Ggra9290.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9290.t1
Unique NameGgra9290.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length149
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000190_piloncontigtig00000190_pilon:92863..93309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9290Ggra9290Gracilaria gracilis GNS1m malegenetig00000190_pilon 92863..93309 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9290.t1.start1Ggra9290.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000190_pilon 92863..92865 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9290.t1.CDS1Ggra9290.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000190_pilon 92863..93309 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9290.t1.exon1Ggra9290.t1.exon1Gracilaria gracilis GNS1m maleexontig00000190_pilon 92863..93309 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9290.t1.stop1Ggra9290.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000190_pilon 93307..93309 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9290.t1Ggra9290.t1Gracilaria gracilis GNS1m malepolypeptidetig00000190_pilon 92863..93309 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9290.t1 ID=Ggra9290.t1|Name=Ggra9290.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=149bp
MPPFRMALLCHPATVRWFRGIDWEAMRLRSRSPVVLSASGADDLFPSRPF
ALPLFASALAMMASPLLCRAALALSASPPFVAHAFRNASAGGLHQLCAPR
AIADYYELLGVARDDSSADVKRCTTVGKGPSSEYLQQGPDTFAQANHD*
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spliced messenger RNA

>Ggra9290.t1 ID=Ggra9290.t1|Name=Ggra9290.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=447bp|location=Sequence derived from alignment at tig00000190_pilon:92863..93309+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCCTTTCAGAATGGCGCTGCTCTGCCACCCTGCCACCGTCCGCTG
GTTCCGCGGGATTGACTGGGAGGCGATGCGTCTGCGCTCGCGCTCCCCGG
TGGTGCTAAGCGCAAGTGGCGCCGACGACCTCTTCCCGTCGCGTCCCTTT
GCGTTACCTTTGTTTGCATCCGCGCTCGCCATGATGGCGTCGCCACTTTT
GTGTCGCGCTGCCCTCGCGCTCTCTGCGTCGCCGCCGTTTGTGGCTCACG
CATTTCGCAATGCGTCGGCTGGCGGGCTCCACCAGCTCTGCGCGCCGCGT
GCCATTGCCGATTACTACGAGCTGCTGGGCGTGGCGCGCGACGACTCGTC
CGCTGATGTCAAGAGGTGTACTACCGTTGGCAAAGGGCCATCATCTGAAT
ATCTCCAACAGGGACCCGACACTTTTGCGCAGGCAAACCACGACTAA
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protein sequence of Ggra9290.t1

>Ggra9290.t1 ID=Ggra9290.t1|Name=Ggra9290.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=149bp
MPPFRMALLCHPATVRWFRGIDWEAMRLRSRSPVVLSASGADDLFPSRPF
ALPLFASALAMMASPLLCRAALALSASPPFVAHAFRNASAGGLHQLCAPR
AIADYYELLGVARDDSSADVKRCTTVGKGPSSEYLQQGPDTFAQANHD*
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mRNA from alignment at tig00000190_pilon:92863..93309+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9290.t1 ID=Ggra9290.t1|Name=Ggra9290.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=447bp|location=Sequence derived from alignment at tig00000190_pilon:92863..93309+ (Gracilaria gracilis GNS1m male)
ATGCCGCCTTTCAGAATGGCGCTGCTCTGCCACCCTGCCACCGTCCGCTG
GTTCCGCGGGATTGACTGGGAGGCGATGCGTCTGCGCTCGCGCTCCCCGG
TGGTGCTAAGCGCAAGTGGCGCCGACGACCTCTTCCCGTCGCGTCCCTTT
GCGTTACCTTTGTTTGCATCCGCGCTCGCCATGATGGCGTCGCCACTTTT
GTGTCGCGCTGCCCTCGCGCTCTCTGCGTCGCCGCCGTTTGTGGCTCACG
CATTTCGCAATGCGTCGGCTGGCGGGCTCCACCAGCTCTGCGCGCCGCGT
GCCATTGCCGATTACTACGAGCTGCTGGGCGTGGCGCGCGACGACTCGTC
CGCTGATGTCAAGAGGTGTACTACCGTTGGCAAAGGGCCATCATCTGAAT
ATCTCCAACAGGGACCCGACACTTTTGCGCAGGCAAACCACGACTAA
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Coding sequence (CDS) from alignment at tig00000190_pilon:92863..93309+

>Ggra9290.t1 ID=Ggra9290.t1|Name=Ggra9290.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=447bp|location=Sequence derived from alignment at tig00000190_pilon:92863..93309+ (Gracilaria gracilis GNS1m male)
ATGCCGCCTTTCAGAATGGCGCTGCTCTGCCACCCTGCCACCGTCCGCTG
GTTCCGCGGGATTGACTGGGAGGCGATGCGTCTGCGCTCGCGCTCCCCGG
TGGTGCTAAGCGCAAGTGGCGCCGACGACCTCTTCCCGTCGCGTCCCTTT
GCGTTACCTTTGTTTGCATCCGCGCTCGCCATGATGGCGTCGCCACTTTT
GTGTCGCGCTGCCCTCGCGCTCTCTGCGTCGCCGCCGTTTGTGGCTCACG
CATTTCGCAATGCGTCGGCTGGCGGGCTCCACCAGCTCTGCGCGCCGCGT
GCCATTGCCGATTACTACGAGCTGCTGGGCGTGGCGCGCGACGACTCGTC
CGCTGATGTCAAGAGGTGTACTACCGTTGGCAAAGGGCCATCATCTGAAT
ATCTCCAACAGGGACCCGACACTTTTGCGCAGGCAAACCACGACTAA
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