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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 946362.XP_004994257.1 |
| Preferred name | ARMC6 |
| PFAMs | Arm |
| Max annot lvl | 33154|Opisthokonta |
| GOs | GO:0002244,GO:0002376,GO:0002520,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007275,GO:0008150,GO:0009987,GO:0030097,GO:0030154,GO:0032501,GO:0032502,GO:0044424,GO:0044444,GO:0044464,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0048869 |
| Evalue | 0.000335 |
| EggNOG OGs | KOG4199@1|root,KOG4199@2759|Eukaryota,39241@33154|Opisthokonta |
| Description | hematopoietic progenitor cell differentiation |
| COG category | U |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12880.t2 ID=Gvermi12880.t2|Name=Gvermi12880.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=878bp LFSARKEHVDPPDARRTQFPSSSHAPPLDHRPPLSRGPQNSPPTVLNVRS EPSHRLKSLINAARSVADNDDDSARSADPSLAGSSRTSIPVSPVTGTSQS HSTVGSVAPWDRKEHHSSSPVPSPPGPLSVRFDVDRIKPSDHLLSQAHPS APSPPTPTDPISHSESLATHAFDDSQIQSPTLTPQSPELHKHSTHPAENL QSRLSSDSDSDSDSDSDQSLPSAHSEISSPNVKYPSPTTISQPQSYNQPP AHRSFPLRLPPRARTPNSMGVPTALRFDNLDATDNTTALPANSSGKPPLP PPKAIHRQRSKPVPYQAHLPSERKDDAPTSVLEAAAPMDSSSSEVYNSIS ERGERVAAAFERLGKQTDEFPDTPSELTGGLSPKEVIIPLIVEAMHQHRS DPKVADRALTILRRLTVSENCRRCIGENGGIEAVVEIMRAHSLRSGIQTQ GCLTLANLAFRNRNNKEAVMKCSGLKVVVAALSAHPNVEQIQAWGCLAIR NFTNRSDAGEQETSVASGAVEVLLSALERYSSSETVQNNALIALTNIASR SPYGMERLRTAGGIQVLVSSLKRNVHSLKVAEVGMSLTRVVAEDDRNKEL FGQSDGIQAMTAVMDTHRGHIAINVKGCAAVRHLAFRRKNREIMGSCGII RTIVCVMDECTSASPDGACYFLKALCNATFDSLASKTFAGRCGAVEATLR IMSDSSYREVGRVVEDACRLLRSLLDGVSQNQRNMLKHRGVAVVLDAART HGEALAGVAEHSVAIFVNMVTIRGFVSQLQEGSGDVSQLARRLRKAHEGN PRVEAQVISFVRTLERDERSVASTGSADIRDWRTKSSIERALRPVRSLHK GRHADDDHETRLQRLRSMPLPMVRNRN* back to topspliced messenger RNA >Gvermi12880.t2 ID=Gvermi12880.t2|Name=Gvermi12880.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2634bp|location=Sequence derived from alignment at ScGOVlb_425:1890011..1892644+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
CTGTTCTCCGCCCGAAAGGAGCATGTGGACCCGCCCGACGCCCGCCGCAC TCAGTTCCCGTCATCCTCTCACGCGCCCCCTTTAGATCACCGGCCGCCTC TCTCGCGCGGCCCCCAGAATTCGCCGCCCACCGTTCTCAACGTGAGGTCG GAGCCGTCACACCGCCTCAAGTCGCTCATAAATGCCGCTCGCTCGGTTGC CGACAACGATGACGACTCCGCCCGCAGCGCCGACCCTTCACTCGCCGGCT CGTCGCGCACTTCCATACCTGTGTCCCCCGTCACCGGCACGTCGCAGTCC CACTCCACAGTCGGCTCCGTCGCCCCGTGGGACCGCAAGGAACACCACTC ATCTTCGCCTGTCCCCTCACCACCGGGCCCGCTCTCCGTGCGCTTTGACG TTGACAGAATCAAGCCCTCAGACCACTTGTTGTCTCAGGCGCACCCATCC GCGCCGTCGCCTCCGACACCAACTGACCCTATTTCGCACTCCGAGTCTCT CGCAACGCATGCTTTCGATGACTCTCAAATCCAGAGTCCCACCCTCACAC CGCAGTCACCAGAGCTCCACAAGCATTCCACGCATCCAGCAGAAAACCTC CAGTCCCGGTTAAGctctgactctgactctgactctgactctgactcGGA TCAAAGTTTGCCATCCGCCCACAGTGAGATATCCTCTCCGAACGTCAAGT ATCCTTCGCCCACAACCATCTCTCAACCTCAATCGTACAACCAACCACCA GCACACCGTTCGTTCCCTTTGCGTCTACCCCCCCGTGCGCGCACCCCAAA TTCGATGGGCGTGCCCACCGCTCTGCGCTTCGACAACTTGGATGCCACTG ACAATACGACGGCACTTCCAGCCAACTCGAGCGGTAAACCACCATTGCCA CCGCCCAAAGCCATTCATCGCCAACGTTCAAAGCCTGTGCCCTACCAAGC TCATCTTCCTTCTGAACGGAAGGATGATGCCCCTACCTCTGTTCTAGAAG CGGCAGCTCCAATGGACAGTTCGTCTTCGGAGGTGTACAATAGTATCAGC GAACGAGGTGAACGTGTGGCCGCTGCCTTTGAGCGTTTGGGAAAGCAAAC CGATGAATTCCCAGACACTCCTTCTGAATTGACGGGTGGTTTAAGCCCGA AGGAAGTTATTATCCCTTTGATCGTGGAGGCCATGCATCAGCATCGCAGT GACCCCAAGGTGGCTGATCGTGCCTTAACAATCCTGAGACGCTTAACAGT TTCGGAGAACTGCCGTAGATGCATCGGTGAAAACGGCGGTATAGAGGCGG TTGTGGAAATTATGAGGGCTCATTCTCTGCGATCCGGTATTCAAACCCAG GGTTGCCTAACTTTGGCAAATCTCGCATTCCGCAATCGCAACAACAAAGA AGCCGTCATGAAATGTAGCGGCTTGAAAGTCGTTGTGGCAGCGCTTTCGG CGCATCCGAACGTGGAGCAGATCCAGGCATGGGGATGTCTTGCCATTCGA AACTTCACCAATCGATCAGATGCTGGAGAACAAGAGACTTCAGTTGCGTC TGGGGCCGTCGAAGTGTTGTTATCTGCCCTGGAGCGCTACTCGAGCTCTG AGACGGTACAGAACAACGCGCTGATCGCGTTGACCAACATTGCGAGTCGT TCCCCGTATGGCATGGAGCGTTTGCGTACGGCTGGTGGTATTCAGGTGCT CGTGTCATCGTTGAAACGAAATGTGCACTCCCTGAAAGTGGCGGAAGTTG GAATGTCTCTCACACGCGTCGTGGCTGAGGACGATAGGAACAAAGAGCTA TTCGGTCAATCGGATGGGATTCAGGCTATGACGGCTGTCATGGATACGCA TCGTGGACACATAGCCATCAATGTTAAGGGCTGTGCAGCAGTGCGGCATC TCGCTTTCCGTCGTAAGAATCGCGAAATCATGGGTAGCTGTGGCATAATA AGAACCATCGTGTGTGTGATGGACGAGTGCACTTCCGCATCACCTGATGG AGCATGCTACTTTCTAAAGGCTCTTTGCAATGCAACATTTGACTCTCTAG CAAGCAAGACATTTGCTGGAAGATGTGGAGCTGTTGAGGCCACCTTGCGC ATAATGTCTGACAGCTCATATCGAGAAGTGGGTCGCGTTGTAGAAGATGC CTGTCGCTTGCTGCGAAGCCTCTTGGATGGAGTTTCCCAAAATCAGCGCA ACATGCTCAAGCACAGAGGGGTAGCAGTTGTATTGGATGCAGCTCGTACG CACGGGGAGGCCCTTGCTGGAGTTGCGGAACACAGTGTGGCCATTTTTGT GAATATGGTCACAATTCGTGGGTTTGTTTCTCAATTGCAAGAAGGCAGCG GGGACGTGAGTCAGCTCGCCAGGAGACTTCGAAAAGCTCATGAGGGTAAC CCACGAGTCGAAGCCCAAGTGATCAGCTTCGTTCGCACTCTTGAAAGAGA TGAGCGCTCAGTTGCCAGCACGGGGAGCGCAGATATCCGAGACTGGCGGA CCAAATCGAGCATAGAGCGTGCATTGCGCCCAGTAAGATCTTTACACAAA GGTCGTCATGCTGATGACGACCATGAGACACGACTGCAGAGATTGCGTTC AATGCCATTGCCTATGGTCAGGAACCGCAACTGA back to topprotein sequence of Gvermi12880.t2 >Gvermi12880.t2 ID=Gvermi12880.t2|Name=Gvermi12880.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=878bp
LFSARKEHVDPPDARRTQFPSSSHAPPLDHRPPLSRGPQNSPPTVLNVRS EPSHRLKSLINAARSVADNDDDSARSADPSLAGSSRTSIPVSPVTGTSQS HSTVGSVAPWDRKEHHSSSPVPSPPGPLSVRFDVDRIKPSDHLLSQAHPS APSPPTPTDPISHSESLATHAFDDSQIQSPTLTPQSPELHKHSTHPAENL QSRLSSDSDSDSDSDSDQSLPSAHSEISSPNVKYPSPTTISQPQSYNQPP AHRSFPLRLPPRARTPNSMGVPTALRFDNLDATDNTTALPANSSGKPPLP PPKAIHRQRSKPVPYQAHLPSERKDDAPTSVLEAAAPMDSSSSEVYNSIS ERGERVAAAFERLGKQTDEFPDTPSELTGGLSPKEVIIPLIVEAMHQHRS DPKVADRALTILRRLTVSENCRRCIGENGGIEAVVEIMRAHSLRSGIQTQ GCLTLANLAFRNRNNKEAVMKCSGLKVVVAALSAHPNVEQIQAWGCLAIR NFTNRSDAGEQETSVASGAVEVLLSALERYSSSETVQNNALIALTNIASR SPYGMERLRTAGGIQVLVSSLKRNVHSLKVAEVGMSLTRVVAEDDRNKEL FGQSDGIQAMTAVMDTHRGHIAINVKGCAAVRHLAFRRKNREIMGSCGII RTIVCVMDECTSASPDGACYFLKALCNATFDSLASKTFAGRCGAVEATLR IMSDSSYREVGRVVEDACRLLRSLLDGVSQNQRNMLKHRGVAVVLDAART HGEALAGVAEHSVAIFVNMVTIRGFVSQLQEGSGDVSQLARRLRKAHEGN PRVEAQVISFVRTLERDERSVASTGSADIRDWRTKSSIERALRPVRSLHK GRHADDDHETRLQRLRSMPLPMVRNRN* back to topmRNA from alignment at ScGOVlb_425:1890011..1892644+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12880.t2 ID=Gvermi12880.t2|Name=Gvermi12880.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2634bp|location=Sequence derived from alignment at ScGOVlb_425:1890011..1892644+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) CTGTTCTCCGCCCGAAAGGAGCATGTGGACCCGCCCGACGCCCGCCGCAC
TCAGTTCCCGTCATCCTCTCACGCGCCCCCTTTAGATCACCGGCCGCCTC
TCTCGCGCGGCCCCCAGAATTCGCCGCCCACCGTTCTCAACGTGAGGTCG
GAGCCGTCACACCGCCTCAAGTCGCTCATAAATGCCGCTCGCTCGGTTGC
CGACAACGATGACGACTCCGCCCGCAGCGCCGACCCTTCACTCGCCGGCT
CGTCGCGCACTTCCATACCTGTGTCCCCCGTCACCGGCACGTCGCAGTCC
CACTCCACAGTCGGCTCCGTCGCCCCGTGGGACCGCAAGGAACACCACTC
ATCTTCGCCTGTCCCCTCACCACCGGGCCCGCTCTCCGTGCGCTTTGACG
TTGACAGAATCAAGCCCTCAGACCACTTGTTGTCTCAGGCGCACCCATCC
GCGCCGTCGCCTCCGACACCAACTGACCCTATTTCGCACTCCGAGTCTCT
CGCAACGCATGCTTTCGATGACTCTCAAATCCAGAGTCCCACCCTCACAC
CGCAGTCACCAGAGCTCCACAAGCATTCCACGCATCCAGCAGAAAACCTC
CAGTCCCGGTTAAGctctgactctgactctgactctgactctgactcGGA
TCAAAGTTTGCCATCCGCCCACAGTGAGATATCCTCTCCGAACGTCAAGT
ATCCTTCGCCCACAACCATCTCTCAACCTCAATCGTACAACCAACCACCA
GCACACCGTTCGTTCCCTTTGCGTCTACCCCCCCGTGCGCGCACCCCAAA
TTCGATGGGCGTGCCCACCGCTCTGCGCTTCGACAACTTGGATGCCACTG
ACAATACGACGGCACTTCCAGCCAACTCGAGCGGTAAACCACCATTGCCA
CCGCCCAAAGCCATTCATCGCCAACGTTCAAAGCCTGTGCCCTACCAAGC
TCATCTTCCTTCTGAACGGAAGGATGATGCCCCTACCTCTGTTCTAGAAG
CGGCAGCTCCAATGGACAGTTCGTCTTCGGAGGTGTACAATAGTATCAGC
GAACGAGGTGAACGTGTGGCCGCTGCCTTTGAGCGTTTGGGAAAGCAAAC
CGATGAATTCCCAGACACTCCTTCTGAATTGACGGGTGGTTTAAGCCCGA
AGGAAGTTATTATCCCTTTGATCGTGGAGGCCATGCATCAGCATCGCAGT
GACCCCAAGGTGGCTGATCGTGCCTTAACAATCCTGAGACGCTTAACAGT
TTCGGAGAACTGCCGTAGATGCATCGGTGAAAACGGCGGTATAGAGGCGG
TTGTGGAAATTATGAGGGCTCATTCTCTGCGATCCGGTATTCAAACCCAG
GGTTGCCTAACTTTGGCAAATCTCGCATTCCGCAATCGCAACAACAAAGA
AGCCGTCATGAAATGTAGCGGCTTGAAAGTCGTTGTGGCAGCGCTTTCGG
CGCATCCGAACGTGGAGCAGATCCAGGCATGGGGATGTCTTGCCATTCGA
AACTTCACCAATCGATCAGATGCTGGAGAACAAGAGACTTCAGTTGCGTC
TGGGGCCGTCGAAGTGTTGTTATCTGCCCTGGAGCGCTACTCGAGCTCTG
AGACGGTACAGAACAACGCGCTGATCGCGTTGACCAACATTGCGAGTCGT
TCCCCGTATGGCATGGAGCGTTTGCGTACGGCTGGTGGTATTCAGGTGCT
CGTGTCATCGTTGAAACGAAATGTGCACTCCCTGAAAGTGGCGGAAGTTG
GAATGTCTCTCACACGCGTCGTGGCTGAGGACGATAGGAACAAAGAGCTA
TTCGGTCAATCGGATGGGATTCAGGCTATGACGGCTGTCATGGATACGCA
TCGTGGACACATAGCCATCAATGTTAAGGGCTGTGCAGCAGTGCGGCATC
TCGCTTTCCGTCGTAAGAATCGCGAAATCATGGGTAGCTGTGGCATAATA
AGAACCATCGTGTGTGTGATGGACGAGTGCACTTCCGCATCACCTGATGG
AGCATGCTACTTTCTAAAGGCTCTTTGCAATGCAACATTTGACTCTCTAG
CAAGCAAGACATTTGCTGGAAGATGTGGAGCTGTTGAGGCCACCTTGCGC
ATAATGTCTGACAGCTCATATCGAGAAGTGGGTCGCGTTGTAGAAGATGC
CTGTCGCTTGCTGCGAAGCCTCTTGGATGGAGTTTCCCAAAATCAGCGCA
ACATGCTCAAGCACAGAGGGGTAGCAGTTGTATTGGATGCAGCTCGTACG
CACGGGGAGGCCCTTGCTGGAGTTGCGGAACACAGTGTGGCCATTTTTGT
GAATATGGTCACAATTCGTGGGTTTGTTTCTCAATTGCAAGAAGGCAGCG
GGGACGTGAGTCAGCTCGCCAGGAGACTTCGAAAAGCTCATGAGGGTAAC
CCACGAGTCGAAGCCCAAGTGATCAGCTTCGTTCGCACTCTTGAAAGAGA
TGAGCGCTCAGTTGCCAGCACGGGGAGCGCAGATATCCGAGACTGGCGGA
CCAAATCGAGCATAGAGCGTGCATTGCGCCCAGTAAGATCTTTACACAAA
GGTCGTCATGCTGATGACGACCATGAGACACGACTGCAGAGATTGCGTTC
AATGCCATTGCCTATGGTCAGGAACCGCAACTGA back to topCoding sequence (CDS) from alignment at ScGOVlb_425:1890011..1892644+ >Gvermi12880.t2 ID=Gvermi12880.t2|Name=Gvermi12880.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2634bp|location=Sequence derived from alignment at ScGOVlb_425:1890011..1892644+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) CTGTTCTCCGCCCGAAAGGAGCATGTGGACCCGCCCGACGCCCGCCGCAC TCAGTTCCCGTCATCCTCTCACGCGCCCCCTTTAGATCACCGGCCGCCTC TCTCGCGCGGCCCCCAGAATTCGCCGCCCACCGTTCTCAACGTGAGGTCG GAGCCGTCACACCGCCTCAAGTCGCTCATAAATGCCGCTCGCTCGGTTGC CGACAACGATGACGACTCCGCCCGCAGCGCCGACCCTTCACTCGCCGGCT CGTCGCGCACTTCCATACCTGTGTCCCCCGTCACCGGCACGTCGCAGTCC CACTCCACAGTCGGCTCCGTCGCCCCGTGGGACCGCAAGGAACACCACTC ATCTTCGCCTGTCCCCTCACCACCGGGCCCGCTCTCCGTGCGCTTTGACG TTGACAGAATCAAGCCCTCAGACCACTTGTTGTCTCAGGCGCACCCATCC GCGCCGTCGCCTCCGACACCAACTGACCCTATTTCGCACTCCGAGTCTCT CGCAACGCATGCTTTCGATGACTCTCAAATCCAGAGTCCCACCCTCACAC CGCAGTCACCAGAGCTCCACAAGCATTCCACGCATCCAGCAGAAAACCTC CAGTCCCGGTTAAGctctgactctgactctgactctgactctgactcGGA TCAAAGTTTGCCATCCGCCCACAGTGAGATATCCTCTCCGAACGTCAAGT ATCCTTCGCCCACAACCATCTCTCAACCTCAATCGTACAACCAACCACCA GCACACCGTTCGTTCCCTTTGCGTCTACCCCCCCGTGCGCGCACCCCAAA TTCGATGGGCGTGCCCACCGCTCTGCGCTTCGACAACTTGGATGCCACTG ACAATACGACGGCACTTCCAGCCAACTCGAGCGGTAAACCACCATTGCCA CCGCCCAAAGCCATTCATCGCCAACGTTCAAAGCCTGTGCCCTACCAAGC TCATCTTCCTTCTGAACGGAAGGATGATGCCCCTACCTCTGTTCTAGAAG CGGCAGCTCCAATGGACAGTTCGTCTTCGGAGGTGTACAATAGTATCAGC GAACGAGGTGAACGTGTGGCCGCTGCCTTTGAGCGTTTGGGAAAGCAAAC CGATGAATTCCCAGACACTCCTTCTGAATTGACGGGTGGTTTAAGCCCGA AGGAAGTTATTATCCCTTTGATCGTGGAGGCCATGCATCAGCATCGCAGT GACCCCAAGGTGGCTGATCGTGCCTTAACAATCCTGAGACGCTTAACAGT TTCGGAGAACTGCCGTAGATGCATCGGTGAAAACGGCGGTATAGAGGCGG TTGTGGAAATTATGAGGGCTCATTCTCTGCGATCCGGTATTCAAACCCAG GGTTGCCTAACTTTGGCAAATCTCGCATTCCGCAATCGCAACAACAAAGA AGCCGTCATGAAATGTAGCGGCTTGAAAGTCGTTGTGGCAGCGCTTTCGG CGCATCCGAACGTGGAGCAGATCCAGGCATGGGGATGTCTTGCCATTCGA AACTTCACCAATCGATCAGATGCTGGAGAACAAGAGACTTCAGTTGCGTC TGGGGCCGTCGAAGTGTTGTTATCTGCCCTGGAGCGCTACTCGAGCTCTG AGACGGTACAGAACAACGCGCTGATCGCGTTGACCAACATTGCGAGTCGT TCCCCGTATGGCATGGAGCGTTTGCGTACGGCTGGTGGTATTCAGGTGCT CGTGTCATCGTTGAAACGAAATGTGCACTCCCTGAAAGTGGCGGAAGTTG GAATGTCTCTCACACGCGTCGTGGCTGAGGACGATAGGAACAAAGAGCTA TTCGGTCAATCGGATGGGATTCAGGCTATGACGGCTGTCATGGATACGCA TCGTGGACACATAGCCATCAATGTTAAGGGCTGTGCAGCAGTGCGGCATC TCGCTTTCCGTCGTAAGAATCGCGAAATCATGGGTAGCTGTGGCATAATA AGAACCATCGTGTGTGTGATGGACGAGTGCACTTCCGCATCACCTGATGG AGCATGCTACTTTCTAAAGGCTCTTTGCAATGCAACATTTGACTCTCTAG CAAGCAAGACATTTGCTGGAAGATGTGGAGCTGTTGAGGCCACCTTGCGC ATAATGTCTGACAGCTCATATCGAGAAGTGGGTCGCGTTGTAGAAGATGC CTGTCGCTTGCTGCGAAGCCTCTTGGATGGAGTTTCCCAAAATCAGCGCA ACATGCTCAAGCACAGAGGGGTAGCAGTTGTATTGGATGCAGCTCGTACG CACGGGGAGGCCCTTGCTGGAGTTGCGGAACACAGTGTGGCCATTTTTGT GAATATGGTCACAATTCGTGGGTTTGTTTCTCAATTGCAAGAAGGCAGCG GGGACGTGAGTCAGCTCGCCAGGAGACTTCGAAAAGCTCATGAGGGTAAC CCACGAGTCGAAGCCCAAGTGATCAGCTTCGTTCGCACTCTTGAAAGAGA TGAGCGCTCAGTTGCCAGCACGGGGAGCGCAGATATCCGAGACTGGCGGA CCAAATCGAGCATAGAGCGTGCATTGCGCCCAGTAAGATCTTTACACAAA GGTCGTCATGCTGATGACGACCATGAGACACGACTGCAGAGATTGCGTTC AATGCCATTGCCTATGGTCAGGAACCGCAACTGA back to top
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