Gvermi11673.t1 (mRNA) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gvermi11673.t1
Unique Name	Gvermi11673.t1
Type	mRNA
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	1751

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:1603344..1608596 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	2711.XP_006491399.1
Preferred name	DCL1
PFAMs	DEAD,DND1_DSRM,Dicer_dimer,Helicase_C,PAZ,ResIII,Ribonuclease_3,dsrm
Max annot lvl	35493\|Streptophyta
KEGG ko	ko:K11592
KEGG Pathway	ko05206,map05206
GOs	GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0014070,GO:0016070,GO:0016246,GO:0016441,GO:0016442,GO:0016458,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019222,GO:0030422,GO:0031047,GO:0031050,GO:0031332,GO:0032296,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0035194,GO:0035195,GO:0035196,GO:0040029,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043331,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0048519,GO:0048856,GO:0050789,GO:0050896,GO:0051716,GO:0060255,GO:0065007,GO:0070887,GO:0070918,GO:0071310,GO:0071359,GO:0071407,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1901698,GO:1901699,GO:1990904
Evalue	4.3e-85
EggNOG OGs	COG0571@1\|root,KOG0701@2759\|Eukaryota,37KGS@33090\|Viridiplantae,3G89J@35493\|Streptophyta
Description	Belongs to the helicase family. Dicer subfamily
COG category	A
BRITE	ko00000,ko00001,ko01000,ko03036

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi11673	Gvermi11673	Gracilaria vermiculophylla HapMaleFtJ_2017 male	gene	ScGOVlb_3404 1603344..1608596 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi11673.t1.stop1	Gvermi11673.t1.stop1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	stop_codon	ScGOVlb_3404 1603344..1603346 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi11673.t1.CDS1	Gvermi11673.t1.CDS1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	CDS	ScGOVlb_3404 1603344..1608596 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi11673.t1.exon1	Gvermi11673.t1.exon1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	exon	ScGOVlb_3404 1603344..1608596 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi11673.t1.start1	Gvermi11673.t1.start1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	start_codon	ScGOVlb_3404 1608594..1608596 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gvermi11673.t1	Gvermi11673.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	polypeptide	ScGOVlb_3404 1603344..1608596 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at ScGOVlb_3404:1603344..1608596-
coding sequence from alignment at ScGOVlb_3404:1603344..1608596-

mRNA sequence

>Gvermi11673.t1 ID=Gvermi11673.t1|Name=Gvermi11673.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=1751bp
MSVSSDSDSVVEPLSHSRPQRNRRRRRFHKRSWPSDVRFTLKWGSDSDSS
DSEPLPKESGTGKSNSTAFPSLPLLNMEQNLDEACTSLRSGGPSYSAPAL
LPNQSPPTAHPEEALIPRRYQLEILRQAKETNIIAVLETGAGKTLVAALL
VKETLRSLNNPEMVDKTNLSFSLLPHVSPSYGVVSPRIVSAVEPNVDASH
EAISSLHTTQNADPDPSLGSDFQQNMSELLSSSNESMESAAMDNDILEAT
QVQRVEPSNCSVSSGVAPHLLEENRPGFIAPLANGSNVMGPPYDATDLSS
SISEPSVKNNPNSISALFHRNKNTALRKQIVFLVHRVALVPQQAKVLRSV
IPPEHRVALFYGEKSGDEWSSSEWIFKLRSKTVLVMTAQILLNLLRHGIL
DMQNLALLILDEVHHATGNHPYSRIFVEFYHTIPQGRPRPRVFGMTATPV
KRKAQAKSEEHCLHGICALEATLDANIVTVSDDHHEEFHEHVPKPEELVL
QYKGTQDNEEVYEFSDYDLESRVLSKFENDSSSDTCGVRDVKDSGSDEGK
PKPCDIENGDCALQADEMKVIHHICRKLGLMAAHGFAVRLCKASGVDQQK
VMDELLPECIPTQIETGGMPEKVSKLLDLLCSEWLRYEEDAKASHAAADG
FRCIVFIHERSCALALAWLINEVFQHMNTKALQASSVVGCQSNESIVRMS
RSKLLRTVNEFRNGGFGVLVATNVVEEGLNVPTCRLVVSFDDIKSPTAYV
QARGRARRKNSKYVVFLDENDKKCSQAFLDARRGATLMSQVSKRNRLSKK
EKESIRASFLADNIVEEDVLYSRTTNAKVDPTQAVCLLEKYCNMKASQWN
VDNARPKYQATEVSTGILATVKINEKSGIDGGCCNEPKKNELLARRYAAL
DAYKKLYEIGEVDAYLLPRRPPRSLRVLRSPGLKSDKRLRIQPVKGHRRR
CREVQSKASKKDKRVRRCNILHPSVLQLEASENVQKIQTLDEKENAAAKS
VQADPVQRSTLTLNMRVDKVPRKFLMYIVKLDCDMSKMAWYEEYKEEHYA
LLVREQLLDEDLTAVRCPTGQSMFTLKYHKEIEWSADLHTRAQKYVLFLQ
LCLWGRTPGSSRALEVEVGEKVKGSIAGFLLMPLKKDAANHYDVDWKSVD
HAISLTWKKKRNEEGNTASPHHYEHALVCSSHENFDRVYLSGCVDDSIRA
DSSVEGYLNPNTFKSFVDYYRLRHKLVIKDSKQPMLPGASVRSTMNQLSL
SFFMLPIETCALIPISPQACFITGMLPAWQTFLAIRNCWRKNSVKACPAE
FLSFAKALQPNISYVTKGVADLSYERLEFLGDAVLKVLFSMVAFVGNPEE
SEGILSDIRDIEVSNQRLADLAIQMKLHDCVAFSGVSQNVKSWPWFWASQ
SGDQIRISEKVLADCVEALLGVQYLYGGLELVTAFVDKHNLMPGACRVLG
YTTTSHVNTLVLPVPPMASGDDRYESDALKEIEDILGYKFRDRRHLVIAL
THGSFENGHITSYQRYEYLGDAIIGFLLLSHFFNEYPNFSPGELTSLRGP
ALSNDLFARVIVSKGIHRKFWYDCLPLKKEIERFVNLVANEEDDEEDVCK
TMTVPKVLGDLLESIIGAIVVDKGMRFDGVQDIVLRLMEDELNRFANPSK
FRRNPISELVCIVQKRFRTKGPRYEYLDESNDMQKICVVSVENQELGKGF
GPTRRIARRHASIVALNKLLESTVEDLEKGDQQIEDCSNDEDMIPSSENI
*

spliced messenger RNA

>Gvermi11673.t1 ID=Gvermi11673.t1|Name=Gvermi11673.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=5253bp|location=Sequence derived from alignment at ScGOVlb_3404:1603344..1608596- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTGTCTCGTCTGATTCGGACTCCGTAGTCGAACCGCTTTCTCATTC
GCGGCCGCAACGTAACCGACGTCGTCGACGTTTTCATAAACGTTCATGGC
CTTCGGATGTACGTTTCACGCTCAAATGGGGTTCTGATTCAGATTCTTCC
GATTCTGAACCGTTACCAAAAGAATCTGGCACAGGTAAAAGCAATTCGAC
AGCATTCCCCAGTCTTCCACTGTTAAACATGGAACAGAATTTAGATGAGG
CATGCACATCGTTGCGGTCTGGAGGCCCAAGTTATTCTGCCCCAGCTCTG
CTTCCAAACCAAAGCCCACCAACTGCACATCCAGAAGAAGCTCTCATTCC
GCGTCGCTATCAGTTGGAAATCCTTCGGCAAGCCAAGGAAACCAACATCA
TAGCCGTCCTTGAAACAGGCGCCGGAAAAACGCTCGTAGCAGCTCTTCTT
GTTAAGGAAACGCTTCGATCGCTTAATAACCCTGAGATGGTGGACAAAAC
TAATCTTTCTTTCTCACTGCTTCCGCATGTATCCCCATCTTATGGAGTCG
TATCGCCGCGAATCGTATCAGCTGTGGAACCGAATGTTGATGCATCTCAC
GAAGCCATCTCATCTTTGCATACTACTCAAAATGCAGATCCTGACCCAAG
TCTGGGGTCGGATTTTCAACAAAACATGTCTGAGCTGTTGAGCAGCTCAA
ATGAGTCTATGGAAAGCGCTGCAATGGACAACGATATCCTTGAAGCGACT
CAAGTGCAAAGGGTCGAGCCTTCAAACTGTTCAGTATCCTCCGGAGTTGC
GCCACATTTGCTTGAGGAAAATCGTCCGGGATTTATCGCCCCGCTTGCAA
ATGGTTCCAATGTCATGGGGCCCCCCTACGATGCCACTGACTTGAGCAGC
TCTATCAGTGAGCCTTCAGTTAAGAACAACCCGAATTCAATTTCTGCCTT
GTTCCACAGAAACAAGAACACCGCTCTCCGAAAGCAAATTGTATTTCTGG
TACACCGTGTCGCCCTGGTTCCGCAGCAAGCCAAGGTGCTGCGGTCGGTA
ATACCGCCTGAGCATCGTGTAGCTCTCTTCTATGGTGAGAAAAGCGGAGA
TGAATGGTCTTCTTCGGAATGGATTTTCAAACTGCGATCGAAAACTGTCT
TGGTAATGACAGCACAAATTCTTCTAAATCTACTCCGTCACGGTATCCTC
GACATGCAAAACTTGGCACTTCTAATTCTTGATGAAGTACATCATGCCAC
TGGAAATCATCCTTACAGCCGTATTTTTGTCGAGTTCTATCACACGATTC
CACAAGGTCGCCCCCGTCCTCGTGTATTTGGAATGACAGCTACTCCAGTA
AAACGCAAAGCTCAAGCGAAATCAGAAGAGCATTGTTTGCACGGAATATG
CGCATTAGAAGCTACATTGGACGCCAACATTGTTACTGTCTCCGATGATC
ACCACGAGGAGTTTCATGAGCATGTTCCGAAACCGGAAGAACTTGTCTTA
CAATACAAGGGAACTCAGGATAATGAAGAAGTTTATGAATTCAGCGACTA
TGACCTCGAGTCAAGGGTTCTTTCCAAGTTTGAAAATGATTCCAGCTCAG
ATACTTGCGGGGTGCGAGACGTAAAGGACTCGGGCAGCGATGAAGGGAAG
CCGAAACCATGTGATATAGAAAACGGAGATTGTGCACTCCAAGCAGATGA
GATGAAAGTCATTCATCATATTTGTCGAAAACTTGGGCTTATGGCTGCTC
ATGGCTTTGCAGTGCGTCTATGCAAAGCATCTGGAGTGGATCAACAAAAA
GTTATGGACGAATTGCTCCCTGAATGCATCCCAACACAAATTGAAACCGG
CGGAATGCCAGAGAAAGTGTCAAAACTTCTCGACCTTCTATGTTCAGAAT
GGTTGAGATACGAAGAGGACGCAAAAGCTTCCCATGCAGCGGCAGACGGG
TTTCGGTGCATTGTTTTCATTCACGAGCGGAGCTGTGCACTCGCGCTGGC
ATGGCTAATCAATGAAGTGTTTCAGCACATGAATACGAAGGCACTCCAAG
CCAGCTCCGTTGTCGGCTGTCAAAGCAACGAGTCCATAGTACGAATGTCG
CGTTCAAAGTTATTACGAACTGTTAATGAGTTTCGGAACGGAGGTTTTGG
CGTTCTTGTGGCCACAAATGTTGTTGAGGAAGGACTAAATGTTCCCACTT
GCCGCCTTGTGGTCTCTTTTGATGATATTAAGTCCCCAACGGCATATGTT
CAAGCTCGAGGGAGAGCTAGGAGAAAAAACTCTAAATATGTTGTCTTCTT
GGATGAGAATGACAAAAAGTGTTCTCAGGCGTTCCTTGATGCGAGACGTG
GTGCCACCTTGATGAGCCAAGTATCAAAAAGAAATCGCCTCTCTAAGAAA
GAAAAAGAATCGATTCGCGCTAGCTTTTTGGCGGATAATATTGTCGAAGA
GGATGTGTTATATTCACGTACCACCAATGCGAAAGTTGATCCGACACAAG
CAGTTTGCTTGCTTGAAAAGTATTGCAACATGAAAGCTTCGCAGTGGAAT
GTCGATAACGCAAGGCCAAAGTACCAAGCAACTGAAGTATCAACTGGGAT
TCTAGCAACCGTGAAAATTAACGAGAAGTCCGGCATCGATGGCGGATGCT
GTAACGAACCAAAGAAAAACGAACTTCTTGCGCGTAGATATGCGGCTCTG
GATGCATATAAAAAGCTATATGAAATAGGAGAAGTGGACGCCTACCTTTT
ACCTCGACGTCCACCTCGATCGCTGCGTGTGCTCCGAAGCCCTGGACTAA
AATCGGATAAAAGATTGCGAATTCAACCCGTTAAAGGTCATCGACGCCGA
TGCCGAGAGGTGCAATCAAAGGCGTCCAAGAAAGATAAACGTGTTCGCCG
ATGTAACATACTTCATCCGAGCGTGTTGCAGCTTGAGGCTTCCGAGAATG
TGCAAAAGATACAGACCTTGGATGAGAAAGAAAATGCGGCTGCGAAGAGT
GTACAAGCAGATCCGGTTCAACGATCGACATTAACTCTTAACATGAGGGT
AGACAAAGTCCCAAGGAAATTCCTCATGTATATCGTCAAGCTTGACTGCG
ATATGTCAAAAATGGCGTGGTACGAGGAATATAAGGAAGAGCATTATGCA
CTTCTTGTCCGAGAACAGCTTTTGGATGAAGATCTGACAGCCGTGCGATG
TCCTACTGGACAAAGTATGTTCACTCTGAAATATCATAAGGAGATCGAAT
GGTCCGCTGATCTTCATACCAGGGCACAGAAATATGTGCTATTTTTGCAG
TTATGTCTATGGGGTCGCACACCTGGCTCGTCGAGGGCACTCGAAGTTGA
GGTCGGGGAAAAGGTGAAAGGTTCGATTGCTGGTTTTTTGCTCATGCCAC
TCAAAAAGGACGCAGCCAATCACTACGATGTGGACTGGAAGTCGGTAGAT
CACGCCATCAGTCTCACATGGAAAAAGAAACGAAATGAGGAGGGCAACAC
AGCGAGTCCTCACCATTACGAACATGCCCTCGTATGTTCTTCCCATGAGA
ATTTCGATCGCGTCTACTTGAGCGGATGCGTTGATGACAGTATTAGGGCA
GATTCTTCTGTTGAAGGTTACCTCAATCCCAATACGTTCAAGTCATTTGT
GGATTACTACCGATTGAGGCATAAGTTGGTTATCAAAGACAGCAAACAAC
CGATGCTGCCTGGAGCAAGTGTTAGGAGCACCATGAACCAACTTTCCCTT
TCTTTCTTCATGTTACCCATTGAAACATGCGCTTTGATTCCCATCTCACC
CCAGGCATGCTTCATTACAGGCATGCTGCCGGCATGGCAAACATTCCTTG
CGATACGGAACTGTTGGAGAAAGAATAGCGTGAAAGCCTGTCCAGCTGAA
TTTCTAAGCTTCGCGAAAGCCTTGCAGCCAAACATCAGCTATGTCACGAA
AGGAGTGGCAGACTTGTCGTACGAACGATTGGAGTTCCTCGGAGACGCTG
TTCTGAAAGTCCTTTTCTCTATGGTTGCTTTTGTTGGCAATCCAGAAGAA
AGTGAAGGAATTTTGAGCGATATAAGAGATATCGAGGTAAGCAATCAACG
TTTGGCTGACTTAGCTATACAAATGAAGCTTCATGATTGCGTTGCTTTCT
CTGGGGTTTCTCAAAATGTCAAATCTTGGCCATGGTTTTGGGCATCTCAG
TCCGGAGACCAAATCAGGATATCGGAAAAAGTGCTCGCAGATTGTGTTGA
AGCACTGCTTGGCGTTCAATATCTTTATGGCGGTCTTGAACTCGTAACTG
CCTTTGTCGACAAGCACAATCTTATGCCCGGGGCCTGTCGAGTTCTTGGG
TATACCACAACATCACACGTAAACACTCTTGTGCTACCAGTCCCACCTAT
GGCCTCTGGTGACGATAGATACGAGTCAGACGCGTTAAAAGAAATCGAAG
ACATTCTTGGCTACAAATTCAGGGACAGGCGGCATTTGGTAATCGCACTG
ACACATGGTAGTTTTGAAAACGGTCATATCACATCTTATCAACGATATGA
GTATTTGGGTGACGCTATTATAGGCTTTCTTCTTCTATCTCATTTCTTCA
ATGAATATCCGAATTTCAGCCCTGGCGAATTGACTTCTCTCCGCGGACCA
GCCTTAAGCAATGACTTATTTGCCAGAGTCATCGTGTCGAAAGGAATCCA
TCGCAAATTCTGGTACGATTGCTTGCCTTTGAAAAAAGAAATCGAAAGAT
TCGTAAACCTCGTGGCAAACGAAGAGGATGATGAGGAAGATGTTTGCAAG
ACAATGACGGTGCCAAAAGTCCTGGGAGATTTGTTAGAGTCCATTATCGG
TGCTATTGTTGTTGACAAAGGCATGAGATTTGATGGTGTGCAAGACATTG
TGTTGCGATTAATGGAGGACGAACTCAATCGATTTGCCAATCCAAGCAAG
TTCAGACGCAACCCAATATCCGAGCTAGTCTGCATAGTTCAGAAGAGATT
CCGGACCAAAGGCCCTAGATATGAATACCTCGACGAAAGTAATGATATGC
AGAAGATTTGTGTTGTTTCCGTTGAAAACCAGGAACTAGGGAAAGGTTTT
GGGCCAACTAGAAGAATCGCTAGACGACACGCCTCGATTGTTGCCCTCAA
TAAGCTTTTGGAATCAACTGTTGAGGACTTGGAAAAGGGTGACCAACAAA
TTGAGGACTGCTCGAACGACGAGGACATGATCCCTTCTTCGGAAAACATA
TGA

protein sequence of Gvermi11673.t1

>Gvermi11673.t1 ID=Gvermi11673.t1|Name=Gvermi11673.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=1751bp
MSVSSDSDSVVEPLSHSRPQRNRRRRRFHKRSWPSDVRFTLKWGSDSDSS
DSEPLPKESGTGKSNSTAFPSLPLLNMEQNLDEACTSLRSGGPSYSAPAL
LPNQSPPTAHPEEALIPRRYQLEILRQAKETNIIAVLETGAGKTLVAALL
VKETLRSLNNPEMVDKTNLSFSLLPHVSPSYGVVSPRIVSAVEPNVDASH
EAISSLHTTQNADPDPSLGSDFQQNMSELLSSSNESMESAAMDNDILEAT
QVQRVEPSNCSVSSGVAPHLLEENRPGFIAPLANGSNVMGPPYDATDLSS
SISEPSVKNNPNSISALFHRNKNTALRKQIVFLVHRVALVPQQAKVLRSV
IPPEHRVALFYGEKSGDEWSSSEWIFKLRSKTVLVMTAQILLNLLRHGIL
DMQNLALLILDEVHHATGNHPYSRIFVEFYHTIPQGRPRPRVFGMTATPV
KRKAQAKSEEHCLHGICALEATLDANIVTVSDDHHEEFHEHVPKPEELVL
QYKGTQDNEEVYEFSDYDLESRVLSKFENDSSSDTCGVRDVKDSGSDEGK
PKPCDIENGDCALQADEMKVIHHICRKLGLMAAHGFAVRLCKASGVDQQK
VMDELLPECIPTQIETGGMPEKVSKLLDLLCSEWLRYEEDAKASHAAADG
FRCIVFIHERSCALALAWLINEVFQHMNTKALQASSVVGCQSNESIVRMS
RSKLLRTVNEFRNGGFGVLVATNVVEEGLNVPTCRLVVSFDDIKSPTAYV
QARGRARRKNSKYVVFLDENDKKCSQAFLDARRGATLMSQVSKRNRLSKK
EKESIRASFLADNIVEEDVLYSRTTNAKVDPTQAVCLLEKYCNMKASQWN
VDNARPKYQATEVSTGILATVKINEKSGIDGGCCNEPKKNELLARRYAAL
DAYKKLYEIGEVDAYLLPRRPPRSLRVLRSPGLKSDKRLRIQPVKGHRRR
CREVQSKASKKDKRVRRCNILHPSVLQLEASENVQKIQTLDEKENAAAKS
VQADPVQRSTLTLNMRVDKVPRKFLMYIVKLDCDMSKMAWYEEYKEEHYA
LLVREQLLDEDLTAVRCPTGQSMFTLKYHKEIEWSADLHTRAQKYVLFLQ
LCLWGRTPGSSRALEVEVGEKVKGSIAGFLLMPLKKDAANHYDVDWKSVD
HAISLTWKKKRNEEGNTASPHHYEHALVCSSHENFDRVYLSGCVDDSIRA
DSSVEGYLNPNTFKSFVDYYRLRHKLVIKDSKQPMLPGASVRSTMNQLSL
SFFMLPIETCALIPISPQACFITGMLPAWQTFLAIRNCWRKNSVKACPAE
FLSFAKALQPNISYVTKGVADLSYERLEFLGDAVLKVLFSMVAFVGNPEE
SEGILSDIRDIEVSNQRLADLAIQMKLHDCVAFSGVSQNVKSWPWFWASQ
SGDQIRISEKVLADCVEALLGVQYLYGGLELVTAFVDKHNLMPGACRVLG
YTTTSHVNTLVLPVPPMASGDDRYESDALKEIEDILGYKFRDRRHLVIAL
THGSFENGHITSYQRYEYLGDAIIGFLLLSHFFNEYPNFSPGELTSLRGP
ALSNDLFARVIVSKGIHRKFWYDCLPLKKEIERFVNLVANEEDDEEDVCK
TMTVPKVLGDLLESIIGAIVVDKGMRFDGVQDIVLRLMEDELNRFANPSK
FRRNPISELVCIVQKRFRTKGPRYEYLDESNDMQKICVVSVENQELGKGF
GPTRRIARRHASIVALNKLLESTVEDLEKGDQQIEDCSNDEDMIPSSENI
*

mRNA from alignment at ScGOVlb_3404:1603344..1608596-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gvermi11673.t1 ID=Gvermi11673.t1|Name=Gvermi11673.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=5253bp|location=Sequence derived from alignment at ScGOVlb_3404:1603344..1608596- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGAGTGTCTCGTCTGATTCGGACTCCGTAGTCGAACCGCTTTCTCATTC
GCGGCCGCAACGTAACCGACGTCGTCGACGTTTTCATAAACGTTCATGGC
CTTCGGATGTACGTTTCACGCTCAAATGGGGTTCTGATTCAGATTCTTCC
GATTCTGAACCGTTACCAAAAGAATCTGGCACAGGTAAAAGCAATTCGAC
AGCATTCCCCAGTCTTCCACTGTTAAACATGGAACAGAATTTAGATGAGG
CATGCACATCGTTGCGGTCTGGAGGCCCAAGTTATTCTGCCCCAGCTCTG
CTTCCAAACCAAAGCCCACCAACTGCACATCCAGAAGAAGCTCTCATTCC
GCGTCGCTATCAGTTGGAAATCCTTCGGCAAGCCAAGGAAACCAACATCA
TAGCCGTCCTTGAAACAGGCGCCGGAAAAACGCTCGTAGCAGCTCTTCTT
GTTAAGGAAACGCTTCGATCGCTTAATAACCCTGAGATGGTGGACAAAAC
TAATCTTTCTTTCTCACTGCTTCCGCATGTATCCCCATCTTATGGAGTCG
TATCGCCGCGAATCGTATCAGCTGTGGAACCGAATGTTGATGCATCTCAC
GAAGCCATCTCATCTTTGCATACTACTCAAAATGCAGATCCTGACCCAAG
TCTGGGGTCGGATTTTCAACAAAACATGTCTGAGCTGTTGAGCAGCTCAA
ATGAGTCTATGGAAAGCGCTGCAATGGACAACGATATCCTTGAAGCGACT
CAAGTGCAAAGGGTCGAGCCTTCAAACTGTTCAGTATCCTCCGGAGTTGC
GCCACATTTGCTTGAGGAAAATCGTCCGGGATTTATCGCCCCGCTTGCAA
ATGGTTCCAATGTCATGGGGCCCCCCTACGATGCCACTGACTTGAGCAGC
TCTATCAGTGAGCCTTCAGTTAAGAACAACCCGAATTCAATTTCTGCCTT
GTTCCACAGAAACAAGAACACCGCTCTCCGAAAGCAAATTGTATTTCTGG
TACACCGTGTCGCCCTGGTTCCGCAGCAAGCCAAGGTGCTGCGGTCGGTA
ATACCGCCTGAGCATCGTGTAGCTCTCTTCTATGGTGAGAAAAGCGGAGA
TGAATGGTCTTCTTCGGAATGGATTTTCAAACTGCGATCGAAAACTGTCT
TGGTAATGACAGCACAAATTCTTCTAAATCTACTCCGTCACGGTATCCTC
GACATGCAAAACTTGGCACTTCTAATTCTTGATGAAGTACATCATGCCAC
TGGAAATCATCCTTACAGCCGTATTTTTGTCGAGTTCTATCACACGATTC
CACAAGGTCGCCCCCGTCCTCGTGTATTTGGAATGACAGCTACTCCAGTA
AAACGCAAAGCTCAAGCGAAATCAGAAGAGCATTGTTTGCACGGAATATG
CGCATTAGAAGCTACATTGGACGCCAACATTGTTACTGTCTCCGATGATC
ACCACGAGGAGTTTCATGAGCATGTTCCGAAACCGGAAGAACTTGTCTTA
CAATACAAGGGAACTCAGGATAATGAAGAAGTTTATGAATTCAGCGACTA
TGACCTCGAGTCAAGGGTTCTTTCCAAGTTTGAAAATGATTCCAGCTCAG
ATACTTGCGGGGTGCGAGACGTAAAGGACTCGGGCAGCGATGAAGGGAAG
CCGAAACCATGTGATATAGAAAACGGAGATTGTGCACTCCAAGCAGATGA
GATGAAAGTCATTCATCATATTTGTCGAAAACTTGGGCTTATGGCTGCTC
ATGGCTTTGCAGTGCGTCTATGCAAAGCATCTGGAGTGGATCAACAAAAA
GTTATGGACGAATTGCTCCCTGAATGCATCCCAACACAAATTGAAACCGG
CGGAATGCCAGAGAAAGTGTCAAAACTTCTCGACCTTCTATGTTCAGAAT
GGTTGAGATACGAAGAGGACGCAAAAGCTTCCCATGCAGCGGCAGACGGG
TTTCGGTGCATTGTTTTCATTCACGAGCGGAGCTGTGCACTCGCGCTGGC
ATGGCTAATCAATGAAGTGTTTCAGCACATGAATACGAAGGCACTCCAAG
CCAGCTCCGTTGTCGGCTGTCAAAGCAACGAGTCCATAGTACGAATGTCG
CGTTCAAAGTTATTACGAACTGTTAATGAGTTTCGGAACGGAGGTTTTGG
CGTTCTTGTGGCCACAAATGTTGTTGAGGAAGGACTAAATGTTCCCACTT
GCCGCCTTGTGGTCTCTTTTGATGATATTAAGTCCCCAACGGCATATGTT
CAAGCTCGAGGGAGAGCTAGGAGAAAAAACTCTAAATATGTTGTCTTCTT
GGATGAGAATGACAAAAAGTGTTCTCAGGCGTTCCTTGATGCGAGACGTG
GTGCCACCTTGATGAGCCAAGTATCAAAAAGAAATCGCCTCTCTAAGAAA
GAAAAAGAATCGATTCGCGCTAGCTTTTTGGCGGATAATATTGTCGAAGA
GGATGTGTTATATTCACGTACCACCAATGCGAAAGTTGATCCGACACAAG
CAGTTTGCTTGCTTGAAAAGTATTGCAACATGAAAGCTTCGCAGTGGAAT
GTCGATAACGCAAGGCCAAAGTACCAAGCAACTGAAGTATCAACTGGGAT
TCTAGCAACCGTGAAAATTAACGAGAAGTCCGGCATCGATGGCGGATGCT
GTAACGAACCAAAGAAAAACGAACTTCTTGCGCGTAGATATGCGGCTCTG
GATGCATATAAAAAGCTATATGAAATAGGAGAAGTGGACGCCTACCTTTT
ACCTCGACGTCCACCTCGATCGCTGCGTGTGCTCCGAAGCCCTGGACTAA
AATCGGATAAAAGATTGCGAATTCAACCCGTTAAAGGTCATCGACGCCGA
TGCCGAGAGGTGCAATCAAAGGCGTCCAAGAAAGATAAACGTGTTCGCCG
ATGTAACATACTTCATCCGAGCGTGTTGCAGCTTGAGGCTTCCGAGAATG
TGCAAAAGATACAGACCTTGGATGAGAAAGAAAATGCGGCTGCGAAGAGT
GTACAAGCAGATCCGGTTCAACGATCGACATTAACTCTTAACATGAGGGT
AGACAAAGTCCCAAGGAAATTCCTCATGTATATCGTCAAGCTTGACTGCG
ATATGTCAAAAATGGCGTGGTACGAGGAATATAAGGAAGAGCATTATGCA
CTTCTTGTCCGAGAACAGCTTTTGGATGAAGATCTGACAGCCGTGCGATG
TCCTACTGGACAAAGTATGTTCACTCTGAAATATCATAAGGAGATCGAAT
GGTCCGCTGATCTTCATACCAGGGCACAGAAATATGTGCTATTTTTGCAG
TTATGTCTATGGGGTCGCACACCTGGCTCGTCGAGGGCACTCGAAGTTGA
GGTCGGGGAAAAGGTGAAAGGTTCGATTGCTGGTTTTTTGCTCATGCCAC
TCAAAAAGGACGCAGCCAATCACTACGATGTGGACTGGAAGTCGGTAGAT
CACGCCATCAGTCTCACATGGAAAAAGAAACGAAATGAGGAGGGCAACAC
AGCGAGTCCTCACCATTACGAACATGCCCTCGTATGTTCTTCCCATGAGA
ATTTCGATCGCGTCTACTTGAGCGGATGCGTTGATGACAGTATTAGGGCA
GATTCTTCTGTTGAAGGTTACCTCAATCCCAATACGTTCAAGTCATTTGT
GGATTACTACCGATTGAGGCATAAGTTGGTTATCAAAGACAGCAAACAAC
CGATGCTGCCTGGAGCAAGTGTTAGGAGCACCATGAACCAACTTTCCCTT
TCTTTCTTCATGTTACCCATTGAAACATGCGCTTTGATTCCCATCTCACC
CCAGGCATGCTTCATTACAGGCATGCTGCCGGCATGGCAAACATTCCTTG
CGATACGGAACTGTTGGAGAAAGAATAGCGTGAAAGCCTGTCCAGCTGAA
TTTCTAAGCTTCGCGAAAGCCTTGCAGCCAAACATCAGCTATGTCACGAA
AGGAGTGGCAGACTTGTCGTACGAACGATTGGAGTTCCTCGGAGACGCTG
TTCTGAAAGTCCTTTTCTCTATGGTTGCTTTTGTTGGCAATCCAGAAGAA
AGTGAAGGAATTTTGAGCGATATAAGAGATATCGAGGTAAGCAATCAACG
TTTGGCTGACTTAGCTATACAAATGAAGCTTCATGATTGCGTTGCTTTCT
CTGGGGTTTCTCAAAATGTCAAATCTTGGCCATGGTTTTGGGCATCTCAG
TCCGGAGACCAAATCAGGATATCGGAAAAAGTGCTCGCAGATTGTGTTGA
AGCACTGCTTGGCGTTCAATATCTTTATGGCGGTCTTGAACTCGTAACTG
CCTTTGTCGACAAGCACAATCTTATGCCCGGGGCCTGTCGAGTTCTTGGG
TATACCACAACATCACACGTAAACACTCTTGTGCTACCAGTCCCACCTAT
GGCCTCTGGTGACGATAGATACGAGTCAGACGCGTTAAAAGAAATCGAAG
ACATTCTTGGCTACAAATTCAGGGACAGGCGGCATTTGGTAATCGCACTG
ACACATGGTAGTTTTGAAAACGGTCATATCACATCTTATCAACGATATGA
GTATTTGGGTGACGCTATTATAGGCTTTCTTCTTCTATCTCATTTCTTCA
ATGAATATCCGAATTTCAGCCCTGGCGAATTGACTTCTCTCCGCGGACCA
GCCTTAAGCAATGACTTATTTGCCAGAGTCATCGTGTCGAAAGGAATCCA
TCGCAAATTCTGGTACGATTGCTTGCCTTTGAAAAAAGAAATCGAAAGAT
TCGTAAACCTCGTGGCAAACGAAGAGGATGATGAGGAAGATGTTTGCAAG
ACAATGACGGTGCCAAAAGTCCTGGGAGATTTGTTAGAGTCCATTATCGG
TGCTATTGTTGTTGACAAAGGCATGAGATTTGATGGTGTGCAAGACATTG
TGTTGCGATTAATGGAGGACGAACTCAATCGATTTGCCAATCCAAGCAAG
TTCAGACGCAACCCAATATCCGAGCTAGTCTGCATAGTTCAGAAGAGATT
CCGGACCAAAGGCCCTAGATATGAATACCTCGACGAAAGTAATGATATGC
AGAAGATTTGTGTTGTTTCCGTTGAAAACCAGGAACTAGGGAAAGGTTTT
GGGCCAACTAGAAGAATCGCTAGACGACACGCCTCGATTGTTGCCCTCAA
TAAGCTTTTGGAATCAACTGTTGAGGACTTGGAAAAGGGTGACCAACAAA
TTGAGGACTGCTCGAACGACGAGGACATGATCCCTTCTTCGGAAAACATA
TGA

Coding sequence (CDS) from alignment at ScGOVlb_3404:1603344..1608596-

>Gvermi11673.t1 ID=Gvermi11673.t1|Name=Gvermi11673.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=5253bp|location=Sequence derived from alignment at ScGOVlb_3404:1603344..1608596- (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
ATGAGTGTCTCGTCTGATTCGGACTCCGTAGTCGAACCGCTTTCTCATTC
GCGGCCGCAACGTAACCGACGTCGTCGACGTTTTCATAAACGTTCATGGC
CTTCGGATGTACGTTTCACGCTCAAATGGGGTTCTGATTCAGATTCTTCC
GATTCTGAACCGTTACCAAAAGAATCTGGCACAGGTAAAAGCAATTCGAC
AGCATTCCCCAGTCTTCCACTGTTAAACATGGAACAGAATTTAGATGAGG
CATGCACATCGTTGCGGTCTGGAGGCCCAAGTTATTCTGCCCCAGCTCTG
CTTCCAAACCAAAGCCCACCAACTGCACATCCAGAAGAAGCTCTCATTCC
GCGTCGCTATCAGTTGGAAATCCTTCGGCAAGCCAAGGAAACCAACATCA
TAGCCGTCCTTGAAACAGGCGCCGGAAAAACGCTCGTAGCAGCTCTTCTT
GTTAAGGAAACGCTTCGATCGCTTAATAACCCTGAGATGGTGGACAAAAC
TAATCTTTCTTTCTCACTGCTTCCGCATGTATCCCCATCTTATGGAGTCG
TATCGCCGCGAATCGTATCAGCTGTGGAACCGAATGTTGATGCATCTCAC
GAAGCCATCTCATCTTTGCATACTACTCAAAATGCAGATCCTGACCCAAG
TCTGGGGTCGGATTTTCAACAAAACATGTCTGAGCTGTTGAGCAGCTCAA
ATGAGTCTATGGAAAGCGCTGCAATGGACAACGATATCCTTGAAGCGACT
CAAGTGCAAAGGGTCGAGCCTTCAAACTGTTCAGTATCCTCCGGAGTTGC
GCCACATTTGCTTGAGGAAAATCGTCCGGGATTTATCGCCCCGCTTGCAA
ATGGTTCCAATGTCATGGGGCCCCCCTACGATGCCACTGACTTGAGCAGC
TCTATCAGTGAGCCTTCAGTTAAGAACAACCCGAATTCAATTTCTGCCTT
GTTCCACAGAAACAAGAACACCGCTCTCCGAAAGCAAATTGTATTTCTGG
TACACCGTGTCGCCCTGGTTCCGCAGCAAGCCAAGGTGCTGCGGTCGGTA
ATACCGCCTGAGCATCGTGTAGCTCTCTTCTATGGTGAGAAAAGCGGAGA
TGAATGGTCTTCTTCGGAATGGATTTTCAAACTGCGATCGAAAACTGTCT
TGGTAATGACAGCACAAATTCTTCTAAATCTACTCCGTCACGGTATCCTC
GACATGCAAAACTTGGCACTTCTAATTCTTGATGAAGTACATCATGCCAC
TGGAAATCATCCTTACAGCCGTATTTTTGTCGAGTTCTATCACACGATTC
CACAAGGTCGCCCCCGTCCTCGTGTATTTGGAATGACAGCTACTCCAGTA
AAACGCAAAGCTCAAGCGAAATCAGAAGAGCATTGTTTGCACGGAATATG
CGCATTAGAAGCTACATTGGACGCCAACATTGTTACTGTCTCCGATGATC
ACCACGAGGAGTTTCATGAGCATGTTCCGAAACCGGAAGAACTTGTCTTA
CAATACAAGGGAACTCAGGATAATGAAGAAGTTTATGAATTCAGCGACTA
TGACCTCGAGTCAAGGGTTCTTTCCAAGTTTGAAAATGATTCCAGCTCAG
ATACTTGCGGGGTGCGAGACGTAAAGGACTCGGGCAGCGATGAAGGGAAG
CCGAAACCATGTGATATAGAAAACGGAGATTGTGCACTCCAAGCAGATGA
GATGAAAGTCATTCATCATATTTGTCGAAAACTTGGGCTTATGGCTGCTC
ATGGCTTTGCAGTGCGTCTATGCAAAGCATCTGGAGTGGATCAACAAAAA
GTTATGGACGAATTGCTCCCTGAATGCATCCCAACACAAATTGAAACCGG
CGGAATGCCAGAGAAAGTGTCAAAACTTCTCGACCTTCTATGTTCAGAAT
GGTTGAGATACGAAGAGGACGCAAAAGCTTCCCATGCAGCGGCAGACGGG
TTTCGGTGCATTGTTTTCATTCACGAGCGGAGCTGTGCACTCGCGCTGGC
ATGGCTAATCAATGAAGTGTTTCAGCACATGAATACGAAGGCACTCCAAG
CCAGCTCCGTTGTCGGCTGTCAAAGCAACGAGTCCATAGTACGAATGTCG
CGTTCAAAGTTATTACGAACTGTTAATGAGTTTCGGAACGGAGGTTTTGG
CGTTCTTGTGGCCACAAATGTTGTTGAGGAAGGACTAAATGTTCCCACTT
GCCGCCTTGTGGTCTCTTTTGATGATATTAAGTCCCCAACGGCATATGTT
CAAGCTCGAGGGAGAGCTAGGAGAAAAAACTCTAAATATGTTGTCTTCTT
GGATGAGAATGACAAAAAGTGTTCTCAGGCGTTCCTTGATGCGAGACGTG
GTGCCACCTTGATGAGCCAAGTATCAAAAAGAAATCGCCTCTCTAAGAAA
GAAAAAGAATCGATTCGCGCTAGCTTTTTGGCGGATAATATTGTCGAAGA
GGATGTGTTATATTCACGTACCACCAATGCGAAAGTTGATCCGACACAAG
CAGTTTGCTTGCTTGAAAAGTATTGCAACATGAAAGCTTCGCAGTGGAAT
GTCGATAACGCAAGGCCAAAGTACCAAGCAACTGAAGTATCAACTGGGAT
TCTAGCAACCGTGAAAATTAACGAGAAGTCCGGCATCGATGGCGGATGCT
GTAACGAACCAAAGAAAAACGAACTTCTTGCGCGTAGATATGCGGCTCTG
GATGCATATAAAAAGCTATATGAAATAGGAGAAGTGGACGCCTACCTTTT
ACCTCGACGTCCACCTCGATCGCTGCGTGTGCTCCGAAGCCCTGGACTAA
AATCGGATAAAAGATTGCGAATTCAACCCGTTAAAGGTCATCGACGCCGA
TGCCGAGAGGTGCAATCAAAGGCGTCCAAGAAAGATAAACGTGTTCGCCG
ATGTAACATACTTCATCCGAGCGTGTTGCAGCTTGAGGCTTCCGAGAATG
TGCAAAAGATACAGACCTTGGATGAGAAAGAAAATGCGGCTGCGAAGAGT
GTACAAGCAGATCCGGTTCAACGATCGACATTAACTCTTAACATGAGGGT
AGACAAAGTCCCAAGGAAATTCCTCATGTATATCGTCAAGCTTGACTGCG
ATATGTCAAAAATGGCGTGGTACGAGGAATATAAGGAAGAGCATTATGCA
CTTCTTGTCCGAGAACAGCTTTTGGATGAAGATCTGACAGCCGTGCGATG
TCCTACTGGACAAAGTATGTTCACTCTGAAATATCATAAGGAGATCGAAT
GGTCCGCTGATCTTCATACCAGGGCACAGAAATATGTGCTATTTTTGCAG
TTATGTCTATGGGGTCGCACACCTGGCTCGTCGAGGGCACTCGAAGTTGA
GGTCGGGGAAAAGGTGAAAGGTTCGATTGCTGGTTTTTTGCTCATGCCAC
TCAAAAAGGACGCAGCCAATCACTACGATGTGGACTGGAAGTCGGTAGAT
CACGCCATCAGTCTCACATGGAAAAAGAAACGAAATGAGGAGGGCAACAC
AGCGAGTCCTCACCATTACGAACATGCCCTCGTATGTTCTTCCCATGAGA
ATTTCGATCGCGTCTACTTGAGCGGATGCGTTGATGACAGTATTAGGGCA
GATTCTTCTGTTGAAGGTTACCTCAATCCCAATACGTTCAAGTCATTTGT
GGATTACTACCGATTGAGGCATAAGTTGGTTATCAAAGACAGCAAACAAC
CGATGCTGCCTGGAGCAAGTGTTAGGAGCACCATGAACCAACTTTCCCTT
TCTTTCTTCATGTTACCCATTGAAACATGCGCTTTGATTCCCATCTCACC
CCAGGCATGCTTCATTACAGGCATGCTGCCGGCATGGCAAACATTCCTTG
CGATACGGAACTGTTGGAGAAAGAATAGCGTGAAAGCCTGTCCAGCTGAA
TTTCTAAGCTTCGCGAAAGCCTTGCAGCCAAACATCAGCTATGTCACGAA
AGGAGTGGCAGACTTGTCGTACGAACGATTGGAGTTCCTCGGAGACGCTG
TTCTGAAAGTCCTTTTCTCTATGGTTGCTTTTGTTGGCAATCCAGAAGAA
AGTGAAGGAATTTTGAGCGATATAAGAGATATCGAGGTAAGCAATCAACG
TTTGGCTGACTTAGCTATACAAATGAAGCTTCATGATTGCGTTGCTTTCT
CTGGGGTTTCTCAAAATGTCAAATCTTGGCCATGGTTTTGGGCATCTCAG
TCCGGAGACCAAATCAGGATATCGGAAAAAGTGCTCGCAGATTGTGTTGA
AGCACTGCTTGGCGTTCAATATCTTTATGGCGGTCTTGAACTCGTAACTG
CCTTTGTCGACAAGCACAATCTTATGCCCGGGGCCTGTCGAGTTCTTGGG
TATACCACAACATCACACGTAAACACTCTTGTGCTACCAGTCCCACCTAT
GGCCTCTGGTGACGATAGATACGAGTCAGACGCGTTAAAAGAAATCGAAG
ACATTCTTGGCTACAAATTCAGGGACAGGCGGCATTTGGTAATCGCACTG
ACACATGGTAGTTTTGAAAACGGTCATATCACATCTTATCAACGATATGA
GTATTTGGGTGACGCTATTATAGGCTTTCTTCTTCTATCTCATTTCTTCA
ATGAATATCCGAATTTCAGCCCTGGCGAATTGACTTCTCTCCGCGGACCA
GCCTTAAGCAATGACTTATTTGCCAGAGTCATCGTGTCGAAAGGAATCCA
TCGCAAATTCTGGTACGATTGCTTGCCTTTGAAAAAAGAAATCGAAAGAT
TCGTAAACCTCGTGGCAAACGAAGAGGATGATGAGGAAGATGTTTGCAAG
ACAATGACGGTGCCAAAAGTCCTGGGAGATTTGTTAGAGTCCATTATCGG
TGCTATTGTTGTTGACAAAGGCATGAGATTTGATGGTGTGCAAGACATTG
TGTTGCGATTAATGGAGGACGAACTCAATCGATTTGCCAATCCAAGCAAG
TTCAGACGCAACCCAATATCCGAGCTAGTCTGCATAGTTCAGAAGAGATT
CCGGACCAAAGGCCCTAGATATGAATACCTCGACGAAAGTAATGATATGC
AGAAGATTTGTGTTGTTTCCGTTGAAAACCAGGAACTAGGGAAAGGTTTT
GGGCCAACTAGAAGAATCGCTAGACGACACGCCTCGATTGTTGCCCTCAA
TAAGCTTTTGGAATCAACTGTTGAGGACTTGGAAAAGGGTGACCAACAAA
TTGAGGACTGCTCGAACGACGAGGACATGATCCCTTCTTCGGAAAACATA
TGA