Ggra9059.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9059.t1
Unique NameGgra9059.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length207
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:59712..60332 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9059Ggra9059Gracilaria gracilis GNS1m malegenetig00000176_pilon 59712..60332 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9059.t1.stop1Ggra9059.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000176_pilon 59712..59714 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9059.t1.CDS1Ggra9059.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000176_pilon 59712..60332 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9059.t1.exon1Ggra9059.t1.exon1Gracilaria gracilis GNS1m maleexontig00000176_pilon 59712..60332 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9059.t1.start1Ggra9059.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000176_pilon 60330..60332 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9059.t1Ggra9059.t1Gracilaria gracilis GNS1m malepolypeptidetig00000176_pilon 59712..60332 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9059.t1 ID=Ggra9059.t1|Name=Ggra9059.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=207bp
MISISPEISAMVTVMPSNVPTPTAVFPAEPTPSVAVSIMIWTPSPDPTVT
DTDLCSNLPSVVPDSSLLARTENFQRVRLTLQVAGPNMTNTCQLKGDVVQ
RFVNLSAMSTLSNAHLWFVTSIEDGPAVYEDGSTLVVVEEELGATESVSP
QVSSSPEGFEELFPGSVIFGITVFLNPFSVELVEAAYVDYVRSQNIVRAL
RRRGSR*
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spliced messenger RNA

>Ggra9059.t1 ID=Ggra9059.t1|Name=Ggra9059.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=621bp|location=Sequence derived from alignment at tig00000176_pilon:59712..60332- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATCTCGATCAGCCCGGAAATTTCGGCCATGGTGACGGTCATGCCGTC
GAACGTGCCAACGCCAACTGCTGTTTTCCCGGCAGAGCCCACTCCCTCCG
TTGCGGTGAGCATTATGATTTGGACGCCATCGCCGGATCCGACTGTGACG
GACACGGATCTATGCTCAAATCTGCCATCGGTCGTGCCGGACTCCTCTCT
TTTGGCAAGGACGGAAAACTTCCAGAGAGTGCGGCTCACACTTCAGGTTG
CAGGTCCGAATATGACCAACACGTGCCAGCTGAAAGGTGATGTTGTTCAG
AGGTTTGTCAACCTGAGCGCTATGAGCACCCTTTCTAATGCTCATCTTTG
GTTTGTTACGTCCATCGAAGATGGACCGGCGGTGTATGAAGATGGGTCGA
CCCTGGTCGTTGTGGAGGAGGAACTCGGGGCGACCGAATCCGTGAGTCCA
CAGGTCTCTTCAAGTCCTGAGGGCTTTGAGGAACTCTTCCCGGGCTCTGT
CATATTTGGGATCACGGTCTTCTTGAATCCGTTTTCGGTTGAGCTTGTGG
AAGCGGCGTACGTAGACTACGTTCGATCGCAAAACATAGTGAGGGCACTG
AGGCGAAGGGGGTCACGATGA
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protein sequence of Ggra9059.t1

>Ggra9059.t1 ID=Ggra9059.t1|Name=Ggra9059.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=207bp
MISISPEISAMVTVMPSNVPTPTAVFPAEPTPSVAVSIMIWTPSPDPTVT
DTDLCSNLPSVVPDSSLLARTENFQRVRLTLQVAGPNMTNTCQLKGDVVQ
RFVNLSAMSTLSNAHLWFVTSIEDGPAVYEDGSTLVVVEEELGATESVSP
QVSSSPEGFEELFPGSVIFGITVFLNPFSVELVEAAYVDYVRSQNIVRAL
RRRGSR*
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mRNA from alignment at tig00000176_pilon:59712..60332-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9059.t1 ID=Ggra9059.t1|Name=Ggra9059.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=621bp|location=Sequence derived from alignment at tig00000176_pilon:59712..60332- (Gracilaria gracilis GNS1m male)
ATGATCTCGATCAGCCCGGAAATTTCGGCCATGGTGACGGTCATGCCGTC
GAACGTGCCAACGCCAACTGCTGTTTTCCCGGCAGAGCCCACTCCCTCCG
TTGCGGTGAGCATTATGATTTGGACGCCATCGCCGGATCCGACTGTGACG
GACACGGATCTATGCTCAAATCTGCCATCGGTCGTGCCGGACTCCTCTCT
TTTGGCAAGGACGGAAAACTTCCAGAGAGTGCGGCTCACACTTCAGGTTG
CAGGTCCGAATATGACCAACACGTGCCAGCTGAAAGGTGATGTTGTTCAG
AGGTTTGTCAACCTGAGCGCTATGAGCACCCTTTCTAATGCTCATCTTTG
GTTTGTTACGTCCATCGAAGATGGACCGGCGGTGTATGAAGATGGGTCGA
CCCTGGTCGTTGTGGAGGAGGAACTCGGGGCGACCGAATCCGTGAGTCCA
CAGGTCTCTTCAAGTCCTGAGGGCTTTGAGGAACTCTTCCCGGGCTCTGT
CATATTTGGGATCACGGTCTTCTTGAATCCGTTTTCGGTTGAGCTTGTGG
AAGCGGCGTACGTAGACTACGTTCGATCGCAAAACATAGTGAGGGCACTG
AGGCGAAGGGGGTCACGATGA
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Coding sequence (CDS) from alignment at tig00000176_pilon:59712..60332-

>Ggra9059.t1 ID=Ggra9059.t1|Name=Ggra9059.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=621bp|location=Sequence derived from alignment at tig00000176_pilon:59712..60332- (Gracilaria gracilis GNS1m male)
ATGATCTCGATCAGCCCGGAAATTTCGGCCATGGTGACGGTCATGCCGTC
GAACGTGCCAACGCCAACTGCTGTTTTCCCGGCAGAGCCCACTCCCTCCG
TTGCGGTGAGCATTATGATTTGGACGCCATCGCCGGATCCGACTGTGACG
GACACGGATCTATGCTCAAATCTGCCATCGGTCGTGCCGGACTCCTCTCT
TTTGGCAAGGACGGAAAACTTCCAGAGAGTGCGGCTCACACTTCAGGTTG
CAGGTCCGAATATGACCAACACGTGCCAGCTGAAAGGTGATGTTGTTCAG
AGGTTTGTCAACCTGAGCGCTATGAGCACCCTTTCTAATGCTCATCTTTG
GTTTGTTACGTCCATCGAAGATGGACCGGCGGTGTATGAAGATGGGTCGA
CCCTGGTCGTTGTGGAGGAGGAACTCGGGGCGACCGAATCCGTGAGTCCA
CAGGTCTCTTCAAGTCCTGAGGGCTTTGAGGAACTCTTCCCGGGCTCTGT
CATATTTGGGATCACGGTCTTCTTGAATCCGTTTTCGGTTGAGCTTGTGG
AAGCGGCGTACGTAGACTACGTTCGATCGCAAAACATAGTGAGGGCACTG
AGGCGAAGGGGGTCACGATGA
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