Ggra865.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra865.t1
Unique NameGgra865.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length241
Homology
BLAST of Ggra865.t1 vs. uniprot
Match: A0A2V3IIR1 (Trehalose-phosphate phosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIR1_9FLOR)

HSP 1 Score: 169 bits (428), Expect = 1.960e-48
Identity = 93/204 (45.59%), Postives = 122/204 (59.80%), Query Frame = 0
Query:   39 RTLALLVDVDKTTCDTRQFQGGTPKIRAGIQTACHTHAG-GHAIALISGRTEHRLQNATGDSFPLAARHGRALVLSSREVVLVGPPVDLRAEIRAVEEF-ANLLNVPFWNDGDSVEIGFQGGREGLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGMTLDYFMDNDPRFSDTFVLYFGDDLNDIPAGRAAQRRGGL 240
            R  A L DVDKTT DT+Q QGGT ++R GI +ACH   G GH +  ISGR EHRL  AT   FP+ +RHGR L+ S    + VGP V++  E      F A+  ++ ++ D +S EIGFQ   E +K  V  FM  +V+ RP +L LLPLK V E++     KG  +  F+ +DP F     +YFGDD+ D PAGRA Q  GG+
Sbjct:   25 RRFAFLFDVDKTTADTQQLQGGTVRVRGGIISACHLLVGKGHGVGFISGRVEHRLLAATAGFFPIGSRHGRDLIFSDGSRMHVGPIVNVEREKEIARAFVASRRDLIYFEDKESFEIGFQNA-EHVKGQVNAFMESVVRDRP-DLTLLPLKMVYEVVGKDANKGEAVKAFLRHDPMFRGKLPVYFGDDVGDYPAGRAVQEMGGI 226          
BLAST of Ggra865.t1 vs. uniprot
Match: A0A6S6QSR4 (Trehalose 6-phosphate phosphatase n=1 Tax=Terrihabitans soli TaxID=708113 RepID=A0A6S6QSR4_9HYPH)

HSP 1 Score: 58.2 bits (139), Expect = 1.750e-6
Identity = 62/209 (29.67%), Postives = 90/209 (43.06%), Query Frame = 0
Query:   41 LALLVDVDKTTCDTRQFQGGT---PKIRAGIQTACHTHAGGHAIALISGRTEHRLQNATGD-SFPLAARHGRALVLSSREVVLVGPPV--DLRAEIRAVEEFA----NLLNVPFWNDGDSVEIGFQGGREGLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGMTLDYFMDNDPRFSDTFVLYFGDDLNDIPAGRAAQRRGG 239
            LAL +DVD T  D           PK+   ++       G  A+AL++GR    +         P+A  HG  L  +  +  L G P+  +L      ++ FA     LL  P    G +V I ++     L   VE F+R +V R    L++ P K V E+ P  + KG  +  F++ +P    T  L  GDD  D P  R A  RGG
Sbjct:   28 LALFLDVDGTLIDIAPSPDLVVIPPKLIPLLERLSLKLGG--ALALVTGREIGVVDTMFAPLKLPVAGVHGAELRFA--DGTLKGTPIHPELARITEELKTFAAENEGLLVEP---KGRAVAIHYRLN-PALGEDVEAFVREVVDRGTDGLEIQPGKMVVEVRPAKIDKGRAIGVFLETEPYVGRT-PLVIGDDWTDEPGFRTANARGG 227          
BLAST of Ggra865.t1 vs. uniprot
Match: A0A840I5Q6 (Trehalose 6-phosphate phosphatase n=1 Tax=Parvularcula dongshanensis TaxID=1173995 RepID=A0A840I5Q6_9PROT)

HSP 1 Score: 56.6 bits (135), Expect = 5.410e-6
Identity = 61/214 (28.50%), Postives = 88/214 (41.12%), Query Frame = 0
Query:   30 PPHSFEPSRRTLALLVDVDKTTCDTRQFQGGT--PKIRAGIQTACHTHAGGHAIALISGRTEHRLQNATGDSFPLAARHGRALVLS--SREVVLVGPPVDLRAEIRAVEEFANLLNVPFWNDGDSVEIGFQGGREGLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGMTLDYFMDNDPRFSDTFVLYFGDDLNDIPAGRAAQRRGG 239
            PPH F       AL +D D T    +        P+  A +  A     GG A+ALISGR    L      S   A  HG  ++    S    L   P DL   +RA E  A+     F  +  +V           +P V   +R L  +  +  +L   K+V E+ P G+ KG+ ++  M++ P F+    ++FGDD  D       QR GG
Sbjct:   11 PPHDFLSG---AALFLDFDGTLSPLQDDANAVWLPEGGAEMLDALEKALGG-ALALISGRDGRDLSRRVPTSLWRAGNHGNMVLAPGVSEPGTLPEAPADL---LRAAEAIAHANRGVFVEEKAAVLAIHTRANPEAEPAVLDALRGLAAKT-EGYKLQHGKRVIELKPVGMDKGVAIERLMEDAP-FAGRRPVFFGDDATDEDGFAVVQRLGG 215          
The following BLAST results are available for this feature:
BLAST of Ggra865.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IIR11.960e-4845.59Trehalose-phosphate phosphatase n=1 Tax=Gracilario... [more]
A0A6S6QSR41.750e-629.67Trehalose 6-phosphate phosphatase n=1 Tax=Terrihab... [more]
A0A840I5Q65.410e-628.50Trehalose 6-phosphate phosphatase n=1 Tax=Parvular... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 69..227
e-value: 1.1E-5
score: 27.2
NoneNo IPR availableGENE3D3.30.70.1020coord: 122..195
e-value: 1.1E-5
score: 27.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..27
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 43..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000178_piloncontigtig00000178_pilon:308159..308881 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra865.t1Ggra865.t1Gracilaria gracilis GNS1m malemRNAtig00000178_pilon 308159..308881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra865.t1 ID=Ggra865.t1|Name=Ggra865.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=241bp
MARRDEAPHLSPQRQWPPPPPRDSPRSWRPPHSFEPSRRTLALLVDVDKT
TCDTRQFQGGTPKIRAGIQTACHTHAGGHAIALISGRTEHRLQNATGDSF
PLAARHGRALVLSSREVVLVGPPVDLRAEIRAVEEFANLLNVPFWNDGDS
VEIGFQGGREGLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKG
MTLDYFMDNDPRFSDTFVLYFGDDLNDIPAGRAAQRRGGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR036412HAD-like_sf