Gvermi13577.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi13577.t1
Unique NameGvermi13577.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length7
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_9363contigScGOVlb_9363:290..376 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13577Gvermi13577Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_9363 290..376 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi13577.t1Gvermi13577.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_9363 290..376 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi13577.t1.CDS1Gvermi13577.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_9363 290..300 +
Gvermi13577.t1.CDS2Gvermi13577.t1.CDS2Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_9363 367..376 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi13577.t1.exon1Gvermi13577.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_9363 290..300 +
Gvermi13577.t1.exon2Gvermi13577.t1.exon2Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_9363 367..376 +


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi13577.t1.intron1Gvermi13577.t1.intron1Gracilaria vermiculophylla HapMaleFtJ_2017 maleintronScGOVlb_9363 301..366 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi13577.t1.stop1Gvermi13577.t1.stop1Gracilaria vermiculophylla HapMaleFtJ_2017 malestop_codonScGOVlb_9363 374..376 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi13577.t1 ID=Gvermi13577.t1|Name=Gvermi13577.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=7bp
VEIIRI*
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spliced messenger RNA

>Gvermi13577.t1 ID=Gvermi13577.t1|Name=Gvermi13577.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=21bp|location=Sequence derived from alignment at ScGOVlb_9363:290..376+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
gtggagattatacggatatga
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protein sequence of Gvermi13577.t1

>Gvermi13577.t1 ID=Gvermi13577.t1|Name=Gvermi13577.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=7bp
VEIIRI*
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mRNA from alignment at ScGOVlb_9363:290..376+

Legend: polypeptideCDSexonintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi13577.t1 ID=Gvermi13577.t1|Name=Gvermi13577.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=87bp|location=Sequence derived from alignment at ScGOVlb_9363:290..376+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
gtggagattatgtacgttttcgatgcgcgcttaccagctctgcacaaggg
aaagaactaccggcaccaagcgaaaagacggatatga
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Coding sequence (CDS) from alignment at ScGOVlb_9363:290..376+

>Gvermi13577.t1 ID=Gvermi13577.t1|Name=Gvermi13577.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=21bp|location=Sequence derived from alignment at ScGOVlb_9363:290..376+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
gtggagattatacggatatga
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