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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12919.t2 ID=Gvermi12919.t2|Name=Gvermi12919.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=766bp MFHNSALRVFQARVEARLPSVLIFYRGERSFFCKQWLRRWLSIRGLSPRL RQLSAALIFVSSQSQGKAFSVADQLATNRPDLRDLIFFFGDPENALAHFL RRNAIPAPVITNPDVHRAHGWLFEHGMVQPAVLATFEHAVLYQWCSRPSF LNGAGKLDRPDPWHIWDAIEFEMERLIKAHAVPPPAHTPPHCPSQISHTS ARIAAAPSTSATADIPQSPVLSELKSTDSSPASHRTRLSSRPIHVVEAKM LRTPPAHRTRTCTEHSSSPEQLAATIRSLSSTVNPPLCDARKPHTHTDAS DVIRLPHILQHVFSSPTNVNLESTPPQSAQPNELHLQSSSWYDRPDTELN ASQGKLHQFSAECTSSSDATAWDRLQLLGRLHGSQSSLQSSTSSDHRSSE PQLTSAEKHHAKLRAYTLSDEYASSDMDAVSAKDVREGHESDEHQYSQLV ARVSAAERQSANRSFRSLLNAESQGPSSSDLREPLEGSNTSLGSDMVDSF VRKVRSVRTSDSTLMTHFREGISFPSIRIDEEGDGMEAGMFDILKELSDH VNVQERKESNKCLKDKCARPANYVADVRAENGTRSLERKLSAEPAPLTTS SLRNVPRVGFRNYSDAFMTDPLPVRRDRTTKGIVPAVGAAELNSENVGSL VSDDVAAAFKMYDSRSEMTPYAPSLQSDLSSDAKGPVVDVDSPPRWDERR AGSHIHDEYEAYDELVVAEYQVEERVEEEHSGLFGARAVNTPACQAQLCA LAEHESRQRKCLILL* back to topspliced messenger RNA >Gvermi12919.t2 ID=Gvermi12919.t2|Name=Gvermi12919.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2298bp|location=Sequence derived from alignment at ScGOVlb_425:2082453..2085928- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTCACAACTCCGCGCTGCGCGTCTTCCAGGCGCGCGTCGAGGCGCG CCTCCCCTCCGTCCTCATCTTCTACCGCGGCGAGCGCTCCTTCTTCTGTA AACAGTGGCTGCGCAGATGGTTGTCGATCCGCGGCCTGTCGCCGCGCCTG CGCCAGCTCAGCGCCGCCCTCATTTTCGTCAGCTCTCAGAGCCAGGGGAA GGCGTTCAGCGTAGCTGATCAGCTCGCCACAAACCGCCCCGATCTCCGCG ACCTCATCTTCTTCTTCGGCGACCCCGAAAACGCCCTCGCCCACTTCCTG CGCCGCAACGCCATCCCGGCCCCGGTCATCACCAACCCCGACGTCCACCG CGCCCACGGCTGGCTCTTCGAGCACGGCATGGTGCAGCCCGCCGTGCTCG CCACCTTCGAACACGCTGTACTCTACCAATGGTGCAGCCGCCCCTCCTTC CTCAACGGCGCCGGCAAGCTGGACCGCCCGGACCCGTGGCACATCTGGGA CGCCATCGAGTTCGAGATGGAGCGCCTCATCAAGGCGCACGCCGTTCCCC CCCCCGCCCACACCCCCCCGCACTGCCCGTCCCAGATCTCCCACACCTCC GCCCGCATCGCCGCCGCGCCCTCCACGTCCGCCACCGCCGACATCCCGCA ATCCCCCGTGCTCTCGGAGCTCAAGTCCACCGACAGCTCCCCCGCCTCGC ACCGCACCCGCCTCTCGTCGCGCCCAATTCACGTCGTCGAGGCCAAGATG CTCCGCACGCCCCCCGCCCACCGCACCCGCACCTGCACCGAACACAGCTC CTCCCCCGAGCAGCTGGCCGCCACCATACGCTCCTTGTCGTCAACTGTAA ACCCCCCCCTGTGCGACGCCCGCAAACCGCACACGCACACCGATGCAAGC GACGTGATTCGTTTACCACACATTCTGCAACACGTTTTTTCGTCGCCCAC AAACGTCAACCTCGAGTCCACGCCGCCGCAAAGTGCGCAGCCCAACGAAC TCCACCTCCAGTCCTCCTCGTGGTACGACCGCCCCGACACCGAGCTGAAT GCGTCGCAGGGCAAGCTGCACCAGTTCAGCGCCGAATGCACGTCCTCGTC CGACGCCACCGCCTGGGATCGCCTCCAACTGCTGGGCCGCCTGCACGGCT CACAGTCCTCGCTGCAGAGCAGCACCTCATCCGACCACAGGTCCTCGGAG CCGCAGCTCACCAGCGCTGAAAAGCACCACGCCAAACTGCGCGCCTACAC GCTCAGTGACGAGTACGCCTCGTCGGACATGGACGCCGTGTCGGCCAAGG ACGTGAGGGAGGGTCATGAAAGCGATGAACACCAGTACTCTCAACTGGTG GCGCGCGTGAGTGCTGCGGAGCGCCAAAGCGCAAATCGTAGCTTTCGCAG CCTTCTCAACGCCGAGTCGCAGGGCCCGTCCTCGTCGGACCTGCGCGAAC CTCTGGAAGGCAGCAACACGTCGCTTGGCTCCGACATGGTGGATTCATTT GTACGCAAGGTGCGTTCCGTGCGAACGTCCGACTCCACGCTGATGACGCA CTTCCGCGAGGGCATCTCGTTCCCGTCCATTCGAATCGACGAAGAAGGCG ACGGGATGGAGGCGGGCATGTTTGACATTCTCAAGGAACTGTCGGACCAT GTCAACGTGCAGGAGAGAAAAGAGAGTAACAAGTGCTTGAAAGACAAGTG TGCGCGGCCAGCCAATTACGTTGCGGACGTGAGAGCGGAAAACGGCACCC GCTCCCTTGAACGAAAGCTGAGCGCTGAGCCGGCGCCGCTGACGACGAGC TCGCTGAGAAATGTGCCCAGGGTTGGCTTCCGCAACTACTCGGACGCATT CATGACGGACCCGCTGCCGGTGAGAAGGGACCGCACGACGAAGGGGATTG TTCCAGCGGTGGGGGCGGCGGAGCTGAACTCCGAAAACGTTGGCTCGCTT GTGTCCGACGACGTTGCAGCCGCTTTCAAGATGTATGACAGTCGGAGCGA AATGACGCCGTACGCGCCATCGCTGCAATCGGACTTGAGTTCGGACGCCA AGGGGCCGGTGGTTGACGTGGACTCGCCGCCGAGATGGGATGAGCGGCGC GCGGGCAGCCACATTCACGACGAATACGAGGCGTACGACGAATTGGTTGT GGCGGAGTACCAGGTGGAAGAACGGGTGGAGGAGGAGCACTCGGGGCTCT TTGGCGCCCGGGCTGTGAACACTCCCGCATGTCAAGCTCAACTATGCGCA CTCGCCGAGCACGAATCGAGGCAACGCAAGTGTTTGATTTTGCTGTAG back to topprotein sequence of Gvermi12919.t2 >Gvermi12919.t2 ID=Gvermi12919.t2|Name=Gvermi12919.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=766bp
MFHNSALRVFQARVEARLPSVLIFYRGERSFFCKQWLRRWLSIRGLSPRL RQLSAALIFVSSQSQGKAFSVADQLATNRPDLRDLIFFFGDPENALAHFL RRNAIPAPVITNPDVHRAHGWLFEHGMVQPAVLATFEHAVLYQWCSRPSF LNGAGKLDRPDPWHIWDAIEFEMERLIKAHAVPPPAHTPPHCPSQISHTS ARIAAAPSTSATADIPQSPVLSELKSTDSSPASHRTRLSSRPIHVVEAKM LRTPPAHRTRTCTEHSSSPEQLAATIRSLSSTVNPPLCDARKPHTHTDAS DVIRLPHILQHVFSSPTNVNLESTPPQSAQPNELHLQSSSWYDRPDTELN ASQGKLHQFSAECTSSSDATAWDRLQLLGRLHGSQSSLQSSTSSDHRSSE PQLTSAEKHHAKLRAYTLSDEYASSDMDAVSAKDVREGHESDEHQYSQLV ARVSAAERQSANRSFRSLLNAESQGPSSSDLREPLEGSNTSLGSDMVDSF VRKVRSVRTSDSTLMTHFREGISFPSIRIDEEGDGMEAGMFDILKELSDH VNVQERKESNKCLKDKCARPANYVADVRAENGTRSLERKLSAEPAPLTTS SLRNVPRVGFRNYSDAFMTDPLPVRRDRTTKGIVPAVGAAELNSENVGSL VSDDVAAAFKMYDSRSEMTPYAPSLQSDLSSDAKGPVVDVDSPPRWDERR AGSHIHDEYEAYDELVVAEYQVEERVEEEHSGLFGARAVNTPACQAQLCA LAEHESRQRKCLILL* back to topmRNA from alignment at ScGOVlb_425:2082453..2085928- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12919.t2 ID=Gvermi12919.t2|Name=Gvermi12919.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=3476bp|location=Sequence derived from alignment at ScGOVlb_425:2082453..2085928- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTTTCACAACTCCGCGCTGCGCGTCTTCCAGGCGCGCGTCGAGGCGCG
CCTCCCCTCCGTCCTCATCTTCTACCGCGGCGAGCGCTCCTTCTTCTGTA
AACAGTGGCTGCGCAGATGGTTGTCGATCCGCGGCCTGTCGCCGCGCCTG
CGCCAGCTCAGCGCCGCCCTCATTTTCGTCAGCTCTCAGAGCCAGGGGAA
GGCGTTCAGCGTAGCTGATCAGCTCGCCACAAACCGCCCCGATCTCCGCG
ACCTCATCTTCTTCTTCGGCGACCCCGAAAACGCCCTCGCCCACTTCCTG
CGCCGCAACGCCATCCCGGCCCCGGTCATCACCAACCCCGACGTCCACCG
CGCCCACGGCTGGCTCTTCGAGCACGGCATGGTGCAGCCCGCCGTGCTCG
CCACCTTCGAACACGCTGTACTCTACCAATGGTGCAGCCGCCCCTCCTTC
CTCAACGGCGCCGGCAAGCTGGACCGCCCGGACCCGTGGCACATCTGGGA
CGCCATCGAGTTCGAGATGGAGCGCCTCATCAAGGCGCACGCCGTTCCCC
CCCCCGCCCACACCCCCCCGCACTGCCCGTCCCAGATCTCCCACACCTCC
GCCCGCATCGCCGCCGCGCCCTCCACGTCCGCCACCGCCGACATCCCGCA
ATCCCCCGTGCTCTCGGAGCTCAAGTCCACCGACAGCTCCCCCGCCTCGC
ACCGCACCCGCCTCTCGTCGCGCCCAATTCACGTCGTCGAGGCCAAGATG
CTCCGCACGCCCCCCGCCCACCGCACCCGCACCTGCACCGAACACAGCTC
CTCCCCCGAGCAGCTGGCCGCCACCATACGCTCCTTGTCGTCAACTGTAA
ACCCCCCCCTGTGCGACGCCCGCAAACCGCACACGCACACCGATGCAAGC
GACGTGATTCGTTTACCACACATTCTGCAACACGTTTTTTCGTCGCCCAC
AAACGTCAACCTCGAGTCCACGCCGCCGCAAAGTGCGCAGCCCAACGAAC
TCCACCTCCAGTCCTCCTCGTGGTACGACCGCCCCGACACCGAGCTGAAT
GCGTCGCAGGGCAAGCTGCACCAGTTCAGCGCCGAATGCACGTCCTCGTC
CGACGCCACCGCCTGGGATCGCCTCCAACTGCTGGGCCGCCTGCACGGCT
CACAGTCCTCGCTGCAGAGCAGCACCTCATCCGACCACAGGTCCTCGGAG
CCGCAGCTCACCAGCGCTGAAAAGCACCACGCCAAACTGCGCGCCTACAC
GCTCAGTGACGAGTACGCCTCGTCGGACATGGACGCCGTGTCGGCCAAGG
ACGTGAGGGAGGGTCATGAAAGCGATGAACACCAGTACTCTCAACTGGTG
GCGCGCGTGAGTGCTGCGGAGCGCCAAAGCGCAAATCGTAGCTTTCGCAG
CCTTCTCAACGCCGAGTCGCAGGGCCCGTCCTCGTCGGACCTGCGCGAAC
CTCTGGAAGGCAGCAACACGTCGCTTGGCTCCGACATGGTGGATTCATTT
GTACGCAAGGTGCGTTCCGTGCGAACGTCCGACTCCACGCTGATGACGCA
CTTCCGCGAGGGCATCTCGTTCCCGTCCATTCGAATCGACGAAGAAGGCG
ACGGGATGGAGGCGGGCATGTTTGACATTCTCAAGGAACTGTCGGACCAT
GTCAACGTGCAGGAGAGAAAAGAGAGTAACAAGTGCTTGAAAGACAAGTG
TGCGCGGCCAGCCAATTACGTTGCGGACGTGAGAGCGGAAAACGGCACCC
GCTCCCTTGAACGAAAGCTGAGCGCTGAGCCGGCGCCGCTGACGACGAGC
TCGCTGAGAAATGTGCCCAGGGTTGGCTTCCGCAACTACTCGGACGCATT
CATGACGGACCCGCTGCCGGTGAGAAGGGACCGCACGACGAAGGGGATTG
TTCCAGCGGTGGGGGCGGCGGAGCTGAACTCCGAAAACGTTGGCTCGCTT
GTGTCCGACGACGTTGCAGCCGCTTTCAAGATGTATGACAGTCGGAGCGA
AATGACGCCGTACGCGCCATCGCTGCAATCGGACTTGAGTTCGGACGCCA
AGGGGCCGGTGGTTGACGTGGACTCGCCGCCGAGATGGGATGAGCGGCGC
GCGGGCAGCCACATTCACGACGAATACGAGGCGTACGACGAATTGGTTGT
GGCGGAGTACCAGGTGGAAGAACGGGTGGAGGAGGAGCACTCGGGGCTGT
CGAAGGCGGAGGGGCGCCGGGAGCGGCCGCTGTCCGCGGGGGCTCGGCGC
GCGTGGGGCGACGGGGAGGGCGAGCCGCTGCGCGCCATCAAGAGCGAGAC
GTCGCCGCTGGACAGCGCGCTGACGAAGCTGAGCCAGTCGCGGCGCACGG
AGGGCGGCGGGGTGCGAAGCGCGTTGGGGCTGCTGCGGCGCAGCGTGCGC
GGCGACGAGGGGGAGCGGCCGCGGCGGCTGGACTCGCTCAAGGCGATGGT
GCTGGGGCGCGCGCGCGCGGCGCGCGCGGAGGAGGGCGGGCAGGCGGTGC
GGCTGGTGTCGGGCGGCGGCGAGCGCGGGAGCGCGGCGGCGCGCGGCGGC
GAGGCGCGGCGCGCGCTCGCGTCGCGGTCGGCGAGCAAGGCGGGGCGCGG
GGAGCGGCGGTGGTGGGGCAAGCGGCGCGACGGCGGCGGCGGCGGCGGCG
GGGCGCGCGACAGGGGGCTCGTGGTCACGTCGGGCATGGGGGCGCTGCTG
CGGTCGCACAGGAAGGGCAGGTGACGCGACGGCGCCGCGCCCTCCCCCTC
GGTGCAAAAAGGCTCAACATTGGCGCGTGGCGCAGCGGTGCTGTGCGAGG
CGGCGAGCAAAGTGGGCGGCCTTGTTGGCGCGCACGTGTGTCGCTGTGTG
TGCAGGTGCAGGTACTCGGCAGTGGGGCGCGAGGAGACGAGCCGCGAGCT
GCTGCGCGTGCAGCGCTTCCGGGTGAGGACGGAGGCGCGTGAATGGCGGG
CAGCGGAGGGAGCGGCGCCGTTGCTCATTGCAGCGCAGCTTGGTCTTTGC
GCAAATAACTCACAAACACTTGAAACGCATCCTAAATCATTCATCGCAAA
ATAATTAAATATCTTTCGTTGCAAAATAACAAGCACCCCCACGTGGCCAG
CTGCACACGCTCTTCAACAAAGCGCTGTGAGGCGCAAATGAGCAAAACGT
GCTCTGAGCGCGCCTGAGGCGCTCAACAAGCGCTTCGCGCTCGGAGTTTC
AAGCCAACACCGCGCTGCGTCTCGGGGCAGCCTCGTCAACGGCTTCGCTG
GCGGGATCCCCGCTCCTTGGCTCACGTGCGCCAGTTCCTTTCCCACTCTT
CGGAGTGCATCCATCCTGTCCTGTCTTGCACTCTTTTGATCTTCTCAGCT
CTGGTAATCTGTTGCTGTTTTTCCAGCTTTGGCGCCCGGGCTGTGAACAC
TCCCGCATGTCAAGCTCAACTATGCGCACTCGCCGAGCACGAATCGAGGC
AACGCAAGTGTTTGATTTTGCTGTAG back to topCoding sequence (CDS) from alignment at ScGOVlb_425:2082453..2085928- >Gvermi12919.t2 ID=Gvermi12919.t2|Name=Gvermi12919.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2298bp|location=Sequence derived from alignment at ScGOVlb_425:2082453..2085928- (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGTTTCACAACTCCGCGCTGCGCGTCTTCCAGGCGCGCGTCGAGGCGCG CCTCCCCTCCGTCCTCATCTTCTACCGCGGCGAGCGCTCCTTCTTCTGTA AACAGTGGCTGCGCAGATGGTTGTCGATCCGCGGCCTGTCGCCGCGCCTG CGCCAGCTCAGCGCCGCCCTCATTTTCGTCAGCTCTCAGAGCCAGGGGAA GGCGTTCAGCGTAGCTGATCAGCTCGCCACAAACCGCCCCGATCTCCGCG ACCTCATCTTCTTCTTCGGCGACCCCGAAAACGCCCTCGCCCACTTCCTG CGCCGCAACGCCATCCCGGCCCCGGTCATCACCAACCCCGACGTCCACCG CGCCCACGGCTGGCTCTTCGAGCACGGCATGGTGCAGCCCGCCGTGCTCG CCACCTTCGAACACGCTGTACTCTACCAATGGTGCAGCCGCCCCTCCTTC CTCAACGGCGCCGGCAAGCTGGACCGCCCGGACCCGTGGCACATCTGGGA CGCCATCGAGTTCGAGATGGAGCGCCTCATCAAGGCGCACGCCGTTCCCC CCCCCGCCCACACCCCCCCGCACTGCCCGTCCCAGATCTCCCACACCTCC GCCCGCATCGCCGCCGCGCCCTCCACGTCCGCCACCGCCGACATCCCGCA ATCCCCCGTGCTCTCGGAGCTCAAGTCCACCGACAGCTCCCCCGCCTCGC ACCGCACCCGCCTCTCGTCGCGCCCAATTCACGTCGTCGAGGCCAAGATG CTCCGCACGCCCCCCGCCCACCGCACCCGCACCTGCACCGAACACAGCTC CTCCCCCGAGCAGCTGGCCGCCACCATACGCTCCTTGTCGTCAACTGTAA ACCCCCCCCTGTGCGACGCCCGCAAACCGCACACGCACACCGATGCAAGC GACGTGATTCGTTTACCACACATTCTGCAACACGTTTTTTCGTCGCCCAC AAACGTCAACCTCGAGTCCACGCCGCCGCAAAGTGCGCAGCCCAACGAAC TCCACCTCCAGTCCTCCTCGTGGTACGACCGCCCCGACACCGAGCTGAAT GCGTCGCAGGGCAAGCTGCACCAGTTCAGCGCCGAATGCACGTCCTCGTC CGACGCCACCGCCTGGGATCGCCTCCAACTGCTGGGCCGCCTGCACGGCT CACAGTCCTCGCTGCAGAGCAGCACCTCATCCGACCACAGGTCCTCGGAG CCGCAGCTCACCAGCGCTGAAAAGCACCACGCCAAACTGCGCGCCTACAC GCTCAGTGACGAGTACGCCTCGTCGGACATGGACGCCGTGTCGGCCAAGG ACGTGAGGGAGGGTCATGAAAGCGATGAACACCAGTACTCTCAACTGGTG GCGCGCGTGAGTGCTGCGGAGCGCCAAAGCGCAAATCGTAGCTTTCGCAG CCTTCTCAACGCCGAGTCGCAGGGCCCGTCCTCGTCGGACCTGCGCGAAC CTCTGGAAGGCAGCAACACGTCGCTTGGCTCCGACATGGTGGATTCATTT GTACGCAAGGTGCGTTCCGTGCGAACGTCCGACTCCACGCTGATGACGCA CTTCCGCGAGGGCATCTCGTTCCCGTCCATTCGAATCGACGAAGAAGGCG ACGGGATGGAGGCGGGCATGTTTGACATTCTCAAGGAACTGTCGGACCAT GTCAACGTGCAGGAGAGAAAAGAGAGTAACAAGTGCTTGAAAGACAAGTG TGCGCGGCCAGCCAATTACGTTGCGGACGTGAGAGCGGAAAACGGCACCC GCTCCCTTGAACGAAAGCTGAGCGCTGAGCCGGCGCCGCTGACGACGAGC TCGCTGAGAAATGTGCCCAGGGTTGGCTTCCGCAACTACTCGGACGCATT CATGACGGACCCGCTGCCGGTGAGAAGGGACCGCACGACGAAGGGGATTG TTCCAGCGGTGGGGGCGGCGGAGCTGAACTCCGAAAACGTTGGCTCGCTT GTGTCCGACGACGTTGCAGCCGCTTTCAAGATGTATGACAGTCGGAGCGA AATGACGCCGTACGCGCCATCGCTGCAATCGGACTTGAGTTCGGACGCCA AGGGGCCGGTGGTTGACGTGGACTCGCCGCCGAGATGGGATGAGCGGCGC GCGGGCAGCCACATTCACGACGAATACGAGGCGTACGACGAATTGGTTGT GGCGGAGTACCAGGTGGAAGAACGGGTGGAGGAGGAGCACTCGGGGCTCT TTGGCGCCCGGGCTGTGAACACTCCCGCATGTCAAGCTCAACTATGCGCA CTCGCCGAGCACGAATCGAGGCAACGCAAGTGTTTGATTTTGCTGTAG back to top
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