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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 1173264.KI913949_gene2536 |
| Preferred name | glsF |
| PFAMs | GATase_2,GXGXG,Glu_syn_central,Glu_synthase |
| Max annot lvl | 1117|Cyanobacteria |
| KEGG rclass | RC00006,RC00010 |
| KEGG ko | ko:K00284 |
| KEGG Reaction | R00021,R10086 |
| KEGG Pathway | ko00630,ko00910,ko01120,map00630,map00910,map01120 |
| GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 |
| Evalue | 8.69e-175 |
| EggNOG OGs | COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,1G0XM@1117|Cyanobacteria,1H8GB@1150|Oscillatoriales |
| EC | 1.4.7.1 |
| Description | PFAM Conserved region in glutamate synthase |
| COG category | E |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi13678.t1 ID=Gvermi13678.t1|Name=Gvermi13678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=792bp MRCIAHNGEINTLLGNLNWTKSREPLFQDGLWKNYSEELVPITNLFNSDS ANLDSVVELLIQSGKDPEESLMILIPEAYHNQPSLNSSPEINDFYDFYAN LQEPWDGPALVVFSDGRKVGATLDRNGLRPARYCITSDGIITLSSEAGII DFSLDSILHKGRLGPGQMISVDLVNNIVLENLIIKKAVANKLPYGSWLSN NQVLIENQPYNIESESSYLSQLSRLHTAYGYSNEDVELVIEHMASSAKEP TFCMGDDIPLAVLSNKPHLVYDYFKQRFAQVTNPAIDPLRESLVMSLVTH IGPKGNYLEPTENMAKSITISSPIINEQELELINSSIFKVYSVNTFFDLD ASVTSFNSQINIICQQSVINIEEGAGIILLTDRSDKLTQNAIFIPPLLIV GALHHYLIARGLRHKVSIIVETGQCWNTHHFACLIGYGASAICPYLAFLT VRQWWHNTKTQKLMANVALDTIINQKGQDVVCVYVAIGQKASSVAQVVST LEEKGALEYTIIVAANADDPATLQYIAPYTGATLAEYFMYKGKATLVIYD DLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSALGSG SMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGI SVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFSQFASDLDKATQNQLA RGQRLREILKQAQNSPLAVEDQVAIIYAGVNGYLDNIELPKVSDFVLALR QDLKNSKPEFSESIRSTKKLTPESEDLLKQSIQDVQQTFVA* back to topspliced messenger RNA >Gvermi13678.t1 ID=Gvermi13678.t1|Name=Gvermi13678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2376bp|location=Sequence derived from alignment at ScGOVlb_59:104775..107457+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAGATGTATAGCACACAATGGTGAAATTAATACTCTTCTTGGTAATTT AAATTGGACCAAGTCTAGAGAACCTTTATTTCAAGATGGTTTATGGAAAA ACTATTCTGAGGAACTAGTTCCAATTACAAATCTATTTAATAGTGATTCT GCTAATTTAGATTCCGTTGTGGAGCTATTAATTCAGTCTGGTAAAGATCC TGAAGAATCACTAATGATTCTTATTCCTGAGGCATATCATAATCAGCCAT CATTAAATTCAAGTCCTGAGATCAATGATTTTTATGATTTTTATGCTAAT TTACAAGAGCCTTGGGATGGTCCTGCCCTAGTTGTATTTAGTGATGGTAG AAAAGTAGGTGCAACTTTAGATAGAAATGGATTGAGACCTGCTAGGTATT GTATTACTTCGGATGGTATCATTACCCTATCATCTGAGGCAGGCATTATA GATTTTAGTTTGGATAGTATTTTACATAAGGGGCGTTTGGGTCCTGGTCA AATGATTTCTGTTGATTTAGTTAATAATATAGTCTTAGAAAATTTAATTA TTAAAAAAGCTGTTGCTAATAAACTACCTTATGGTTCTTGGCTGTCTAAT AACCAAGTATTAATTGAAAATCAACCATATAATATAGAAAGTGAGTCCAG TTATCTCAGTCAATTATCTCGTTTACACACTGCTTATGGTTACTCTAATG AAGATGTGGAGTTAGTTATAGAGCATATGGCAAGTTCTGCTAAAGAGCCA ACTTTTTGTATGGGTGACGATATTCCTTTAGCTGTTTTATCTAATAAGCC ACATCTGGTTTATGATTATTTTAAACAAAGGTTTGCACAGGTGACTAATC CTGCTATTGATCCTTTGCGTGAAAGTTTAGTTATGTCATTGGTTACTCAT ATCGGTCCTAAGGGTAATTATCTAGAACCCACTGAAAATATGGCTAAGTC AATTACTATTAGTTCGCCTATTATTAACGAACAAGAATTGGAACTTATAA ATAGTAGTATATTTAAAGTTTATTCTGTTAACACTTTTTTTGACTTAGAT GCTTCAGTTACGAGTTTTAATAGTCAAATTAATATCATTTGTCAACAATC TGTTATTAATATAGAAGAAGGAGCAGGTATAATTTTATTAACAGATCGCT CAGATAAACTAACTCAAAATGCCATTTTTATACCTCCCCTTTTAATTGTA GGAGCTCTACATCATTACCTTATTGCAAGAGGTTTAAGGCATAAGGTTTC TATTATTGTTGAGACTGGTCAATGTTGGAATACACATCATTTTGCTTGTC TTATAGGCTATGGTGCTAGTGCTATTTGCCCTTATTTAGCTTTTTTAACT GTACGTCAATGGTGGCATAATACAAAAACCCAAAAATTAATGGCTAATGT TGCACTAGACACTATAATAAATCAGAAAGGTCAAGATGTAGTTTGTGTTT ATGTTGCTATAGGTCAAAAAGCTTCATCTGTTGCACAAGTAGTATCTACA TTAGAAGAAAAAGGAGCCTTGGAATATACTATAATAGTTGCTGCAAACGC CGACGATCCAgcaactcttcaatatatagcaccctatactggtgctacat tagcagagtattttatgtacaaaggtaaagcaactttggtaatttatgat gatttaactaaacaagctcaagcttaccgtcaaatgtcacttcttctacg tcgtccaccaggtagagaagcctatcctggcgatgttttttatttgcact ctagattgttagaaagagctgctaaattaagtagtgcacttggttcaggt agtatgactgctttgccaattattgaaacacaagctggtgatgtatctgc ttatattccaacaaatgtaatttctattactgacggtcagatctttttat ctggtgatttatttaactcaggaattagacctgctataaatgttggtatt tctgtatcaagagtgggttctgctgctcaaattaaagcaatgaaacaagt tgctggtaagttgaagttagaactagCACAATTTGCAGAATTAGAGGCAT TTTCACAATTTGCTTCTGATCTAGATAAAGCAACTCAAAACCAACTTGCC CGTGGACAAAGACTTAGGGAAATATTAAAACAAGCACAAAATTCCCCATT AGCAGTTGAAGATCAAGTTGCTATTATATATGCTGGTGTTAATGGATATT TAGATAATATTGAGTTACCAAAAGTAAGCGATTTTGTTTTAGCTCTAAGG CAGGATTTAAAAAATTCTAAGCCTGAATTTAGTGAAAGTATTCGCAGTAC TAAAAAATTAACACCGGAATCAGAAGATTTACTGAAACAATCAATACAAG ATGTACAGCAAACTTTTGTTGCTTAA back to topprotein sequence of Gvermi13678.t1 >Gvermi13678.t1 ID=Gvermi13678.t1|Name=Gvermi13678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=792bp
MRCIAHNGEINTLLGNLNWTKSREPLFQDGLWKNYSEELVPITNLFNSDS ANLDSVVELLIQSGKDPEESLMILIPEAYHNQPSLNSSPEINDFYDFYAN LQEPWDGPALVVFSDGRKVGATLDRNGLRPARYCITSDGIITLSSEAGII DFSLDSILHKGRLGPGQMISVDLVNNIVLENLIIKKAVANKLPYGSWLSN NQVLIENQPYNIESESSYLSQLSRLHTAYGYSNEDVELVIEHMASSAKEP TFCMGDDIPLAVLSNKPHLVYDYFKQRFAQVTNPAIDPLRESLVMSLVTH IGPKGNYLEPTENMAKSITISSPIINEQELELINSSIFKVYSVNTFFDLD ASVTSFNSQINIICQQSVINIEEGAGIILLTDRSDKLTQNAIFIPPLLIV GALHHYLIARGLRHKVSIIVETGQCWNTHHFACLIGYGASAICPYLAFLT VRQWWHNTKTQKLMANVALDTIINQKGQDVVCVYVAIGQKASSVAQVVST LEEKGALEYTIIVAANADDPATLQYIAPYTGATLAEYFMYKGKATLVIYD DLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSALGSG SMTALPIIETQAGDVSAYIPTNVISITDGQIFLSGDLFNSGIRPAINVGI SVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFSQFASDLDKATQNQLA RGQRLREILKQAQNSPLAVEDQVAIIYAGVNGYLDNIELPKVSDFVLALR QDLKNSKPEFSESIRSTKKLTPESEDLLKQSIQDVQQTFVA* back to topmRNA from alignment at ScGOVlb_59:104775..107457+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi13678.t1 ID=Gvermi13678.t1|Name=Gvermi13678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2683bp|location=Sequence derived from alignment at ScGOVlb_59:104775..107457+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGAGATGTATAGCACACAATGGTGAAATTAATACTCTTCTTGGTAATTT
AAATTGGACCAAGTCTAGAGAACCTTTATTTCAAGATGGTTTATGGAAAA
ACTATTCTGAGGAACTAGTTCCAATTACAAATCTATTTAATAGTGATTCT
GCTAATTTAGATTCCGTTGTGGAGCTATTAATTCAGTCTGGTAAAGATCC
TGAAGAATCACTAATGATTCTTATTCCTGAGGCATATCATAATCAGCCAT
CATTAAATTCAAGTCCTGAGATCAATGATTTTTATGATTTTTATGCTAAT
TTACAAGAGCCTTGGGATGGTCCTGCCCTAGTTGTATTTAGTGATGGTAG
AAAAGTAGGTGCAACTTTAGATAGAAATGGATTGAGACCTGCTAGGTATT
GTATTACTTCGGATGGTATCATTACCCTATCATCTGAGGCAGGCATTATA
GATTTTAGTTTGGATAGTATTTTACATAAGGGGCGTTTGGGTCCTGGTCA
AATGATTTCTGTTGATTTAGTTAATAATATAGTCTTAGAAAATTTAATTA
TTAAAAAAGCTGTTGCTAATAAACTACCTTATGGTTCTTGGCTGTCTAAT
AACCAAGTATTAATTGAAAATCAACCATATAATATAGAAAGTGAGTCCAG
TTATCTCAGTCAATTATCTCGTTTACACACTGCTTATGGTTACTCTAATG
AAGATGTGGAGTTAGTTATAGAGCATATGGCAAGTTCTGCTAAAGAGCCA
ACTTTTTGTATGGGTGACGATATTCCTTTAGCTGTTTTATCTAATAAGCC
ACATCTGGTTTATGATTATTTTAAACAAAGGTTTGCACAGGTGACTAATC
CTGCTATTGATCCTTTGCGTGAAAGTTTAGTTATGTCATTGGTTACTCAT
ATCGGTCCTAAGGGTAATTATCTAGAACCCACTGAAAATATGGCTAAGTC
AATTACTATTAGTTCGCCTATTATTAACGAACAAGAATTGGAACTTATAA
ATAGTAGTATATTTAAAGTTTATTCTGTTAACACTTTTTTTGACTTAGAT
GCTTCAGTTACGAGTTTTAATAGTCAAATTAATATCATTTGTCAACAATC
TGTTATTAATATAGAAGAAGGAGCAGGTATAATTTTATTAACAGATCGCT
CAGATAAACTAACTCAAAATGCCATTTTTATACCTCCCCTTTTAATTGTA
GGAGCTCTACATCATTACCTTATTGCAAGAGGTTTAAGGCATAAGGTTTC
TATTATTGTTGAGACTGGTCAATGTTGGAATACACATCATTTTGCTTGTC
TTATAGGCTATGGTGCTAGTGCTATTTGCCCTTATTTAGCTTTTTTAACT
GTACGTCAATGGTGGCATAATACAAAAACCCAAAAATTAATGGCTAATGG
TAAGTTGCCTAAAATGAGTATTCAAGATGCTCAAGCTAATTATCGTAATG
CTATAGAAAAAGGTATTCTGAAGATATTATCTAAAATAGGTATCTGTTTA
ATTTCGAGTTATCATGGTGCACAAATTTTTGAAATATTAGGTTTAGGTAA
TGATATTGTAGATTTATGTTTTCTTAATACTACTTCTAGGCTTTCTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA
CTTCAGTTGCACTAGACACTATAATAAATCAGAAAGGTCAAGATGTAGTT
TGTGTTTATGTTGCTATAGGTCAAAAAGCTTCATCTGTTGCACAAGTAGT
ATCTACATTAGAAGAAAAAGGAGCCTTGGAATATACTATAATAGTTGCTG
CAAACGCCGACGATCCAgcaactcttcaatatatagcaccctatactggt
gctacattagcagagtattttatgtacaaaggtaaagcaactttggtaat
ttatgatgatttaactaaacaagctcaagcttaccgtcaaatgtcacttc
ttctacgtcgtccaccaggtagagaagcctatcctggcgatgttttttat
ttgcactctagattgttagaaagagctgctaaattaagtagtgcacttgg
ttcaggtagtatgactgctttgccaattattgaaacacaagctggtgatg
tatctgcttatattccaacaaatgtaatttctattactgacggtcagatc
tttttatctggtgatttatttaactcaggaattagacctgctataaatgt
tggtatttctgtatcaagagtgggttctgctgctcaaattaaagcaatga
aacaagttgctggtaagttgaagttagaactagCACAATTTGCAGAATTA
GAGGCATTTTCACAATTTGCTTCTGATCTAGATAAAGCAACTCAAAACCA
ACTTGCCCGTGGACAAAGACTTAGGGAAATATTAAAACAAGCACAAAATT
CCCCATTAGCAGTTGAAGATCAAGTTGCTATTATATATGCTGGTGTTAAT
GGATATTTAGATAATATTGAGTTACCAAAAGTAAGCGATTTTGTTTTAGC
TCTAAGGCAGGATTTAAAAAATTCTAAGCCTGAATTTAGTGAAAGTATTC
GCAGTACTAAAAAATTAACACCGGAATCAGAAGATTTACTGAAACAATCA
ATACAAGATGTACAGCAAACTTTTGTTGCTTAA back to topCoding sequence (CDS) from alignment at ScGOVlb_59:104775..107457+ >Gvermi13678.t1 ID=Gvermi13678.t1|Name=Gvermi13678.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2376bp|location=Sequence derived from alignment at ScGOVlb_59:104775..107457+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGAGATGTATAGCACACAATGGTGAAATTAATACTCTTCTTGGTAATTT AAATTGGACCAAGTCTAGAGAACCTTTATTTCAAGATGGTTTATGGAAAA ACTATTCTGAGGAACTAGTTCCAATTACAAATCTATTTAATAGTGATTCT GCTAATTTAGATTCCGTTGTGGAGCTATTAATTCAGTCTGGTAAAGATCC TGAAGAATCACTAATGATTCTTATTCCTGAGGCATATCATAATCAGCCAT CATTAAATTCAAGTCCTGAGATCAATGATTTTTATGATTTTTATGCTAAT TTACAAGAGCCTTGGGATGGTCCTGCCCTAGTTGTATTTAGTGATGGTAG AAAAGTAGGTGCAACTTTAGATAGAAATGGATTGAGACCTGCTAGGTATT GTATTACTTCGGATGGTATCATTACCCTATCATCTGAGGCAGGCATTATA GATTTTAGTTTGGATAGTATTTTACATAAGGGGCGTTTGGGTCCTGGTCA AATGATTTCTGTTGATTTAGTTAATAATATAGTCTTAGAAAATTTAATTA TTAAAAAAGCTGTTGCTAATAAACTACCTTATGGTTCTTGGCTGTCTAAT AACCAAGTATTAATTGAAAATCAACCATATAATATAGAAAGTGAGTCCAG TTATCTCAGTCAATTATCTCGTTTACACACTGCTTATGGTTACTCTAATG AAGATGTGGAGTTAGTTATAGAGCATATGGCAAGTTCTGCTAAAGAGCCA ACTTTTTGTATGGGTGACGATATTCCTTTAGCTGTTTTATCTAATAAGCC ACATCTGGTTTATGATTATTTTAAACAAAGGTTTGCACAGGTGACTAATC CTGCTATTGATCCTTTGCGTGAAAGTTTAGTTATGTCATTGGTTACTCAT ATCGGTCCTAAGGGTAATTATCTAGAACCCACTGAAAATATGGCTAAGTC AATTACTATTAGTTCGCCTATTATTAACGAACAAGAATTGGAACTTATAA ATAGTAGTATATTTAAAGTTTATTCTGTTAACACTTTTTTTGACTTAGAT GCTTCAGTTACGAGTTTTAATAGTCAAATTAATATCATTTGTCAACAATC TGTTATTAATATAGAAGAAGGAGCAGGTATAATTTTATTAACAGATCGCT CAGATAAACTAACTCAAAATGCCATTTTTATACCTCCCCTTTTAATTGTA GGAGCTCTACATCATTACCTTATTGCAAGAGGTTTAAGGCATAAGGTTTC TATTATTGTTGAGACTGGTCAATGTTGGAATACACATCATTTTGCTTGTC TTATAGGCTATGGTGCTAGTGCTATTTGCCCTTATTTAGCTTTTTTAACT GTACGTCAATGGTGGCATAATACAAAAACCCAAAAATTAATGGCTAATGT TGCACTAGACACTATAATAAATCAGAAAGGTCAAGATGTAGTTTGTGTTT ATGTTGCTATAGGTCAAAAAGCTTCATCTGTTGCACAAGTAGTATCTACA TTAGAAGAAAAAGGAGCCTTGGAATATACTATAATAGTTGCTGCAAACGC CGACGATCCAgcaactcttcaatatatagcaccctatactggtgctacat tagcagagtattttatgtacaaaggtaaagcaactttggtaatttatgat gatttaactaaacaagctcaagcttaccgtcaaatgtcacttcttctacg tcgtccaccaggtagagaagcctatcctggcgatgttttttatttgcact ctagattgttagaaagagctgctaaattaagtagtgcacttggttcaggt agtatgactgctttgccaattattgaaacacaagctggtgatgtatctgc ttatattccaacaaatgtaatttctattactgacggtcagatctttttat ctggtgatttatttaactcaggaattagacctgctataaatgttggtatt tctgtatcaagagtgggttctgctgctcaaattaaagcaatgaaacaagt tgctggtaagttgaagttagaactagCACAATTTGCAGAATTAGAGGCAT TTTCACAATTTGCTTCTGATCTAGATAAAGCAACTCAAAACCAACTTGCC CGTGGACAAAGACTTAGGGAAATATTAAAACAAGCACAAAATTCCCCATT AGCAGTTGAAGATCAAGTTGCTATTATATATGCTGGTGTTAATGGATATT TAGATAATATTGAGTTACCAAAAGTAAGCGATTTTGTTTTAGCTCTAAGG CAGGATTTAAAAAATTCTAAGCCTGAATTTAGTGAAAGTATTCGCAGTAC TAAAAAATTAACACCGGAATCAGAAGATTTACTGAAACAATCAATACAAG ATGTACAGCAAACTTTTGTTGCTTAA back to top
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