Ggra4055.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4055.t1
Unique NameGgra4055.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length366
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000173_piloncontigtig00000173_pilon:34635..35732 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4055Ggra4055Gracilaria gracilis GNS1m malegenetig00000173_pilon 34635..35732 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4055.t1.stop1Ggra4055.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000173_pilon 34635..34637 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4055.t1.CDS1Ggra4055.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000173_pilon 34635..35732 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4055.t1.exon1Ggra4055.t1.exon1Gracilaria gracilis GNS1m maleexontig00000173_pilon 34635..35732 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4055.t1.start1Ggra4055.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000173_pilon 35730..35732 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4055.t1Ggra4055.t1Gracilaria gracilis GNS1m malepolypeptidetig00000173_pilon 34635..35732 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4055.t1 ID=Ggra4055.t1|Name=Ggra4055.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=366bp
MFDSVRYDGPFADIRARHRAQLASEAISSFPTATNSYAPHLETNACETSN
GDLFDSVRYDDPFADTRARHRTQLASGATVSFSTATNFCAPHLETTICEG
TNEFRSSDPQVLLQTDTTEWGLYREPEFAATPMDFSSPFTHNQSSEPLIY
LPDDPHNEFEPSFGNRRRTKHECSAQKEKGINGRSSNGRSSNEDHVNTTQ
PKTPSILAESTRDSFTIQANIKQTPSHSSRKRSSQSFSISEKPIISVQAP
AHAYSASSDPCLGGNRNKEVHDEFKCALVHTDPGPGSSLNCNSGDSSDTR
DVREDSGLGKRQRDDETGGFDKHHEDELKSPLQKRRRSLQKEYRGGSKIF
VCNSETVGSRDGNLW*
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spliced messenger RNA

>Ggra4055.t1 ID=Ggra4055.t1|Name=Ggra4055.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1098bp|location=Sequence derived from alignment at tig00000173_pilon:34635..35732- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCGACTCTGTGCGCTATGATGGCCCTTTTGCTGATATACGTGCGCG
ACATCGAGCACAACTTGCATCCGAAGCGATTTCTTCATTCCCAACCGCCA
CCAATTCTTATGCTCCTCACCTCGAAACCAATGCTTGTGAAACTTCCAAC
GGAGATTTGTTCGACTCTGTGCGCTACGATGACCCTTTTGCTGATACACG
TGCACGACATCGAACACAACTTGCATCCGGAGCGACTGTTTCATTCTCAA
CCGCCACCAATTTTTGTGCGCCTCACCTCGAAACTACAATTTGTGAAGGA
ACAAACGAGTTTCGAAGCTCGGACCCGCAGGTCTTGTTGCAGACAGATAC
CACGGAATGGGGTTTGTACAGAGAACCGGAATTTGCTGCAACGCCTATGG
ACTTTAGTTCTCCATTCACTCATAACCAATCTTCTGAGCCTCTCATATAC
CTCCCTGACGATCCCCATAACGAGTTTGAACCTTCATTTGGGAATAGAAG
GAGGACCAAACACGAGTGTTCAGCTCAGAAAGAGAAGGGTATTAACGGCC
GATCTTCGAACGGCCGATCTTCGAACGAAGATCATGTCAATACGACTCAA
CCCAAGACGCCTTCTATCCTGGCGGAGTCGACCAGGGATTCATTTACCAT
CCAGGCGAACATAAAACAAACACCGAGTCATTCATCCCGGAAGCGCTCCA
GCCAATCTTTCTCCATATCTGAGAAACCCATTATTTCTGTTCAGGCTCCC
GCCCACGCTTACTCAGCATCATCGGATCCGTGTCTTGGCGGAAACCGTAA
CAAAGAAGTGCATGATGAGTTCAAGTGTGCTTTGGTTCATACTGATCCCG
GACCTGGCAGTTCTCTCAATTGTAACAGTGGGGACAGTAGTGATACTAGA
GATGTAAGAGAAGATTCTGGTCTTGGAAAGAGACAACGTGATGATGAAAC
AGGTGGATTCGATAAACATCATGAAGATGAGCTGAAGTCCCCTCTGCAGA
AGAGAAGAAGATCTTTGCAGAAAGAATACCGGGGTGGTAGTAAAATATTC
GTTTGCAACTCGGAGACGGTCGGAAGCCGAGACGGAAACCTTTGGTAA
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protein sequence of Ggra4055.t1

>Ggra4055.t1 ID=Ggra4055.t1|Name=Ggra4055.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=366bp
MFDSVRYDGPFADIRARHRAQLASEAISSFPTATNSYAPHLETNACETSN
GDLFDSVRYDDPFADTRARHRTQLASGATVSFSTATNFCAPHLETTICEG
TNEFRSSDPQVLLQTDTTEWGLYREPEFAATPMDFSSPFTHNQSSEPLIY
LPDDPHNEFEPSFGNRRRTKHECSAQKEKGINGRSSNGRSSNEDHVNTTQ
PKTPSILAESTRDSFTIQANIKQTPSHSSRKRSSQSFSISEKPIISVQAP
AHAYSASSDPCLGGNRNKEVHDEFKCALVHTDPGPGSSLNCNSGDSSDTR
DVREDSGLGKRQRDDETGGFDKHHEDELKSPLQKRRRSLQKEYRGGSKIF
VCNSETVGSRDGNLW*
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mRNA from alignment at tig00000173_pilon:34635..35732-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4055.t1 ID=Ggra4055.t1|Name=Ggra4055.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1098bp|location=Sequence derived from alignment at tig00000173_pilon:34635..35732- (Gracilaria gracilis GNS1m male)
ATGTTCGACTCTGTGCGCTATGATGGCCCTTTTGCTGATATACGTGCGCG
ACATCGAGCACAACTTGCATCCGAAGCGATTTCTTCATTCCCAACCGCCA
CCAATTCTTATGCTCCTCACCTCGAAACCAATGCTTGTGAAACTTCCAAC
GGAGATTTGTTCGACTCTGTGCGCTACGATGACCCTTTTGCTGATACACG
TGCACGACATCGAACACAACTTGCATCCGGAGCGACTGTTTCATTCTCAA
CCGCCACCAATTTTTGTGCGCCTCACCTCGAAACTACAATTTGTGAAGGA
ACAAACGAGTTTCGAAGCTCGGACCCGCAGGTCTTGTTGCAGACAGATAC
CACGGAATGGGGTTTGTACAGAGAACCGGAATTTGCTGCAACGCCTATGG
ACTTTAGTTCTCCATTCACTCATAACCAATCTTCTGAGCCTCTCATATAC
CTCCCTGACGATCCCCATAACGAGTTTGAACCTTCATTTGGGAATAGAAG
GAGGACCAAACACGAGTGTTCAGCTCAGAAAGAGAAGGGTATTAACGGCC
GATCTTCGAACGGCCGATCTTCGAACGAAGATCATGTCAATACGACTCAA
CCCAAGACGCCTTCTATCCTGGCGGAGTCGACCAGGGATTCATTTACCAT
CCAGGCGAACATAAAACAAACACCGAGTCATTCATCCCGGAAGCGCTCCA
GCCAATCTTTCTCCATATCTGAGAAACCCATTATTTCTGTTCAGGCTCCC
GCCCACGCTTACTCAGCATCATCGGATCCGTGTCTTGGCGGAAACCGTAA
CAAAGAAGTGCATGATGAGTTCAAGTGTGCTTTGGTTCATACTGATCCCG
GACCTGGCAGTTCTCTCAATTGTAACAGTGGGGACAGTAGTGATACTAGA
GATGTAAGAGAAGATTCTGGTCTTGGAAAGAGACAACGTGATGATGAAAC
AGGTGGATTCGATAAACATCATGAAGATGAGCTGAAGTCCCCTCTGCAGA
AGAGAAGAAGATCTTTGCAGAAAGAATACCGGGGTGGTAGTAAAATATTC
GTTTGCAACTCGGAGACGGTCGGAAGCCGAGACGGAAACCTTTGGTAA
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Coding sequence (CDS) from alignment at tig00000173_pilon:34635..35732-

>Ggra4055.t1 ID=Ggra4055.t1|Name=Ggra4055.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1098bp|location=Sequence derived from alignment at tig00000173_pilon:34635..35732- (Gracilaria gracilis GNS1m male)
ATGTTCGACTCTGTGCGCTATGATGGCCCTTTTGCTGATATACGTGCGCG
ACATCGAGCACAACTTGCATCCGAAGCGATTTCTTCATTCCCAACCGCCA
CCAATTCTTATGCTCCTCACCTCGAAACCAATGCTTGTGAAACTTCCAAC
GGAGATTTGTTCGACTCTGTGCGCTACGATGACCCTTTTGCTGATACACG
TGCACGACATCGAACACAACTTGCATCCGGAGCGACTGTTTCATTCTCAA
CCGCCACCAATTTTTGTGCGCCTCACCTCGAAACTACAATTTGTGAAGGA
ACAAACGAGTTTCGAAGCTCGGACCCGCAGGTCTTGTTGCAGACAGATAC
CACGGAATGGGGTTTGTACAGAGAACCGGAATTTGCTGCAACGCCTATGG
ACTTTAGTTCTCCATTCACTCATAACCAATCTTCTGAGCCTCTCATATAC
CTCCCTGACGATCCCCATAACGAGTTTGAACCTTCATTTGGGAATAGAAG
GAGGACCAAACACGAGTGTTCAGCTCAGAAAGAGAAGGGTATTAACGGCC
GATCTTCGAACGGCCGATCTTCGAACGAAGATCATGTCAATACGACTCAA
CCCAAGACGCCTTCTATCCTGGCGGAGTCGACCAGGGATTCATTTACCAT
CCAGGCGAACATAAAACAAACACCGAGTCATTCATCCCGGAAGCGCTCCA
GCCAATCTTTCTCCATATCTGAGAAACCCATTATTTCTGTTCAGGCTCCC
GCCCACGCTTACTCAGCATCATCGGATCCGTGTCTTGGCGGAAACCGTAA
CAAAGAAGTGCATGATGAGTTCAAGTGTGCTTTGGTTCATACTGATCCCG
GACCTGGCAGTTCTCTCAATTGTAACAGTGGGGACAGTAGTGATACTAGA
GATGTAAGAGAAGATTCTGGTCTTGGAAAGAGACAACGTGATGATGAAAC
AGGTGGATTCGATAAACATCATGAAGATGAGCTGAAGTCCCCTCTGCAGA
AGAGAAGAAGATCTTTGCAGAAAGAATACCGGGGTGGTAGTAAAATATTC
GTTTGCAACTCGGAGACGGTCGGAAGCCGAGACGGAAACCTTTGGTAA
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