Gvermi2365.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi2365.t1
Unique NameGvermi2365.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length397
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3416contigScGOVlb_3416:85..1273 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi2365Gvermi2365Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_3416 85..1273 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi2365.t1.CDS1Gvermi2365.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_3416 85..1273 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi2365.t1.exon1Gvermi2365.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_3416 85..1273 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi2365.t1.start1Gvermi2365.t1.start1Gracilaria vermiculophylla HapMaleFtJ_2017 malestart_codonScGOVlb_3416 1271..1273 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi2365.t1Gvermi2365.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_3416 85..1273 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi2365.t1 ID=Gvermi2365.t1|Name=Gvermi2365.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=397bp
MLMIFRIEKVESSVVVSKGDGETIGNDEDETSTASPKLNEDVESVVANDV
VHPSIGTEKVNHSHSSFTENLSESTSEVSKPSSFVDLASPFHTIESPLVL
QTPFDAITSSFSSITDSSSATITDWGPEGKDSNSLCSRISATATSKLSFP
PTTGQNLVVLHNESENVLSTSDLMDEFDSVVYYQTSFATNSLEITTAHRY
EGTLSLQKSSDFVNSHRTADDANVVMNRCLSSRHTSCATGWRRNPWWTNS
INNCSKTLGNRYHCSVKRCASTNAKSTQSQAFSMNQTSEAVLKGTDGWQR
PDSDRTLPASSLSSNRPVSSQLVHVIQSVLCYTGFRTKRKFAGVVLYPRY
SCEMVAMAIAFGLSLPQNSLNVSFAVVDRFTLHVVHLRFYRLIIFAX
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spliced messenger RNA

>Gvermi2365.t1 ID=Gvermi2365.t1|Name=Gvermi2365.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1189bp|location=Sequence derived from alignment at ScGOVlb_3416:85..1273- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCATGATCTTTCGAATCGAGAAGGTGGAATCATCTGTTGTGGTGAG
CAAAGGTGATGGGGAAACTATTGGAAACGATGAAGACGAGACGTCGACAG
CCTCGCCAAAACTGAACGAGGATGTTGAATCGGTAGTGGCGAACGATGTG
GTCCATCCTTCCATCGGAACCGAGAAAGTAAATCATTCTCATTCATCTTT
TACTGAGAATCTGTCCGAAAGTACCTCGGAAGTTTCGAAACCATCAAGCT
TCGTTGACTTGGCATCTCCCTTCCACACCATCGAATCACCGCTCGTGCTA
CAAACGCCGTTTGATGCAATCACTTCTTCATTTTCTTCAATCACCGATTC
TTCCAGTGCGACCATTACTGATTGGGGACCAGAAGGAAAAGATTCCAATT
CGTTGTGTTCTCGCATATCAGCAACCGCAACATCGAAGCTGTCCTTTCCG
CCAACAACAGGACAGAATCTCGTTGTTCTTCACAACGAATCAGAGAATGT
ACTATCGACTTCCGATCTTATGGACGAGTTTGACTCTGTGGTTTACTATC
AGACCTCCTTTGCTACAAATTCTCTGGAGATCACAACAGCGCATCGCTAC
GAAGGAACGCTGTCGTTGCAGAAATCATCGGACTTCGTGAATAGTCATCG
AACCGCGGATGACGCCAACGTGGTGATGAATCGCTGTCTTTCTAGCAGGC
ACACCAGTTGTGCCACCGGTTGGCGTAGAAATCCGTGGTGGACCAATAGC
ATCAACAACTGTTCCAAAACGCTCGGCAACCGCTACCATTGTTCTGTAAA
GCGGTGTGCTAGTACCAATGCGAAATCGACCCAATCTCAAGCTTTTTCAA
TGAATCAAACAAGTGAAGCCGTTTTGAAGGGCACAGATGGTTGGCAACGC
CCAGATTCCGACAGAACCCTTCCAGCATCGTCGTTGAGCAGCAACAGACC
AGTCAGTTCACAACTTGTCCACGTGATTCAAAGTGTGCTATGCTATACAG
GCTTCCGGACGAAGAGGAAGTTTGCAGGGGTTGTGCTGTATCCACGGTAT
TCTTGCGAGATGGTGGCTATGGCGATTGCTTTTGGTTTATCATTGCCCCA
GAACAGTCTCAATGTCTCCTTCGCTGTGGTCGATCGCTTCACCTTGCATG
TGGTACATCTCCGCTTCTATCGACTCATCATCTTCGCAG
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protein sequence of Gvermi2365.t1

>Gvermi2365.t1 ID=Gvermi2365.t1|Name=Gvermi2365.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=397bp
MLMIFRIEKVESSVVVSKGDGETIGNDEDETSTASPKLNEDVESVVANDV
VHPSIGTEKVNHSHSSFTENLSESTSEVSKPSSFVDLASPFHTIESPLVL
QTPFDAITSSFSSITDSSSATITDWGPEGKDSNSLCSRISATATSKLSFP
PTTGQNLVVLHNESENVLSTSDLMDEFDSVVYYQTSFATNSLEITTAHRY
EGTLSLQKSSDFVNSHRTADDANVVMNRCLSSRHTSCATGWRRNPWWTNS
INNCSKTLGNRYHCSVKRCASTNAKSTQSQAFSMNQTSEAVLKGTDGWQR
PDSDRTLPASSLSSNRPVSSQLVHVIQSVLCYTGFRTKRKFAGVVLYPRY
SCEMVAMAIAFGLSLPQNSLNVSFAVVDRFTLHVVHLRFYRLIIFAX
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mRNA from alignment at ScGOVlb_3416:85..1273-

Legend: CDSpolypeptideexonstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi2365.t1 ID=Gvermi2365.t1|Name=Gvermi2365.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1189bp|location=Sequence derived from alignment at ScGOVlb_3416:85..1273- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCTCATGATCTTTCGAATCGAGAAGGTGGAATCATCTGTTGTGGTGAG
CAAAGGTGATGGGGAAACTATTGGAAACGATGAAGACGAGACGTCGACAG
CCTCGCCAAAACTGAACGAGGATGTTGAATCGGTAGTGGCGAACGATGTG
GTCCATCCTTCCATCGGAACCGAGAAAGTAAATCATTCTCATTCATCTTT
TACTGAGAATCTGTCCGAAAGTACCTCGGAAGTTTCGAAACCATCAAGCT
TCGTTGACTTGGCATCTCCCTTCCACACCATCGAATCACCGCTCGTGCTA
CAAACGCCGTTTGATGCAATCACTTCTTCATTTTCTTCAATCACCGATTC
TTCCAGTGCGACCATTACTGATTGGGGACCAGAAGGAAAAGATTCCAATT
CGTTGTGTTCTCGCATATCAGCAACCGCAACATCGAAGCTGTCCTTTCCG
CCAACAACAGGACAGAATCTCGTTGTTCTTCACAACGAATCAGAGAATGT
ACTATCGACTTCCGATCTTATGGACGAGTTTGACTCTGTGGTTTACTATC
AGACCTCCTTTGCTACAAATTCTCTGGAGATCACAACAGCGCATCGCTAC
GAAGGAACGCTGTCGTTGCAGAAATCATCGGACTTCGTGAATAGTCATCG
AACCGCGGATGACGCCAACGTGGTGATGAATCGCTGTCTTTCTAGCAGGC
ACACCAGTTGTGCCACCGGTTGGCGTAGAAATCCGTGGTGGACCAATAGC
ATCAACAACTGTTCCAAAACGCTCGGCAACCGCTACCATTGTTCTGTAAA
GCGGTGTGCTAGTACCAATGCGAAATCGACCCAATCTCAAGCTTTTTCAA
TGAATCAAACAAGTGAAGCCGTTTTGAAGGGCACAGATGGTTGGCAACGC
CCAGATTCCGACAGAACCCTTCCAGCATCGTCGTTGAGCAGCAACAGACC
AGTCAGTTCACAACTTGTCCACGTGATTCAAAGTGTGCTATGCTATACAG
GCTTCCGGACGAAGAGGAAGTTTGCAGGGGTTGTGCTGTATCCACGGTAT
TCTTGCGAGATGGTGGCTATGGCGATTGCTTTTGGTTTATCATTGCCCCA
GAACAGTCTCAATGTCTCCTTCGCTGTGGTCGATCGCTTCACCTTGCATG
TGGTACATCTCCGCTTCTATCGACTCATCATCTTCGCAG
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Coding sequence (CDS) from alignment at ScGOVlb_3416:85..1273-

>Gvermi2365.t1 ID=Gvermi2365.t1|Name=Gvermi2365.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=1189bp|location=Sequence derived from alignment at ScGOVlb_3416:85..1273- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGCTCATGATCTTTCGAATCGAGAAGGTGGAATCATCTGTTGTGGTGAG
CAAAGGTGATGGGGAAACTATTGGAAACGATGAAGACGAGACGTCGACAG
CCTCGCCAAAACTGAACGAGGATGTTGAATCGGTAGTGGCGAACGATGTG
GTCCATCCTTCCATCGGAACCGAGAAAGTAAATCATTCTCATTCATCTTT
TACTGAGAATCTGTCCGAAAGTACCTCGGAAGTTTCGAAACCATCAAGCT
TCGTTGACTTGGCATCTCCCTTCCACACCATCGAATCACCGCTCGTGCTA
CAAACGCCGTTTGATGCAATCACTTCTTCATTTTCTTCAATCACCGATTC
TTCCAGTGCGACCATTACTGATTGGGGACCAGAAGGAAAAGATTCCAATT
CGTTGTGTTCTCGCATATCAGCAACCGCAACATCGAAGCTGTCCTTTCCG
CCAACAACAGGACAGAATCTCGTTGTTCTTCACAACGAATCAGAGAATGT
ACTATCGACTTCCGATCTTATGGACGAGTTTGACTCTGTGGTTTACTATC
AGACCTCCTTTGCTACAAATTCTCTGGAGATCACAACAGCGCATCGCTAC
GAAGGAACGCTGTCGTTGCAGAAATCATCGGACTTCGTGAATAGTCATCG
AACCGCGGATGACGCCAACGTGGTGATGAATCGCTGTCTTTCTAGCAGGC
ACACCAGTTGTGCCACCGGTTGGCGTAGAAATCCGTGGTGGACCAATAGC
ATCAACAACTGTTCCAAAACGCTCGGCAACCGCTACCATTGTTCTGTAAA
GCGGTGTGCTAGTACCAATGCGAAATCGACCCAATCTCAAGCTTTTTCAA
TGAATCAAACAAGTGAAGCCGTTTTGAAGGGCACAGATGGTTGGCAACGC
CCAGATTCCGACAGAACCCTTCCAGCATCGTCGTTGAGCAGCAACAGACC
AGTCAGTTCACAACTTGTCCACGTGATTCAAAGTGTGCTATGCTATACAG
GCTTCCGGACGAAGAGGAAGTTTGCAGGGGTTGTGCTGTATCCACGGTAT
TCTTGCGAGATGGTGGCTATGGCGATTGCTTTTGGTTTATCATTGCCCCA
GAACAGTCTCAATGTCTCCTTCGCTGTGGTCGATCGCTTCACCTTGCATG
TGGTACATCTCCGCTTCTATCGACTCATCATCTTCGCAG
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