Ggra4924.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4924.t1
Unique NameGgra4924.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:128255..129295 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4924Ggra4924Gracilaria gracilis GNS1m malegenetig00000157_pilon 128255..129295 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4924.t1.stop1Ggra4924.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000157_pilon 128255..128257 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4924.t1.CDS1Ggra4924.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000157_pilon 128255..129295 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4924.t1.exon1Ggra4924.t1.exon1Gracilaria gracilis GNS1m maleexontig00000157_pilon 128255..129295 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4924.t1.start1Ggra4924.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000157_pilon 129293..129295 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4924.t1Ggra4924.t1Gracilaria gracilis GNS1m malepolypeptidetig00000157_pilon 128255..129295 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4924.t1 ID=Ggra4924.t1|Name=Ggra4924.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=347bp
MTRFTGILFIVLVYKCALGAPIARMMGCGKGKPLSPDKQSFCCEHFNLDC
PSAGAVDVDSALTANLEREDDDGKPEFKVHVRTLGEECKPPLYVCGVGLE
CKEGLCFRIKTKAHLKRLLRRGREVEKEEREQVRDGEDVDEEDPLPARKG
LILEGQSLKLSDTGSQTSPGTMTEGSVAGSKANDAGTMDLEEDEVAANIW
ELLSKTMGIKLSRKQIHNVREVIAGTIDERAEREEQVDETEGNSSPAGSD
RDEADMERMSARDQESSGSSHVNGRRANRSRNGNSLGFSDPSLKSESQLK
EIGEDCGPHAGAQSQRAGMQCPAKLPKRNNKGSEELVDVESAMIRD*
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spliced messenger RNA

>Ggra4924.t1 ID=Ggra4924.t1|Name=Ggra4924.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1041bp|location=Sequence derived from alignment at tig00000157_pilon:128255..129295- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTCGCTTCACCGGCATCTTATTTATTGTGTTGGTCTATAAATGTGC
GTTAGGGGCGCCCATAGCCAGGATGATGGGTTGCGGGAAGGGAAAACCAC
TGTCACCGGACAAACAGAGTTTTTGTTGTGAGCATTTCAATCTTGATTGC
CCGAGTGCAGGAGCCGTTGATGTTGATTCTGCGCTTACGGCGAATTTGGA
ACGTGAAGACGATGATGGTAAACCAGAATTCAAAGTCCATGTGAGAACAC
TTGGCGAAGAGTGCAAACCGCCACTGTACGTTTGTGGGGTTGGTCTGGAA
TGCAAAGAAGGATTGTGCTTTCGAATCAAGACTAAGGCTCATCTCAAAAG
ACTTTTGAGAAGAGGACGAGAGGTCGAAAAGGAAGAAAGAGAACAGGTTC
GTGACGGTGAGGATGTAGATGAAGAGGATCCGTTACCTGCCCGTAAAGGT
CTCATATTAGAAGGCCAGTCTCTTAAACTTTCTGACACAGGGAGTCAAAC
GTCCCCTGGAACCATGACAGAAGGAAGTGTCGCAGGAAGCAAAGCAAATG
ACGCTGGAACTATGGATCTGGAAGAGGATGAAGTAGCTGCGAATATTTGG
GAGCTTCTGTCGAAGACAATGGGCATCAAGTTGAGTCGAAAACAGATTCA
TAATGTGCGGGAAGTTATTGCGGGAACTATTGATGAAAGAGCAGAGCGTG
AAGAACAAGTAGACGAGACAGAGGGGAATAGTTCACCTGCAGGGAGTGAT
AGAGATGAGGCGGACATGGAGAGAATGAGTGCCCGTGACCAAGAAAGCTC
AGGTTCCTCTCATGTTAACGGCAGGAGGGCAAACAGGAGCAGGAATGGAA
ACTCCCTAGGATTCTCCGACCCTTCACTTAAATCAGAGTCTCAATTGAAG
GAGATAGGCGAAGATTGTGGGCCTCACGCAGGGGCGCAGAGTCAGCGAGC
AGGGATGCAATGTCCTGCAAAGCTTCCGAAGAGAAATAACAAAGGCTCAG
AGGAATTAGTCGATGTGGAAAGTGCCATGATAAGGGATTGA
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protein sequence of Ggra4924.t1

>Ggra4924.t1 ID=Ggra4924.t1|Name=Ggra4924.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MTRFTGILFIVLVYKCALGAPIARMMGCGKGKPLSPDKQSFCCEHFNLDC
PSAGAVDVDSALTANLEREDDDGKPEFKVHVRTLGEECKPPLYVCGVGLE
CKEGLCFRIKTKAHLKRLLRRGREVEKEEREQVRDGEDVDEEDPLPARKG
LILEGQSLKLSDTGSQTSPGTMTEGSVAGSKANDAGTMDLEEDEVAANIW
ELLSKTMGIKLSRKQIHNVREVIAGTIDERAEREEQVDETEGNSSPAGSD
RDEADMERMSARDQESSGSSHVNGRRANRSRNGNSLGFSDPSLKSESQLK
EIGEDCGPHAGAQSQRAGMQCPAKLPKRNNKGSEELVDVESAMIRD*
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mRNA from alignment at tig00000157_pilon:128255..129295-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4924.t1 ID=Ggra4924.t1|Name=Ggra4924.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1041bp|location=Sequence derived from alignment at tig00000157_pilon:128255..129295- (Gracilaria gracilis GNS1m male)
ATGACTCGCTTCACCGGCATCTTATTTATTGTGTTGGTCTATAAATGTGC
GTTAGGGGCGCCCATAGCCAGGATGATGGGTTGCGGGAAGGGAAAACCAC
TGTCACCGGACAAACAGAGTTTTTGTTGTGAGCATTTCAATCTTGATTGC
CCGAGTGCAGGAGCCGTTGATGTTGATTCTGCGCTTACGGCGAATTTGGA
ACGTGAAGACGATGATGGTAAACCAGAATTCAAAGTCCATGTGAGAACAC
TTGGCGAAGAGTGCAAACCGCCACTGTACGTTTGTGGGGTTGGTCTGGAA
TGCAAAGAAGGATTGTGCTTTCGAATCAAGACTAAGGCTCATCTCAAAAG
ACTTTTGAGAAGAGGACGAGAGGTCGAAAAGGAAGAAAGAGAACAGGTTC
GTGACGGTGAGGATGTAGATGAAGAGGATCCGTTACCTGCCCGTAAAGGT
CTCATATTAGAAGGCCAGTCTCTTAAACTTTCTGACACAGGGAGTCAAAC
GTCCCCTGGAACCATGACAGAAGGAAGTGTCGCAGGAAGCAAAGCAAATG
ACGCTGGAACTATGGATCTGGAAGAGGATGAAGTAGCTGCGAATATTTGG
GAGCTTCTGTCGAAGACAATGGGCATCAAGTTGAGTCGAAAACAGATTCA
TAATGTGCGGGAAGTTATTGCGGGAACTATTGATGAAAGAGCAGAGCGTG
AAGAACAAGTAGACGAGACAGAGGGGAATAGTTCACCTGCAGGGAGTGAT
AGAGATGAGGCGGACATGGAGAGAATGAGTGCCCGTGACCAAGAAAGCTC
AGGTTCCTCTCATGTTAACGGCAGGAGGGCAAACAGGAGCAGGAATGGAA
ACTCCCTAGGATTCTCCGACCCTTCACTTAAATCAGAGTCTCAATTGAAG
GAGATAGGCGAAGATTGTGGGCCTCACGCAGGGGCGCAGAGTCAGCGAGC
AGGGATGCAATGTCCTGCAAAGCTTCCGAAGAGAAATAACAAAGGCTCAG
AGGAATTAGTCGATGTGGAAAGTGCCATGATAAGGGATTGA
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Coding sequence (CDS) from alignment at tig00000157_pilon:128255..129295-

>Ggra4924.t1 ID=Ggra4924.t1|Name=Ggra4924.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1041bp|location=Sequence derived from alignment at tig00000157_pilon:128255..129295- (Gracilaria gracilis GNS1m male)
ATGACTCGCTTCACCGGCATCTTATTTATTGTGTTGGTCTATAAATGTGC
GTTAGGGGCGCCCATAGCCAGGATGATGGGTTGCGGGAAGGGAAAACCAC
TGTCACCGGACAAACAGAGTTTTTGTTGTGAGCATTTCAATCTTGATTGC
CCGAGTGCAGGAGCCGTTGATGTTGATTCTGCGCTTACGGCGAATTTGGA
ACGTGAAGACGATGATGGTAAACCAGAATTCAAAGTCCATGTGAGAACAC
TTGGCGAAGAGTGCAAACCGCCACTGTACGTTTGTGGGGTTGGTCTGGAA
TGCAAAGAAGGATTGTGCTTTCGAATCAAGACTAAGGCTCATCTCAAAAG
ACTTTTGAGAAGAGGACGAGAGGTCGAAAAGGAAGAAAGAGAACAGGTTC
GTGACGGTGAGGATGTAGATGAAGAGGATCCGTTACCTGCCCGTAAAGGT
CTCATATTAGAAGGCCAGTCTCTTAAACTTTCTGACACAGGGAGTCAAAC
GTCCCCTGGAACCATGACAGAAGGAAGTGTCGCAGGAAGCAAAGCAAATG
ACGCTGGAACTATGGATCTGGAAGAGGATGAAGTAGCTGCGAATATTTGG
GAGCTTCTGTCGAAGACAATGGGCATCAAGTTGAGTCGAAAACAGATTCA
TAATGTGCGGGAAGTTATTGCGGGAACTATTGATGAAAGAGCAGAGCGTG
AAGAACAAGTAGACGAGACAGAGGGGAATAGTTCACCTGCAGGGAGTGAT
AGAGATGAGGCGGACATGGAGAGAATGAGTGCCCGTGACCAAGAAAGCTC
AGGTTCCTCTCATGTTAACGGCAGGAGGGCAAACAGGAGCAGGAATGGAA
ACTCCCTAGGATTCTCCGACCCTTCACTTAAATCAGAGTCTCAATTGAAG
GAGATAGGCGAAGATTGTGGGCCTCACGCAGGGGCGCAGAGTCAGCGAGC
AGGGATGCAATGTCCTGCAAAGCTTCCGAAGAGAAATAACAAAGGCTCAG
AGGAATTAGTCGATGTGGAAAGTGCCATGATAAGGGATTGA
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