCGAAGCTTGTTCGCTGGCGGGCCATCTCAAACTCGGGAAACTCATTGTA CTCTATGACGATAACAACATTTCCATCGACGGTTCTACCGATATTGCGTT CACGGAAAACGTGGGAAAGCGGTTTGAAGCGTATGGGTGGCAAGTGCTAC ACGTGCAAAAAGGAACTACTGACATAATGGCCATTGACAGAGCAATTTTG GCAGCGAAAAGATGTACAGACAGACCAACTCTCATCAAGATAAGCACTAT CATCGGATACGGTGGCCCAAATATTCAGAGCACGGCAAAGGCGCACGGGG CTCCCCTAAGGGGCGATGAAACGGCAGCGGCTCGGAAGGCGCTCAAATAT GAGTACGAGCCTTTCAATATCCCAGCTCCAGCGTTGGAGCACCTTCGAAG GAAGGTGGAGCTTGGCAACAGCCAAGAAGCATCGTGGAGAGCAACGGTTG AAGAGTACAGCTGTGTGTACCCCGAGCTGCACGAGCAGTTTCAAAAGCAT ATCGTGATCGGTCAAGTTGCGAAAACAGTAAGCACTGCGTTGCGTAAGAC GGCTCTCTCTCTTGGAACAAAGACGCAGGCGACTCGAAAGCATTCGAAAG CACTGCTAAACGCTATCGCACCTCTGGTGCCAAACCTGATTGGAGGCAGT GCGGATACTAGCGCGTCAACGTTGACAGACCTGGAGTGCAGCGAAGACTT CACATATGAAAGGCGGACAGGGAGGAACATTCGGTACGGCGTTCGCGAGC ACGCAATGGGCGCGATCAGCAATGGCATCGGGCTGGCAGGGTACAACCTG CTGCCGTTTTGCTCGACGTTCTTCGTATTCACAGACTACATGCGAGCGGC GATGCGAATGGCGTCGCTGAGCCGCACTGGAACGCTGTTTGTGATGACGC ATGACTCGATCGGGCTCGGGGAGGACGGACCGTCGCACCAGCCCATCGAG CACCTCGCGTCGTTCCGGGCCATGCCGAACCACAACGTGTGGCGCCCAGC GGACGGGGTGGAAACGGCGGCGGCGTACGCGAGCGCGCTGGCGACGCGGG ATTGCCCGTCGACGGTAGTTCTGACGAGGCAGTCGACGGAGGCGCTGGCG CACACGGACTTTGACGCGGCGCAGAAGGGGGGCTACGTGGTGTACAAGAC GGCGAACGGGCGAACGGATGGGGTGCTGATCGCCACCGGCAGCGAAGTGA GCGTGGCGGTGCGCGCGGCGCAGAAACTGGAGCGGGACGGGATGGGCGTG CGCGTGGTGTCGCTGCCGTGCTGGGAGGTGTTCGCGCGGCAGGGGCGGCG CTACCGGCGGACGGTGATCAATGCGGAGCGCGAGATGTGCGTGGCGGTGG AGGCGGGCAGCCGGTTCGGCTGGGAGCGGTACGCCGACTGGTTCGTGTGC GTGGACGACTTTGGCAGGAGCGGCGCGGGCGCGGCCGTGATGCGCCAACT GGGCGTCGCCGAGGAGCGCGTCGTTGCGCGCTTCGCGGAGATGGCGGCCA GCCGCGCGGCGTGA back to top
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