Gvermi13337.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGvermi13337.t1
Unique NameGvermi13337.t1
TypemRNA
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length142
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_9159contigScGOVlb_9159:2..425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13337Gvermi13337Gracilaria vermiculophylla HapMaleFtJ_2017 malegeneScGOVlb_9159 2..425 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi13337.t1.CDS1Gvermi13337.t1.CDS1Gracilaria vermiculophylla HapMaleFtJ_2017 maleCDSScGOVlb_9159 2..425 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi13337.t1.exon1Gvermi13337.t1.exon1Gracilaria vermiculophylla HapMaleFtJ_2017 maleexonScGOVlb_9159 2..425 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gvermi13337.t1Gvermi13337.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malepolypeptideScGOVlb_9159 2..425 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gvermi13337.t1 ID=Gvermi13337.t1|Name=Gvermi13337.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=142bp
XLEQQRKKQCKALEKARSENRELEANNRALLDKIKGLEVDVDRLLEARKI
GAVESLRAMHKAEMAELVAKQSSVRCTMFHQQLRDAEASSHIVHEHVDEL
ERVLDEMRSLLTSNANVSEDSGSRTLHNPLESLVHKGSKLLG
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spliced messenger RNA

>Gvermi13337.t1 ID=Gvermi13337.t1|Name=Gvermi13337.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=424bp|location=Sequence derived from alignment at ScGOVlb_9159:2..425+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
AACTCGAACAGCAGCGCAAGAAGCAGTGCAAGGCGCTGGAGAAAGCCAGA
AGCGAGAACAGAGAACTGGAAGCCAATAACAGGGCTCTGTTGGACAAGAT
CAAAGGGCTAGAAGTTGATGTCGACCGTCTCCTGGAAGCTCGCAAAATCG
GCGCTGTGGAATCACTGCGTGCGATGCACAAGGCCGAAATGGCGGAACTA
GTGGCGAAGCAGTCCTCTGTGCGATGCACGATGTTCCACCAGCAGCTGAG
AGATGCCGAAGCCTCGTCACACATTGTACACGAACACGTGGACGAGCTGG
AACGGGTGCTCGACGAAATGAGGAGCTTGCTCACCAGCAATGCAAACGTG
TCAGAAGATTCCGGCAGTCGCACACTGCACAATCCCCTGGAATCACTCGT
ACACAAGGGGTCCAAGCTGTTGGG
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protein sequence of Gvermi13337.t1

>Gvermi13337.t1 ID=Gvermi13337.t1|Name=Gvermi13337.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=142bp
XLEQQRKKQCKALEKARSENRELEANNRALLDKIKGLEVDVDRLLEARKI
GAVESLRAMHKAEMAELVAKQSSVRCTMFHQQLRDAEASSHIVHEHVDEL
ERVLDEMRSLLTSNANVSEDSGSRTLHNPLESLVHKGSKLLG
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mRNA from alignment at ScGOVlb_9159:2..425+

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gvermi13337.t1 ID=Gvermi13337.t1|Name=Gvermi13337.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=424bp|location=Sequence derived from alignment at ScGOVlb_9159:2..425+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
AACTCGAACAGCAGCGCAAGAAGCAGTGCAAGGCGCTGGAGAAAGCCAGA
AGCGAGAACAGAGAACTGGAAGCCAATAACAGGGCTCTGTTGGACAAGAT
CAAAGGGCTAGAAGTTGATGTCGACCGTCTCCTGGAAGCTCGCAAAATCG
GCGCTGTGGAATCACTGCGTGCGATGCACAAGGCCGAAATGGCGGAACTA
GTGGCGAAGCAGTCCTCTGTGCGATGCACGATGTTCCACCAGCAGCTGAG
AGATGCCGAAGCCTCGTCACACATTGTACACGAACACGTGGACGAGCTGG
AACGGGTGCTCGACGAAATGAGGAGCTTGCTCACCAGCAATGCAAACGTG
TCAGAAGATTCCGGCAGTCGCACACTGCACAATCCCCTGGAATCACTCGT
ACACAAGGGGTCCAAGCTGTTGGG
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Coding sequence (CDS) from alignment at ScGOVlb_9159:2..425+

>Gvermi13337.t1 ID=Gvermi13337.t1|Name=Gvermi13337.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=424bp|location=Sequence derived from alignment at ScGOVlb_9159:2..425+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
AACTCGAACAGCAGCGCAAGAAGCAGTGCAAGGCGCTGGAGAAAGCCAGA
AGCGAGAACAGAGAACTGGAAGCCAATAACAGGGCTCTGTTGGACAAGAT
CAAAGGGCTAGAAGTTGATGTCGACCGTCTCCTGGAAGCTCGCAAAATCG
GCGCTGTGGAATCACTGCGTGCGATGCACAAGGCCGAAATGGCGGAACTA
GTGGCGAAGCAGTCCTCTGTGCGATGCACGATGTTCCACCAGCAGCTGAG
AGATGCCGAAGCCTCGTCACACATTGTACACGAACACGTGGACGAGCTGG
AACGGGTGCTCGACGAAATGAGGAGCTTGCTCACCAGCAATGCAAACGTG
TCAGAAGATTCCGGCAGTCGCACACTGCACAATCCCCTGGAATCACTCGT
ACACAAGGGGTCCAAGCTGTTGGG
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