Ggra11143.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra11143.t1
Unique NameGgra11143.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length150
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000180_piloncontigtig00000180_pilon:31159..31608 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11143Ggra11143Gracilaria gracilis GNS1m malegenetig00000180_pilon 31159..31608 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11143.t1.stop1Ggra11143.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000180_pilon 31159..31161 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11143.t1.CDS1Ggra11143.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000180_pilon 31159..31608 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11143.t1.exon1Ggra11143.t1.exon1Gracilaria gracilis GNS1m maleexontig00000180_pilon 31159..31608 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11143.t1.start1Ggra11143.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000180_pilon 31606..31608 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11143.t1Ggra11143.t1Gracilaria gracilis GNS1m malepolypeptidetig00000180_pilon 31159..31608 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra11143.t1 ID=Ggra11143.t1|Name=Ggra11143.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=150bp
MLLLYKAGAAKRASTFSDGAPKLLARRVQFRKEKAERLKKRKRDYEMEKR
KKENSNKKREENLRAADRHVLAARTMCANGASANATIAARQCEQFGSFLA
FYVAKNNLAVPIAKKPVPKGPEVSLLTLEKGCQHLAYTGFRSRLSIERY*
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spliced messenger RNA

>Ggra11143.t1 ID=Ggra11143.t1|Name=Ggra11143.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=450bp|location=Sequence derived from alignment at tig00000180_pilon:31159..31608- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCTTGCTCTACAAAGCAGGAGCCGCAAAGCGTGCGTCGACTTTTTC
AGACGGCGCGCCGAAGCTACTGGCTCGTCGTGTACAATTTCGTAAGGAGA
AAGCGGAACGACTGAAGAAACGGAAGAGGGACTATGAAATGGAGAAACGA
AAGAAGGAAAATTCGAATAAGAAGCGGGAGGAAAACCTTCGTGCTGCAGA
CCGCCATGTATTGGCAGCACGGACCATGTGCGCGAATGGTGCATCTGCTA
ATGCTACGATTGCAGCTCGTCAATGTGAACAGTTTGGGTCATTTCTAGCT
TTTTATGTCGCGAAGAACAATCTGGCTGTACCTATCGCGAAGAAGCCCGT
CCCGAAGGGACCTGAAGTTTCACTGCTGACTCTGGAAAAAGGCTGTCAGC
ACCTCGCCTACACCGGATTTCGGTCGAGGCTCTCAATAGAACGGTACTGA
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protein sequence of Ggra11143.t1

>Ggra11143.t1 ID=Ggra11143.t1|Name=Ggra11143.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=150bp
MLLLYKAGAAKRASTFSDGAPKLLARRVQFRKEKAERLKKRKRDYEMEKR
KKENSNKKREENLRAADRHVLAARTMCANGASANATIAARQCEQFGSFLA
FYVAKNNLAVPIAKKPVPKGPEVSLLTLEKGCQHLAYTGFRSRLSIERY*
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mRNA from alignment at tig00000180_pilon:31159..31608-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra11143.t1 ID=Ggra11143.t1|Name=Ggra11143.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=450bp|location=Sequence derived from alignment at tig00000180_pilon:31159..31608- (Gracilaria gracilis GNS1m male)
ATGCTCTTGCTCTACAAAGCAGGAGCCGCAAAGCGTGCGTCGACTTTTTC
AGACGGCGCGCCGAAGCTACTGGCTCGTCGTGTACAATTTCGTAAGGAGA
AAGCGGAACGACTGAAGAAACGGAAGAGGGACTATGAAATGGAGAAACGA
AAGAAGGAAAATTCGAATAAGAAGCGGGAGGAAAACCTTCGTGCTGCAGA
CCGCCATGTATTGGCAGCACGGACCATGTGCGCGAATGGTGCATCTGCTA
ATGCTACGATTGCAGCTCGTCAATGTGAACAGTTTGGGTCATTTCTAGCT
TTTTATGTCGCGAAGAACAATCTGGCTGTACCTATCGCGAAGAAGCCCGT
CCCGAAGGGACCTGAAGTTTCACTGCTGACTCTGGAAAAAGGCTGTCAGC
ACCTCGCCTACACCGGATTTCGGTCGAGGCTCTCAATAGAACGGTACTGA
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Coding sequence (CDS) from alignment at tig00000180_pilon:31159..31608-

>Ggra11143.t1 ID=Ggra11143.t1|Name=Ggra11143.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=450bp|location=Sequence derived from alignment at tig00000180_pilon:31159..31608- (Gracilaria gracilis GNS1m male)
ATGCTCTTGCTCTACAAAGCAGGAGCCGCAAAGCGTGCGTCGACTTTTTC
AGACGGCGCGCCGAAGCTACTGGCTCGTCGTGTACAATTTCGTAAGGAGA
AAGCGGAACGACTGAAGAAACGGAAGAGGGACTATGAAATGGAGAAACGA
AAGAAGGAAAATTCGAATAAGAAGCGGGAGGAAAACCTTCGTGCTGCAGA
CCGCCATGTATTGGCAGCACGGACCATGTGCGCGAATGGTGCATCTGCTA
ATGCTACGATTGCAGCTCGTCAATGTGAACAGTTTGGGTCATTTCTAGCT
TTTTATGTCGCGAAGAACAATCTGGCTGTACCTATCGCGAAGAAGCCCGT
CCCGAAGGGACCTGAAGTTTCACTGCTGACTCTGGAAAAAGGCTGTCAGC
ACCTCGCCTACACCGGATTTCGGTCGAGGCTCTCAATAGAACGGTACTGA
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