Ggra4919.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4919.t1
Unique NameGgra4919.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length231
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:94960..95652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4919Ggra4919Gracilaria gracilis GNS1m malegenetig00000157_pilon 94960..95652 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4919.t1.stop1Ggra4919.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000157_pilon 94960..94962 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4919.t1.CDS1Ggra4919.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000157_pilon 94960..95652 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4919.t1.exon1Ggra4919.t1.exon1Gracilaria gracilis GNS1m maleexontig00000157_pilon 94960..95652 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4919.t1.start1Ggra4919.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000157_pilon 95650..95652 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4919.t1Ggra4919.t1Gracilaria gracilis GNS1m malepolypeptidetig00000157_pilon 94960..95652 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4919.t1 ID=Ggra4919.t1|Name=Ggra4919.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=231bp
MFLNPWPLAEISMAQTPGIKDERTIINFILQGLRNDERFSSRATAMIVDT
PAKTIVETQQRREQYESILSQPTVATTHASISFTPKITYRGGKSRFNRGR
GRKRYGGSSTRDLKNAKDGINKKLDALKDSKSHRGDRDRGAAKAASSHMD
QVPEELLNPLQALDTPQETASQKECTYALDSSAHPSIFSHATPDEINLTF
PHHHFNHHHFNRLYEMLTDKEEGNPNAVHE*
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spliced messenger RNA

>Ggra4919.t1 ID=Ggra4919.t1|Name=Ggra4919.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=693bp|location=Sequence derived from alignment at tig00000157_pilon:94960..95652- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTCTCAACCCATGGCCACTCGCCGAAATCAGTATGGCTCAAACCCC
AGGCATAAAAGATGAACGCACCATCATCAATTTCATACTTCAAGGTCTAC
GCAACGATGAGCGCTTCAGTTCTAGGGCGACAGCAATGATCGTGGATACG
CCAGCGAAAACAATTGTCGAAACACAACAACGTCGGGAGCAGTATGAATC
AATTCTATCACAACCCACAGTAGCCACTACCCACGCTTCGATTTCCTTCA
CACCCAAAATCACATATAGGGGAGGGAAATCACGCTTTAACAGGGGCAGA
GGCCGAAAACGATACGGTGGGTCGAGCACAAGAGACCTTAAGAATGCCAA
AGATGGCATAAATAAGAAGCTGGATGCTCTCAAAGACTCGAAGTCCCATC
GTGGTGATCGAGATAGAGGCGCTGCTAAAGCCGCTTCTTCGCACATGGAT
CAAGTGCCGGAGGAACTACTGAATCCCTTACAGGCACTCGACACGCCTCA
GGAGACTGCGTCTCAGAAAGAATGTACGTATGCGCTCGATTCCAGCGCAC
ACCCGTCCATCTTCTCACACGCCACCCCAGATGAGATTAACCTAACCTTT
CCTCATCACCACTTCAATCATCACCACTTCAACCGCCTGTACGAAATGCT
TACAGACAAGGAAGAAGGGAACCCTAACGCTGTTCACGAGTAA
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protein sequence of Ggra4919.t1

>Ggra4919.t1 ID=Ggra4919.t1|Name=Ggra4919.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=231bp
MFLNPWPLAEISMAQTPGIKDERTIINFILQGLRNDERFSSRATAMIVDT
PAKTIVETQQRREQYESILSQPTVATTHASISFTPKITYRGGKSRFNRGR
GRKRYGGSSTRDLKNAKDGINKKLDALKDSKSHRGDRDRGAAKAASSHMD
QVPEELLNPLQALDTPQETASQKECTYALDSSAHPSIFSHATPDEINLTF
PHHHFNHHHFNRLYEMLTDKEEGNPNAVHE*
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mRNA from alignment at tig00000157_pilon:94960..95652-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4919.t1 ID=Ggra4919.t1|Name=Ggra4919.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=693bp|location=Sequence derived from alignment at tig00000157_pilon:94960..95652- (Gracilaria gracilis GNS1m male)
ATGTTTCTCAACCCATGGCCACTCGCCGAAATCAGTATGGCTCAAACCCC
AGGCATAAAAGATGAACGCACCATCATCAATTTCATACTTCAAGGTCTAC
GCAACGATGAGCGCTTCAGTTCTAGGGCGACAGCAATGATCGTGGATACG
CCAGCGAAAACAATTGTCGAAACACAACAACGTCGGGAGCAGTATGAATC
AATTCTATCACAACCCACAGTAGCCACTACCCACGCTTCGATTTCCTTCA
CACCCAAAATCACATATAGGGGAGGGAAATCACGCTTTAACAGGGGCAGA
GGCCGAAAACGATACGGTGGGTCGAGCACAAGAGACCTTAAGAATGCCAA
AGATGGCATAAATAAGAAGCTGGATGCTCTCAAAGACTCGAAGTCCCATC
GTGGTGATCGAGATAGAGGCGCTGCTAAAGCCGCTTCTTCGCACATGGAT
CAAGTGCCGGAGGAACTACTGAATCCCTTACAGGCACTCGACACGCCTCA
GGAGACTGCGTCTCAGAAAGAATGTACGTATGCGCTCGATTCCAGCGCAC
ACCCGTCCATCTTCTCACACGCCACCCCAGATGAGATTAACCTAACCTTT
CCTCATCACCACTTCAATCATCACCACTTCAACCGCCTGTACGAAATGCT
TACAGACAAGGAAGAAGGGAACCCTAACGCTGTTCACGAGTAA
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Coding sequence (CDS) from alignment at tig00000157_pilon:94960..95652-

>Ggra4919.t1 ID=Ggra4919.t1|Name=Ggra4919.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=693bp|location=Sequence derived from alignment at tig00000157_pilon:94960..95652- (Gracilaria gracilis GNS1m male)
ATGTTTCTCAACCCATGGCCACTCGCCGAAATCAGTATGGCTCAAACCCC
AGGCATAAAAGATGAACGCACCATCATCAATTTCATACTTCAAGGTCTAC
GCAACGATGAGCGCTTCAGTTCTAGGGCGACAGCAATGATCGTGGATACG
CCAGCGAAAACAATTGTCGAAACACAACAACGTCGGGAGCAGTATGAATC
AATTCTATCACAACCCACAGTAGCCACTACCCACGCTTCGATTTCCTTCA
CACCCAAAATCACATATAGGGGAGGGAAATCACGCTTTAACAGGGGCAGA
GGCCGAAAACGATACGGTGGGTCGAGCACAAGAGACCTTAAGAATGCCAA
AGATGGCATAAATAAGAAGCTGGATGCTCTCAAAGACTCGAAGTCCCATC
GTGGTGATCGAGATAGAGGCGCTGCTAAAGCCGCTTCTTCGCACATGGAT
CAAGTGCCGGAGGAACTACTGAATCCCTTACAGGCACTCGACACGCCTCA
GGAGACTGCGTCTCAGAAAGAATGTACGTATGCGCTCGATTCCAGCGCAC
ACCCGTCCATCTTCTCACACGCCACCCCAGATGAGATTAACCTAACCTTT
CCTCATCACCACTTCAATCATCACCACTTCAACCGCCTGTACGAAATGCT
TACAGACAAGGAAGAAGGGAACCCTAACGCTGTTCACGAGTAA
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