Ggra9060.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9060.t1
Unique NameGgra9060.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1074
Homology
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BLAST of Ggra9060.t1 vs. uniprot
Match: A0A2V3J0V5 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V5_9FLOR)

HSP 1 Score: 114 bits (285), Expect = 3.130e-25
Identity = 83/189 (43.92%), Postives = 100/189 (52.91%), Query Frame = 0 
Query:  830 VLSATSDEAIASITLNDGERVGVADIISTAVADALRIGGWLALAVRLAVTNEIKGVTGEVEGIPEKVKVVLGASDTISIMSEGATKSRALAEGDGVGVEEIKKTAVDDAVEFPGPLALGSVEIPADPNGLRETPIDMLTIGVAEILPKLTAMLADGNTETATLGTGEDTSIPLDGLAEDRRGALALGVL 1018
            ++S +SD     + L DGE  GV     TAV DAL IG  LAL + +   +EI G+  + +GIP+K K+VLGASDTIS+ SEGATKS  LAEGDGVG    ++                     AD  GL +   D LT+GV E LP LT  L D  TET TL   E  S   D  AE    A  LGVL
Sbjct:    1 MISVSSDGEPVPVLLADGELRGVELNSRTAVVDALDIGNLLALGLWMIAPDEIDGLAEDAKGIPDKDKLVLGASDTISVTSEGATKSPELAEGDGVGRSRYQQHHCSGCT--------------ADLEGLIDIRSDALTLGVPETLPMLTTTLVDAPTETLTLAVEEIVSNHADE-AEGLGDAPMLGVL 174
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BLAST of Ggra9060.t1 vs. uniprot
Match: A0A2V3IFZ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFZ0_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 2.340e-16
Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 0 
Query:  830 VLSATSDEAIASITLNDGERVGVADIISTAVADALRIGGWLALAVRLAVTNEIKGVTGEVEGIPEKVKVVLGASDTISIMSEGATKSRALAEGDGVG 926
            ++S +SD     + L DGE  GV     T V DAL IG  LAL + +   +EI G+  + +GIP+K K+VLGASDTIS+ SEGATKS  LAEGDGVG
Sbjct:    1 MISVSSDGEPVPVLLADGELRGVELNSRTVVVDALDIGNLLALGLWMIAPDEIDGLAEDAKGIPDKDKLVLGASDTISVTSEGATKSPELAEGDGVG 97
The following BLAST results are available for this feature:
BLAST of Ggra9060.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0V53.130e-2543.92Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IFZ02.340e-1652.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:60669..65963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9060.t1Ggra9060.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 60669..65963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9060.t1 ID=Ggra9060.t1|Name=Ggra9060.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1074bp
MKLEAIMSRDGETDGVKGTGRVDTESDICAVVPDGVAEPKPAASLDEIGS
PACGEDDSSSSSTSVNKGSTPDDTAVVCKSSDTSTLLEIDANGVGNILAT
GVAEMKPKAGIPADWESEGVRDMLDTESNGVVEPRAPAVPELLGATDDVT
LGVVDSVLGNSVGRGVTTRLASGESVSDAEEGDVSIRLNVVMASVSEERV
PRESSGFSSPASVEFWAFGSVVSVTKGRFTVDEVVGSMLFGTIGSLVIIG
ANGVTNTLATGIADVTIEKGVPRDGENDGVASVLATESIGFVPDGAADGA
KLGVTSGISTESGAGVIVGSTGSVATVSKTASDGFEAIGSADTPGVARLS
AERVGVKDGVADKNITAVPETRGVGTGLALGVAEIRPTVSAGVSGVVEAG
TPEDSDDGAGEELSAIGISDETGVPNMFVGISDIDSASFDGVTTFVLLSD
GDREGREETNGSIGVGVEDISKTIVADALEIGSSLAFGVFGAPPEDSDGL
VIVPIDALTLGVTRRLSDKLIDGLDDMPIPGSVDGASVPSTMLGENTNGL
AVLGGSDVVSGPSDVAVSSLSLAEGEGVGVDEINIINVAELEDVLGVGVI
VCNGSTWLSDEGKGVSESGMLVVISEGAATSILFGEGESDREDDIGEDDV
NGVADAPGSGSLLATGVGSIVSKTSGISVDVTEDGDGIGLEDMSRTIVAD
ARGIASPLALGAADALSRVSDGLTEAPIVTLTLGEAEALPKAFGEPSAGL
VEISTLFDILPGDPDGLTETPVDGLMMGVCVPDIPPKSTDKVTNGLVDIS
ALGTRDVTSFPFDGLAEGANKMAELGAADVLSATSDEAIASITLNDGERV
GVADIISTAVADALRIGGWLALAVRLAVTNEIKGVTGEVEGIPEKVKVVL
GASDTISIMSEGATKSRALAEGDGVGVEEIKKTAVDDAVEFPGPLALGSV
EIPADPNGLRETPIDMLTIGVAEILPKLTAMLADGNTETATLGTGEDTSI
PLDGLAEDRRGALALGVLGNIPDPSDGLTDVVDTPVLGVDGIVGDPSKLI
EGLVDVFMLGVADVIDVAVWGPY*
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