Gvermi3553.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi3553.t1
Unique NameGvermi3553.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length1259
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_41contigScGOVlb_41:3268690..3277512 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi3553Gvermi3553Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_41 3268690..3277512 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3553.t1Gvermi3553.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_41 3268690..3277512 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3553.t1.start1Gvermi3553.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_41 3268690..3268692 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3553.t1.CDS1Gvermi3553.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_41 3268690..3269830 +
Gvermi3553.t1.CDS2Gvermi3553.t1.CDS2Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_41 3273754..3275106 +
Gvermi3553.t1.CDS3Gvermi3553.t1.CDS3Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_41 3276166..3276516 +
Gvermi3553.t1.CDS4Gvermi3553.t1.CDS4Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_41 3276581..3277512 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3553.t1.exon1Gvermi3553.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_41 3268690..3269830 +
Gvermi3553.t1.exon2Gvermi3553.t1.exon2Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_41 3273754..3275106 +
Gvermi3553.t1.exon3Gvermi3553.t1.exon3Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_41 3276166..3276516 +
Gvermi3553.t1.exon4Gvermi3553.t1.exon4Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_41 3276581..3277512 +


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3553.t1.intron1Gvermi3553.t1.intron1Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_41 3269831..3273753 +
Gvermi3553.t1.intron2Gvermi3553.t1.intron2Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_41 3275107..3276165 +
Gvermi3553.t1.intron3Gvermi3553.t1.intron3Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_41 3276517..3276580 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi3553.t1.stop1Gvermi3553.t1.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_41 3277510..3277512 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi3553.t1 ID=Gvermi3553.t1|Name=Gvermi3553.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1259bp
MRTLENVLIELHNDLRNPVQYPHSRAQGREAPATVPTNHAAQTSHDNTTN
GPEAIAHEINALKRGVAALRAENNQLLRAVNRNNNTLSRREPPLSTPSSD
NNLPSPNEDAQQMAPAVRHNPDQEPPRPNATQRKTWAQIAADPGPVLQNL
EPTTRDRIHQACEALKQAELAPTPPWLRNTRLTALYFLGMKKGPISQYWK
AFAHAIPLRTLYNISFIGRGITEIIVHESHANRLTVTLRALGYRPLEDMD
PIMDPRFQEASLNTEDNIHRNASACLTRYRRQQDSSHPVAEKWYMEASQR
LQARFPAVFTEEGRAMDHQIRTAQLQRRSHPTNTPHTETQSQDPDYEPSL
TNTDATSAADPTDVPTAQTPDGFTIIARKPPEEENAVPNHALPRPDVNRT
LQFPTPAPTTRRLPQPSPTTDREPPHAGSAVNGHVAQEDLEMEDNPSPYD
TAGRGENQVVVASHELEDRFQKVAMDLACHSCKVTRQLQLEVDWSDPEIR
AARCRSCHLVTAGPALLSQVDKSQAPTLQPPADGTFRKELHLPKHLIPCP
GCGDKNTLTLNGRAPTNPQLHAAKCNACGKKTTGAKLHNLVAQHMRATHN
VRPDPEGTPATHAPLPSQLLRTYVDSALQNHTAGLDKRMQTLEDVLMELR
QALRNQISHPALGAEDRNVVHAKPPTHAAPNNYTAPAHNSASITQELQTL
RQEVAALRAENNRLIRDLHSLRPREELHHPHPAHTPLTADDDEENATQTG
LEPQAGPRPPKNLLQHPQRKSWAQNAAAPGPVLQNLEPSTRDRISQTREA
LKQAELAPTPPWIRNARPIALYFAGIKRGPITPITKLAHCMEKLEKTAGV
ACELRKMKREVKKRYNVNKFGWIADEAMGLWIVRVGQTNVVDHCVLVDGD
RKLIIDSEEKYPIVLREDTLRACRGDGASSLRVLELTGSLQHILRRLRRY
RQLNYMDPVTDSRFQDKALDTEDNIHRNASACMGRYTRQQNSPHPVAQQW
YAEASRRLQARFPAVFTDAGRAKDQHIREAQRQRRDAPASIPSADTQSQD
PDYDPAPSSADTDSTTDSAAETTTQNPDGFVLVTRKRRRPSTGSPQARRP
PSDQRTRPRALRKQRTDRTPPERTPPQDTPTEVGDEIFPIPHAAHTPRRT
GTQTLDGAARPSLPAILALPPGTRLDSPTLEGKAAEHDEASDIASKQTAA
ADTYMDIDTTPPSPAHTGGNGRPESSPQVTTENRHVDTAENHSAISPAST
PATQTINE*
back to top

spliced messenger RNA

>Gvermi3553.t1 ID=Gvermi3553.t1|Name=Gvermi3553.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=3777bp|location=Sequence derived from alignment at ScGOVlb_41:3268690..3277512+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCACGCTGGAAAATGTTCTCATAGAGCTTCACAATGACCTCCGGAA
CCCAGTCCAGTACCCACACTCGCGTGCTCAGGGACGTGAGGCGCCCGCGA
CAGTCCCCACGAATCATGCGGCACAGACTTCCCACGACAATACGACCAAC
GGCCCTGAGGCTATTGCTCACGAAATCAACGCGCTGAAACGCGGGGTAGC
GGCACTGCGAGCAGAAAACAACCAGCTCCTTAGAGCCGTCAACCGCAACA
ACAATACCCTTTCAAGAAGAGAGCCACCTCTCTCAACGCCATCAAGTGAC
AACAACCTCCCAAGCCCCAACGAGGACGCACAACAAATGGCCCCAGCCGT
CCGACACAACCCCGATCAAGAGCCGCCTCGCCCCAACGCCACACAGCGCA
AGACCTGGGCGCAGATCGCCGCAGACCCAGGTCCCGTCCTGCAAAACTTG
GAACCCACTACGAGAGACCGAATCCACCAAGCCTGTGAGGCACTCAAACA
AGCAGAACTCGCCCCCACTCCGCCGTGGCTCCGAAATACTCGCTTGACAG
CTCTCTACTTCCTGGGCATGAAGAAAGGCCCTATCAGTCAATACTGGAAG
GCATTTGCGCACGCTATACCCCTGCGAACACTTTACAACATCTCCTTCAT
CGGTAGGGGAATCACCGAGATAATCGTGCACGAAAGTCACGCTAACCGGC
TCACCGTCACTCTTCGCGCGCTTGGCTACCGTCCGCTGGAGGACATGGAC
CCGATTATGGATCCCAGATTCCAAGAAGCCTCGCTTAATACGGAGGATAA
CATCCATCGCAACGCATCCGCCTGCCTGACCCGCTACAGGCGTCAACAGG
ACAGTTCCCACCCAGTTGCTGAGAAATGGTACATGGAGGCTTCCCAGCGA
CTTCAAGCAAGGTTTCCAGCCGTCTTTACTGAAGAGGGACGCGCCATGGA
CCACCAGATTCGTACAGCCCAGCTACAGCGTCGGAGCCATCCAACGAACA
CTCCTCACACTGAGACGCAGTCCCAGGACCCAGACTACGAACCGTCACTT
ACCAACACCGACGCAACCTCCGCGGCAGATCCCACAGACGTACCCACCGC
ACAGACCCCCGACGGCTTCACGATCATCGCCCGCAAACCCCCGGAAGAGG
AGAACGCAGTCCCCAACCACGCTCTACCACGCCCCGATGTCAACCGCACG
CTACAATTCCCCACCCCTGCTCCAACGACTCGCCGACTGCCCCAACCCAG
CCCCACCACAGATCGGGAACCGCCTCATGCGGGCAGTGCTGTTAACGGCC
ACGTCGCCCAGGAGGATTTGGAAATGGAGGACAACCCTAGCCCGTATGAC
ACTGCGGGCAGAGGAGAAAATCAGGTCGTGGTCGCCAGCCACGAGCTTGA
GGACAGATTTCAGAAAGTCGCAATGGACCTGGCATGCCACAGCTGCAAGG
TGACGAGACAGCTCCAATTGGAGGTAGACTGGAGCGATCCAGAGATACGT
GCCGCACGATGCCGCTCCTGCCACCTGGTCACAGCAGGGCCAGCTCTGCT
CTCCCAGGTCGACAAATCCCAAGCGCCTACGCTCCAGCCCCCTGCCGACG
GCACGTTTCGTAAGGAACTTCACCTGCCCAAGCACCTCATCCCCTGCCCG
GGCTGTGGCGATAAGAACACACTGACCCTTAACGGGAGAGCCCCGACCAA
CCCACAGCTACATGCCGCCAAGTGCAACGCATGCGGCAAGAAGACCACAG
GCGCTAAGCTCCACAACCTGGTGGCGCAGCACATGAGAGCAACACACAAC
GTCCGCCCCGATCCGGAGGGAACACCTGCTACGCATGCACCTCTTCCCTC
CCAGCTACTCCGCACCTACGTCGACTCGGCCCTCCAGAACCACACCGCTG
GCCTGGACAAACGCATGCAAACCCTCGAGGATGTCCTCATGGAACTACGA
CAGGCACTTCGAAACCAAATCTCACACCCAGCACTGGGTGCGGAAGACCG
CAACGTAGTACACGCCAAACCTCCAACCCACGCAGCCCCGAACAACTATA
CTGCACCAGCCCACAACTCCGCCTCCATCACTCAAGAACTCCAGACTCTG
CGACAGGAAGTGGCTGCCCTCCGCGCTGAGAACAACCGCCTCATCAGAGA
CCTCCACTCGCTCCGTCCCAGAGAGGAACTTCATCACCCACACCCCGCGC
ACACACCCCTAACCGCAGACGACGACGAAGAGAACGCCACCCAGACAGGC
TTGGAGCCTCAAGCTGGCCCCCGGCCTCCGAAGAACCTGCTCCAGCATCC
GCAACGCAAGTCCTGGGCCCAAAATGCAGCTGCACCCGGCCCCGTGCTGC
AGAACCTGGAACCTAGTACGCGGGACCGCATCAGCCAGACCCGAGAAGCT
TTGAAGCAAGCAGAGCTCGCACCCACCCCGCCCTGGATCCGCAACGCTCG
CCCGATCGCGCTGTACTTCGCCGGCATCAAAAGAGGACCTATCACGCCGA
TAACGAAACTTGCCCATTGCATGGAAAAGCTCGAAAAGACCGCAGGTGTG
GCTTGTGAGCTCCGGAAAATGAAACGCGAAGTGAAGAAAAGGTACAATGT
CAACAAGTTTGGCTGGATCGCTGACGAGGCGATGGGGCTTTGGATTGTCA
GAGTCGGTCAGACGAACGTAGTTGATCACTGCGTGCTTGTGGATGGGGAT
CGGAAGCTGATTATAGACAGTGAGGAGAAATACCCGATAGTTCTTCGCGA
AGACACTCTTCGGGCCTGTCGCGGAGATGGCGCTTCATCTCTGCGAGTAT
TGGAGCTCACGGGCTCTCTTCAACATATCCTTCGTCGGTTGAGGCGCTAC
CGCCAGCTCAACTACATGGACCCCGTTACGGACTCCCGATTCCAGGACAA
AGCGCTTGACACAGAGGACAACATCCACCGCAACGCCTCGGCCTGCATGG
GGAGGTACACGCGTCAGCAGAACAGCCCGCATCCGGTGGCCCAGCAATGG
TACGCAGAGGCCTCGAGGAGGCTACAAGCCAGATTCCCCGCCGTCTTCAC
CGACGCCGGACGTGCGAAAGACCAACACATACGAGAAGCTCAGCGACAGC
GCCGGGACGCACCAGCCAGCATACCAAGCGCAGACACCCAGTCCCAGGAT
CCTGACTACGACCCGGCACCGAGCAGTGCCGACACCGACTCGACCACGGA
CTCCGCGGCGGAAACTACCACGCAGAACCCGGACGGATTCGTCCTAGTTA
CGCGAAAGCGACGTCGACCAAGCACTGGCTCCCCACAAGCTCGGCGGCCT
CCCTCCGATCAACGCACGCGCCCCCGGGCCCTACGAAAGCAACGGACGGA
CAGAACACCCCCGGAGCGCACACCACCTCAGGATACCCCCACGGAAGTGG
GGGATGAAATTTTCCCCATCCCACATGCGGCGCACACACCCCGCCGGACC
GGAACACAAACGCTAGACGGGGCAGCGCGCCCCAGCCTACCCGCAATCCT
CGCCCTCCCGCCGGGCACACGACTGGACTCCCCCACCCTTGAAGGCAAGG
CAGCGGAACACGACGAAGCGTCTGACATCGCTAGCAAGCAGACGGCCGCA
GCGGACACATACATGGATATAGACACCACGCCACCCTCGCCTGCCCACAC
TGGGGGCAACGGTCGTCCTGAAAGCAGTCCGCAAGTCACCACCGAAAACA
GACACGTAGATACTGCCGAGAACCACAGCGCGATCTCCCCAGCCTCGACG
CCTGCAACCCAAACCATCAATGAGTAA
back to top

protein sequence of Gvermi3553.t1

>Gvermi3553.t1 ID=Gvermi3553.t1|Name=Gvermi3553.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1259bp
MRTLENVLIELHNDLRNPVQYPHSRAQGREAPATVPTNHAAQTSHDNTTN
GPEAIAHEINALKRGVAALRAENNQLLRAVNRNNNTLSRREPPLSTPSSD
NNLPSPNEDAQQMAPAVRHNPDQEPPRPNATQRKTWAQIAADPGPVLQNL
EPTTRDRIHQACEALKQAELAPTPPWLRNTRLTALYFLGMKKGPISQYWK
AFAHAIPLRTLYNISFIGRGITEIIVHESHANRLTVTLRALGYRPLEDMD
PIMDPRFQEASLNTEDNIHRNASACLTRYRRQQDSSHPVAEKWYMEASQR
LQARFPAVFTEEGRAMDHQIRTAQLQRRSHPTNTPHTETQSQDPDYEPSL
TNTDATSAADPTDVPTAQTPDGFTIIARKPPEEENAVPNHALPRPDVNRT
LQFPTPAPTTRRLPQPSPTTDREPPHAGSAVNGHVAQEDLEMEDNPSPYD
TAGRGENQVVVASHELEDRFQKVAMDLACHSCKVTRQLQLEVDWSDPEIR
AARCRSCHLVTAGPALLSQVDKSQAPTLQPPADGTFRKELHLPKHLIPCP
GCGDKNTLTLNGRAPTNPQLHAAKCNACGKKTTGAKLHNLVAQHMRATHN
VRPDPEGTPATHAPLPSQLLRTYVDSALQNHTAGLDKRMQTLEDVLMELR
QALRNQISHPALGAEDRNVVHAKPPTHAAPNNYTAPAHNSASITQELQTL
RQEVAALRAENNRLIRDLHSLRPREELHHPHPAHTPLTADDDEENATQTG
LEPQAGPRPPKNLLQHPQRKSWAQNAAAPGPVLQNLEPSTRDRISQTREA
LKQAELAPTPPWIRNARPIALYFAGIKRGPITPITKLAHCMEKLEKTAGV
ACELRKMKREVKKRYNVNKFGWIADEAMGLWIVRVGQTNVVDHCVLVDGD
RKLIIDSEEKYPIVLREDTLRACRGDGASSLRVLELTGSLQHILRRLRRY
RQLNYMDPVTDSRFQDKALDTEDNIHRNASACMGRYTRQQNSPHPVAQQW
YAEASRRLQARFPAVFTDAGRAKDQHIREAQRQRRDAPASIPSADTQSQD
PDYDPAPSSADTDSTTDSAAETTTQNPDGFVLVTRKRRRPSTGSPQARRP
PSDQRTRPRALRKQRTDRTPPERTPPQDTPTEVGDEIFPIPHAAHTPRRT
GTQTLDGAARPSLPAILALPPGTRLDSPTLEGKAAEHDEASDIASKQTAA
ADTYMDIDTTPPSPAHTGGNGRPESSPQVTTENRHVDTAENHSAISPAST
PATQTINE*
back to top

mRNA from alignment at ScGOVlb_41:3268690..3277512+

Legend: polypeptidestart_codonCDSexonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi3553.t1 ID=Gvermi3553.t1|Name=Gvermi3553.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=8823bp|location=Sequence derived from alignment at ScGOVlb_41:3268690..3277512+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCGCACGCTGGAAAATGTTCTCATAGAGCTTCACAATGACCTCCGGAA
CCCAGTCCAGTACCCACACTCGCGTGCTCAGGGACGTGAGGCGCCCGCGA
CAGTCCCCACGAATCATGCGGCACAGACTTCCCACGACAATACGACCAAC
GGCCCTGAGGCTATTGCTCACGAAATCAACGCGCTGAAACGCGGGGTAGC
GGCACTGCGAGCAGAAAACAACCAGCTCCTTAGAGCCGTCAACCGCAACA
ACAATACCCTTTCAAGAAGAGAGCCACCTCTCTCAACGCCATCAAGTGAC
AACAACCTCCCAAGCCCCAACGAGGACGCACAACAAATGGCCCCAGCCGT
CCGACACAACCCCGATCAAGAGCCGCCTCGCCCCAACGCCACACAGCGCA
AGACCTGGGCGCAGATCGCCGCAGACCCAGGTCCCGTCCTGCAAAACTTG
GAACCCACTACGAGAGACCGAATCCACCAAGCCTGTGAGGCACTCAAACA
AGCAGAACTCGCCCCCACTCCGCCGTGGCTCCGAAATACTCGCTTGACAG
CTCTCTACTTCCTGGGCATGAAGAAAGGCCCTATCAGTCAATACTGGAAG
GCATTTGCGCACGCTATACCCCTGCGAACACTTTACAACATCTCCTTCAT
CGGTAGGGGAATCACCGAGATAATCGTGCACGAAAGTCACGCTAACCGGC
TCACCGTCACTCTTCGCGCGCTTGGCTACCGTCCGCTGGAGGACATGGAC
CCGATTATGGATCCCAGATTCCAAGAAGCCTCGCTTAATACGGAGGATAA
CATCCATCGCAACGCATCCGCCTGCCTGACCCGCTACAGGCGTCAACAGG
ACAGTTCCCACCCAGTTGCTGAGAAATGGTACATGGAGGCTTCCCAGCGA
CTTCAAGCAAGGTTTCCAGCCGTCTTTACTGAAGAGGGACGCGCCATGGA
CCACCAGATTCGTACAGCCCAGCTACAGCGTCGGAGCCATCCAACGAACA
CTCCTCACACTGAGACGCAGTCCCAGGACCCAGACTACGAACCGTCACTT
ACCAACACCGACGCAACCTCCGCGGCAGATCCCACAGACGTACCCACCGC
ACAGACCCCCGACGGCTTCACGATCATCGCCCGCAAACCCCGTCGCCCAA
GCACGGGCTCCCCCCACGCCCGCCGACCTCCCTCTGACCAACGTACGCGG
CCCAGCGCGCCGCAGAAGCAGAGAACGGACAGCACGCTGCCCTCACAGGC
TCCGCCTCAAGACGACACCGCGGCCGAGGTGGATGAAATCACCCCTGCCC
CACACACGCCGCGCGAGAACCGTAGCCCACACCTCACCCCCAGGACGGGA
GTTGAAAGCCACCACACGCCCCGCCCTCACACACACACTCGCAGGGAGTG
GCTCGACTCCCACGCTGCGGCGAGAGCCGCTCCATACGTCGCCGCAAGGT
CCGGAGGACCAGACACACCCATGACTGCTCCGAACTCCGGGGTAGGACGC
AACTCAGCGCCCACCTCGGTACAGCACACCggcaactgcaatgccgtgtg
cggttcttcaacctccacgtcggcgttctccagaggttctgcgggggatt
ccgcttgcctccgatcatgcattctcctaaggcgagtcctgaaacgctcc
acagaggagccaggattccgaaggagactttcagggtcctccagtgtggc
ggccatctcctgagaggagctgagcgtgctgcgtccaccgatggagccgg
ttgcttgaggatcctgtaggagggtttccatgggatgttctgaggggtct
ataggggagtaggtcggaggtgattttcgtccacttccgaatcaccttaa
ggaagaattccactattggggttcagacgttgcgaactagaaacacgggt
ctgctgtgacttgtgctaatactttaggaactgtgaccttctaagtcggg
agacgggttgtggtactgttagccctcctctcgaggtagtaaagcagaac
gtccgttaggagtttttgttgactccgaaagtgcgtgttcctaaaggtgg
tctccggtatccgctgtcgcaagccggggaaagttttgaaggagatccgc
aaaacaccaagaggaggtggggctccctgggccgacaatgctcctacagg
ctctgttacgaagcgacctggtgatcggtggcttagaaaccggagttgat
cgacgagagactccaaccggaaaagtagatgaagactaaagggtgcttgt
ctgtacttccctcgaggtgaagctcaaccggcagattaagtatcaagccg
ggagcccgcctcggtaggtctcactcccggattaattagctgcataaatt
aactaaaataaataataatgctaccgtctcttaaggatactttagcgcac
gcaggcggaattatgcagcactcagcccagttaataaatacgagcccttc
ttaggaatattatttcccaaggccaaaccattatatcgccttaggaggcc
ttgtactacataAAGGAGCCATGATATGACGCGTCCTTGCTAGCATTTGT
TTTGCTCGGTAGACCTTACACGTGTGATACGTGGACTTTGATGTTGAGGA
GATTGTAGCCGCCGGAAAGGCGTTGCAATTTTTTTTCTAGACATGTAACT
AATCCTTTGTAATTTTATTTGTTGAAGAACGGGAGATTGGGGTTTAAAGA
GAAATTTCTAGGGGCTTTAGAAGCAAAACGCGATGGGAATAGATAGCGTA
CGGGGCCTCGGGGAGGGAGTATGTAGGAGAATATGTATTTGTGGAGGGTT
CAGGGGGGAGGGCCAGCAGGGGGATGAGGAAGAGAGGATTTTCTACGGAA
GAAAGGTAGTGCTATTTAGGGTTCAAGTAGATCAATAAGAAATAAGTTTT
ACCTTGTAGAAGTTGAGCGAGTTGTAAAGATTTTTGAAAAAAACTGGAAA
TTTCTGAATGGCCACATGACCTTGAGTGTTTGCACATTGTTCGCGCTGGT
CCAGAATCTCGTTAAAAACTGTAGAATTCGGAGTGGGGTCCTCTTTGCCC
AAAATGAAAAATGGTCAATTGCCCCCGTATACTTCAAAACCGCTAGAACC
CTCAGCCCTCTAGAGTTACTGAACTGCTAATCATAATCTTGCAAAAAAAA
AGTGATATTCTAAGTGACTTCTTAatcccgaaagcccccaaaaccctggg
ccacttagaccttgaagactgcgagtcagaattttgtaaaatactgtgaa
ttctgagttctgctcctctcatatccgtaaaacccctagaacccctaagc
tccatagaatcattttagaatacaaatcaaaaattcacaaaaaaccgtta
gattctgattgacttccctaaccctaaatctacaaaaaccctaggccctt
ttaaacttgcagactgcaaatcaaaattttgcaaattactgtgaacttct
gagtgacgtcattctcctgtccctaaaacgcccggatctcccggtctcct
taaaaacattttacaatacaTAGGGGTAAAAATTTCTGCAAAAGTTTTGA
CTCGTATTTGAGGAAGTCCAGGAGGTTTCGGGTTCTGTGTGTTTGAGGGA
TATGGACACAattcaaaatttcactattacctccaaaaatctggttcgta
ctctaaaagttctagagggccaggggttcttaaaatttgggcgactggga
attagatcagaatttcacagtaatctgcaaaattcttatttcatgtctca
agcgtctactgggcaaatggatataggggtttgaagggcagggacgccac
tcagaatattacaattatcagcaaaatactgattcgcattctaaaacgtc
taaaagtcctggaggtgcttttcagatgagggatagagaaactgtaaaat
acttcactactttctgcagaactccaatatttcgatttttaaaggtcaag
ggggctcGGATTACTATATATTGcgctcggatgcgacccttgatcctctc
gagttcaccagacacatatgagcgaaacagatacacgatgcacagctcag
ccccagcccattcacccctctgccccacttcagagaccaacttgaagccg
ccatcaactgctccaaaacgagaaaagcgcccggacgagatgggactaca
aacgaaatgttccgcctatctccgaaggacatgggcggcgccttaaaatc
cctatggcgcaaggtaggtgaacatcgctatctcccaacagtcctacgca
caggttggctcagaccaatactcgaaaagagtgacagcagccgtccaagc
tcatatcgcccagtcgccctgctcactgatctccggtagatcatagcgtc
agctgcggggcgcctcctacaagaaaacgtcgagtacagcagataccaat
ggggaaacagggcctgggtatgtacagaggatgccatctcccacgcacaa
tcacgaattcgggatggggcaacccacatagccgtgctggacctcacccg
tgctttcCGCTTTGTTCGGTGtacagctcccaacttgctccacaaaatta
gaatagagtcaacctcaacagggtcttctttccacgccgattttgtcggg
cctgttcccccggctgtggttttgctagaAGCCGAAATAAGTAAGTACTT
CGGTTTTACTGACTCTACTCTACGGCCCTATCTACTTTGTGACGATGTTG
CACGCGCACAGGCGCGACAGTGGCGCGAAGACGACGCGCCGATCGTCGAA
AACCACGAGCTAGACGCCGACGGAGAGGCTCCGTACGGCTACTATCGCGA
CGACGGTGCGGGCCGTGGGTGCTGGCACCAATCAGAAGGCCGGGATAGAC
ACACGTGGCCGGTCGGTTGCCTCCTCGGTAACCCCTCGGCTCGTACAACT
TCCCCGAGTGGACCCCTCTCGCCCCTTGCGCCAATCATCGCAGCCGATCA
ACTCAACCCCTCGCCGCACTGAACTCAACATGACAGATCGCCCCTCCCAC
CGAGAGAGGGCGAGCATCAAAACGTCCGTCTAGACGCGCGACCGTAGCCA
CGACCTCGAACTAGCGGAAGAGGAGAACGCAGTCCCCAACCACGCTCTAC
CACGCCCCGATGTCAACCGCACGCTACAATTCCCCACCCCTGCTCCAACG
ACTCGCCGACTGCCCCAACCCAGCCCCACCACAGATCGGGAACCGCCTCA
TGCGGGCAGTGCTGTTAACGGCCACGTCGCCCAGGAGGATTTGGAAATGG
AGGACAACCCTAGCCCGTATGACACTGCGGGCAGAGGAGAAAATCAGGTC
GTGGTCGCCAGCCACGAGCTTGAGGACAGATTTCAGAAAGTCGCAATGGA
CCTGGCATGCCACAGCTGCAAGGTGACGAGACAGCTCCAATTGGAGGTAG
ACTGGAGCGATCCAGAGATACGTGCCGCACGATGCCGCTCCTGCCACCTG
GTCACAGCAGGGCCAGCTCTGCTCTCCCAGGTCGACAAATCCCAAGCGCC
TACGCTCCAGCCCCCTGCCGACGGCACGTTTCGTAAGGAACTTCACCTGC
CCAAGCACCTCATCCCCTGCCCGGGCTGTGGCGATAAGAACACACTGACC
CTTAACGGGAGAGCCCCGACCAACCCACAGCTACATGCCGCCAAGTGCAA
CGCATGCGGCAAGAAGACCACAGGCGCTAAGCTCCACAACCTGGTGGCGC
AGCACATGAGAGCAACACACAACGTCCGCCCCGATCCGGAGGGAACACCT
GCTACGCATGCACCTCTTCCCTCCCAGCTACTCCGCACCTACGTCGACTC
GGCCCTCCAGAACCACACCGCTGGCCTGGACAAACGCATGCAAACCCTCG
AGGATGTCCTCATGGAACTACGACAGGCACTTCGAAACCAAATCTCACAC
CCAGCACTGGGTGCGGAAGACCGCAACGTAGTACACGCCAAACCTCCAAC
CCACGCAGCCCCGAACAACTATACTGCACCAGCCCACAACTCCGCCTCCA
TCACTCAAGAACTCCAGACTCTGCGACAGGAAGTGGCTGCCCTCCGCGCT
GAGAACAACCGCCTCATCAGAGACCTCCACTCGCTCCGTCCCAGAGAGGA
ACTTCATCACCCACACCCCGCGCACACACCCCTAACCGCAGACGACGACG
AAGAGAACGCCACCCAGACAGGCTTGGAGCCTCAAGCTGGCCCCCGGCCT
CCGAAGAACCTGCTCCAGCATCCGCAACGCAAGTCCTGGGCCCAAAATGC
AGCTGCACCCGGCCCCGTGCTGCAGAACCTGGAACCTAGTACGCGGGACC
GCATCAGCCAGACCCGAGAAGCTTTGAAGCAAGCAGAGCTCGCACCCACC
CCGCCCTGGATCCGCAACGCTCGCCCGATCGCGCTGTACTTCGCCGGCAT
CAAAAGAGGACCTATCAGTCAGTATCGCAAAGCGCTCTCGCACGCCATAC
ATCTACggggttaggggttagggttaggggttagggttaggggtttaggg
gtttaggggttagggccccgaatgatgccgaaactctcttgacagagata
attgactgcggagatccaagagcgcactcagagtccatgacggaagctaa
gaaggtggagattaaaaacttgctcaagcgaggaacattcaaggtaatcc
tcaaggaggagcttccagttgatggaaacatactCATACaagtcgggacg
gaccatatgtctttgtagaaggcatctccattcttgcctaccttgtggac
acgcttggttaaacagttcgccacagtgtcaggggttaggccttctctgt
cgagaacatccatgcccaataaagccgtggctggggaagtaattgccttc
agcgatctcttcgacgttgcggttactctctcagaagaacttgaaatgtt
gctgaacaaacgtgttccggtgcagttgttctcggatagcaaatcactat
tcgacgtgatttcaaagggttcgaggacatccgagaaacgtatgatgatc
gacattgccgcagctagagaagggttcaagtccaaggttatatctgacat
cggctttgtgcgatcgtcgcacaacatcgcggatggactgacaaaagaga
tgagtcaagcaggtctctgctccgcgctcgctactgggaagttaaaagta
actccagagcaatggatagtcagaaactaaaTGTCGTCACGGACATAGCA
ACTAAGTCAGAAGTAACGCCTTTACTTGCCGGCTAACTTGAACAATTTGA
GGGACAGAAGCGTCTGAGCTCCCGGTCCACCTATGGTGACAGCTACGCCC
GGAAATGACTTGCACATTGAAGTGAGGCTTCGGCCGGGCAGTGCGACGGC
CGGACCCAAATTGGAGGGAGTGTCGCACGGTTTCCCCGCCGCATTCCAGC
CCCCCAGATCTGTAATAATTTCCCGCGTTTTTGGAACCCACAGATTTGAC
TCCCGAGTTGATTTTCGGATGTCCAGCGCCGATAACGAAACTTGCCCATT
GCATGGAAAAGCTCGAAAAGACCGCAGGTGTGGCTTGTGAGCTCCGGAAA
ATGAAACGCGAAGTGAAGAAAAGGTACAATGTCAACAAGTTTGGCTGGAT
CGCTGACGAGGCGATGGGGCTTTGGATTGTCAGAGTCGGTCAGACGAACG
TAGTTGATCACTGCGTGCTTGTGGATGGGGATCGGAAGCTGATTATAGAC
AGTGAGGAGAAATACCCGATAGTTCTTCGCGAAGACACTCTTCGGGCCTG
TCGCGGAGATGGCGCTTCATCTCTGCGAGTATTGGAGCTCACGGGCTCTC
TTCAACATATCCTTCGTCGGTTGAGGCGTCACGGAAATCGTCGTCCATGA
GAATATGGCTGATCGACTATCCGTAACCCTCCGGGCGCTAGGCTACCGCC
AGCTCAACTACATGGACCCCGTTACGGACTCCCGATTCCAGGACAAAGCG
CTTGACACAGAGGACAACATCCACCGCAACGCCTCGGCCTGCATGGGGAG
GTACACGCGTCAGCAGAACAGCCCGCATCCGGTGGCCCAGCAATGGTACG
CAGAGGCCTCGAGGAGGCTACAAGCCAGATTCCCCGCCGTCTTCACCGAC
GCCGGACGTGCGAAAGACCAACACATACGAGAAGCTCAGCGACAGCGCCG
GGACGCACCAGCCAGCATACCAAGCGCAGACACCCAGTCCCAGGATCCTG
ACTACGACCCGGCACCGAGCAGTGCCGACACCGACTCGACCACGGACTCC
GCGGCGGAAACTACCACGCAGAACCCGGACGGATTCGTCCTAGTTACGCG
AAAGCGACGTCGACCAAGCACTGGCTCCCCACAAGCTCGGCGGCCTCCCT
CCGATCAACGCACGCGCCCCCGGGCCCTACGAAAGCAACGGACGGACAGA
ACACCCCCGGAGCGCACACCACCTCAGGATACCCCCACGGAAGTGGGGGA
TGAAATTTTCCCCATCCCACATGCGGCGCACACACCCCGCCGGACCGGAA
CACAAACGCTAGACGGGGCAGCGCGCCCCAGCCTACCCGCAATCCTCGCC
CTCCCGCCGGGCACACGACTGGACTCCCCCACCCTTGAAGGCAAGGCAGC
GGAACACGACGAAGCGTCTGACATCGCTAGCAAGCAGACGGCCGCAGCGG
ACACATACATGGATATAGACACCACGCCACCCTCGCCTGCCCACACTGGG
GGCAACGGTCGTCCTGAAAGCAGTCCGCAAGTCACCACCGAAAACAGACA
CGTAGATACTGCCGAGAACCACAGCGCGATCTCCCCAGCCTCGACGCCTG
CAACCCAAACCATCAATGAGTAA
back to top

Coding sequence (CDS) from alignment at ScGOVlb_41:3268690..3277512+

>Gvermi3553.t1 ID=Gvermi3553.t1|Name=Gvermi3553.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=3777bp|location=Sequence derived from alignment at ScGOVlb_41:3268690..3277512+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCGCACGCTGGAAAATGTTCTCATAGAGCTTCACAATGACCTCCGGAA
CCCAGTCCAGTACCCACACTCGCGTGCTCAGGGACGTGAGGCGCCCGCGA
CAGTCCCCACGAATCATGCGGCACAGACTTCCCACGACAATACGACCAAC
GGCCCTGAGGCTATTGCTCACGAAATCAACGCGCTGAAACGCGGGGTAGC
GGCACTGCGAGCAGAAAACAACCAGCTCCTTAGAGCCGTCAACCGCAACA
ACAATACCCTTTCAAGAAGAGAGCCACCTCTCTCAACGCCATCAAGTGAC
AACAACCTCCCAAGCCCCAACGAGGACGCACAACAAATGGCCCCAGCCGT
CCGACACAACCCCGATCAAGAGCCGCCTCGCCCCAACGCCACACAGCGCA
AGACCTGGGCGCAGATCGCCGCAGACCCAGGTCCCGTCCTGCAAAACTTG
GAACCCACTACGAGAGACCGAATCCACCAAGCCTGTGAGGCACTCAAACA
AGCAGAACTCGCCCCCACTCCGCCGTGGCTCCGAAATACTCGCTTGACAG
CTCTCTACTTCCTGGGCATGAAGAAAGGCCCTATCAGTCAATACTGGAAG
GCATTTGCGCACGCTATACCCCTGCGAACACTTTACAACATCTCCTTCAT
CGGTAGGGGAATCACCGAGATAATCGTGCACGAAAGTCACGCTAACCGGC
TCACCGTCACTCTTCGCGCGCTTGGCTACCGTCCGCTGGAGGACATGGAC
CCGATTATGGATCCCAGATTCCAAGAAGCCTCGCTTAATACGGAGGATAA
CATCCATCGCAACGCATCCGCCTGCCTGACCCGCTACAGGCGTCAACAGG
ACAGTTCCCACCCAGTTGCTGAGAAATGGTACATGGAGGCTTCCCAGCGA
CTTCAAGCAAGGTTTCCAGCCGTCTTTACTGAAGAGGGACGCGCCATGGA
CCACCAGATTCGTACAGCCCAGCTACAGCGTCGGAGCCATCCAACGAACA
CTCCTCACACTGAGACGCAGTCCCAGGACCCAGACTACGAACCGTCACTT
ACCAACACCGACGCAACCTCCGCGGCAGATCCCACAGACGTACCCACCGC
ACAGACCCCCGACGGCTTCACGATCATCGCCCGCAAACCCCCGGAAGAGG
AGAACGCAGTCCCCAACCACGCTCTACCACGCCCCGATGTCAACCGCACG
CTACAATTCCCCACCCCTGCTCCAACGACTCGCCGACTGCCCCAACCCAG
CCCCACCACAGATCGGGAACCGCCTCATGCGGGCAGTGCTGTTAACGGCC
ACGTCGCCCAGGAGGATTTGGAAATGGAGGACAACCCTAGCCCGTATGAC
ACTGCGGGCAGAGGAGAAAATCAGGTCGTGGTCGCCAGCCACGAGCTTGA
GGACAGATTTCAGAAAGTCGCAATGGACCTGGCATGCCACAGCTGCAAGG
TGACGAGACAGCTCCAATTGGAGGTAGACTGGAGCGATCCAGAGATACGT
GCCGCACGATGCCGCTCCTGCCACCTGGTCACAGCAGGGCCAGCTCTGCT
CTCCCAGGTCGACAAATCCCAAGCGCCTACGCTCCAGCCCCCTGCCGACG
GCACGTTTCGTAAGGAACTTCACCTGCCCAAGCACCTCATCCCCTGCCCG
GGCTGTGGCGATAAGAACACACTGACCCTTAACGGGAGAGCCCCGACCAA
CCCACAGCTACATGCCGCCAAGTGCAACGCATGCGGCAAGAAGACCACAG
GCGCTAAGCTCCACAACCTGGTGGCGCAGCACATGAGAGCAACACACAAC
GTCCGCCCCGATCCGGAGGGAACACCTGCTACGCATGCACCTCTTCCCTC
CCAGCTACTCCGCACCTACGTCGACTCGGCCCTCCAGAACCACACCGCTG
GCCTGGACAAACGCATGCAAACCCTCGAGGATGTCCTCATGGAACTACGA
CAGGCACTTCGAAACCAAATCTCACACCCAGCACTGGGTGCGGAAGACCG
CAACGTAGTACACGCCAAACCTCCAACCCACGCAGCCCCGAACAACTATA
CTGCACCAGCCCACAACTCCGCCTCCATCACTCAAGAACTCCAGACTCTG
CGACAGGAAGTGGCTGCCCTCCGCGCTGAGAACAACCGCCTCATCAGAGA
CCTCCACTCGCTCCGTCCCAGAGAGGAACTTCATCACCCACACCCCGCGC
ACACACCCCTAACCGCAGACGACGACGAAGAGAACGCCACCCAGACAGGC
TTGGAGCCTCAAGCTGGCCCCCGGCCTCCGAAGAACCTGCTCCAGCATCC
GCAACGCAAGTCCTGGGCCCAAAATGCAGCTGCACCCGGCCCCGTGCTGC
AGAACCTGGAACCTAGTACGCGGGACCGCATCAGCCAGACCCGAGAAGCT
TTGAAGCAAGCAGAGCTCGCACCCACCCCGCCCTGGATCCGCAACGCTCG
CCCGATCGCGCTGTACTTCGCCGGCATCAAAAGAGGACCTATCACGCCGA
TAACGAAACTTGCCCATTGCATGGAAAAGCTCGAAAAGACCGCAGGTGTG
GCTTGTGAGCTCCGGAAAATGAAACGCGAAGTGAAGAAAAGGTACAATGT
CAACAAGTTTGGCTGGATCGCTGACGAGGCGATGGGGCTTTGGATTGTCA
GAGTCGGTCAGACGAACGTAGTTGATCACTGCGTGCTTGTGGATGGGGAT
CGGAAGCTGATTATAGACAGTGAGGAGAAATACCCGATAGTTCTTCGCGA
AGACACTCTTCGGGCCTGTCGCGGAGATGGCGCTTCATCTCTGCGAGTAT
TGGAGCTCACGGGCTCTCTTCAACATATCCTTCGTCGGTTGAGGCGCTAC
CGCCAGCTCAACTACATGGACCCCGTTACGGACTCCCGATTCCAGGACAA
AGCGCTTGACACAGAGGACAACATCCACCGCAACGCCTCGGCCTGCATGG
GGAGGTACACGCGTCAGCAGAACAGCCCGCATCCGGTGGCCCAGCAATGG
TACGCAGAGGCCTCGAGGAGGCTACAAGCCAGATTCCCCGCCGTCTTCAC
CGACGCCGGACGTGCGAAAGACCAACACATACGAGAAGCTCAGCGACAGC
GCCGGGACGCACCAGCCAGCATACCAAGCGCAGACACCCAGTCCCAGGAT
CCTGACTACGACCCGGCACCGAGCAGTGCCGACACCGACTCGACCACGGA
CTCCGCGGCGGAAACTACCACGCAGAACCCGGACGGATTCGTCCTAGTTA
CGCGAAAGCGACGTCGACCAAGCACTGGCTCCCCACAAGCTCGGCGGCCT
CCCTCCGATCAACGCACGCGCCCCCGGGCCCTACGAAAGCAACGGACGGA
CAGAACACCCCCGGAGCGCACACCACCTCAGGATACCCCCACGGAAGTGG
GGGATGAAATTTTCCCCATCCCACATGCGGCGCACACACCCCGCCGGACC
GGAACACAAACGCTAGACGGGGCAGCGCGCCCCAGCCTACCCGCAATCCT
CGCCCTCCCGCCGGGCACACGACTGGACTCCCCCACCCTTGAAGGCAAGG
CAGCGGAACACGACGAAGCGTCTGACATCGCTAGCAAGCAGACGGCCGCA
GCGGACACATACATGGATATAGACACCACGCCACCCTCGCCTGCCCACAC
TGGGGGCAACGGTCGTCCTGAAAGCAGTCCGCAAGTCACCACCGAAAACA
GACACGTAGATACTGCCGAGAACCACAGCGCGATCTCCCCAGCCTCGACG
CCTGCAACCCAAACCATCAATGAGTAA
back to top