Ggra4674.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4674.t1
Unique NameGgra4674.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length368
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000124_piloncontigtig00000124_pilon:63658..64761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4674Ggra4674Gracilaria gracilis GNS1m malegenetig00000124_pilon 63658..64761 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4674.t1.start1Ggra4674.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000124_pilon 63658..63660 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4674.t1.CDS1Ggra4674.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000124_pilon 63658..64761 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4674.t1.exon1Ggra4674.t1.exon1Gracilaria gracilis GNS1m maleexontig00000124_pilon 63658..64761 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4674.t1.stop1Ggra4674.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000124_pilon 64759..64761 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4674.t1Ggra4674.t1Gracilaria gracilis GNS1m malepolypeptidetig00000124_pilon 63658..64761 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4674.t1 ID=Ggra4674.t1|Name=Ggra4674.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=368bp
MDRNRIYDEDVKIYEEERTKCEDVAFVEKQTPTGKSYKRALGASATWYDM
ALGFSVAMNYGLGAAVAGTIATPILGVLGTIAVVTGVVTTLTSTAANVVR
NAGLGWAPYTFNRNYVEKTFKSSNTRNIRQAAAYVAYTKAILQHKATDEN
QGSDFFKMKISMMDLSIHGDDEKAKRMAFYSQLGKAISEGDANPWLKASK
GIVSSQISQVVLRGLSRIMNANNLTESVDCLLDDVNWKSLGKEKSPMTGK
YIDPEENIPYVALSYKYEGDTFKLGRSQAQQAVERAALIAESLTGKKEFR
IWVDQLVHGGGQEWVAIGLLPYLLMPVVQTDKAISYTAPPSREESTWISL
ERIDALLRYWLMRGFVN*
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spliced messenger RNA

>Ggra4674.t1 ID=Ggra4674.t1|Name=Ggra4674.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1104bp|location=Sequence derived from alignment at tig00000124_pilon:63658..64761+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATAGAAACCGTATCTATGATGAAGACGTCAAAATATACGAGGAGGA
AAGGACTAAATGTGAAGACGTGGCTTTTGTTGAGAAACAGACACCAACAG
GCAAGTCCTACAAACGAGCACTTGGAGCTTCCGCCACATGGTACGACATG
GCTCTTGGATTCTCAGTGGCTATGAACTATGGTCTAGGCGCTGCAGTCGC
TGGGACTATAGCAACACCTATACTAGGCGTGTTGGGCACGATTGCTGTTG
TGACCGGTGTTGTAACAACCTTGACGAGCACAGCCGCAAACGTAGTTCGA
AACGCCGGACTTGGATGGGCCCCTTACACATTCAACCGGAATTACGTGGA
GAAAACTTTCAAGTCAAGCAATACTCGTAATATTCGTCAAGCTGCGGCTT
ACGTAGCTTATACTAAGGCCATATTACAACACAAAGCAACTGATGAGAAT
CAGGGGTCTGATTTCTTCAAGATGAAAATTAGCATGATGGATCTATCTAT
CCATGGCGATGACGAGAAGGCGAAACGAATGGCTTTCTACAGTCAGTTAG
GGAAGGCAATTTCCGAGGGAGACGCAAATCCATGGTTGAAAGCTTCCAAA
GGGATAGTTAGCTCGCAGATATCACAAGTTGTTCTCAGAGGTTTGTCGCG
CATTATGAACGCAAACAATCTGACAGAGAGTGTGGACTGTTTACTTGATG
ATGTGAATTGGAAGTCTCTTGGCAAAGAGAAATCGCCCATGACTGGGAAG
TACATTGACCCGGAAGAAAACATCCCGTACGTGGCACTTTCTTACAAATA
TGAAGGAGACACCTTTAAGTTGGGGAGAAGTCAGGCGCAGCAGGCAGTCG
AAAGAGCCGCACTCATAGCGGAGTCCCTGACAGGAAAGAAAGAATTCAGA
ATATGGGTCGACCAACTGGTACACGGTGGCGGGCAAGAATGGGTGGCAAT
AGGTCTATTACCATACTTGTTGATGCCAGTTGTGCAAACTGATAAAGCAA
TCAGCTATACGGCGCCTCCCAGCCGAGAGGAAAGCACTTGGATCTCGCTG
GAGCGCATCGATGCTCTATTACGATACTGGCTGATGCGAGGGTTTGTGAA
CTGA
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protein sequence of Ggra4674.t1

>Ggra4674.t1 ID=Ggra4674.t1|Name=Ggra4674.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=368bp
MDRNRIYDEDVKIYEEERTKCEDVAFVEKQTPTGKSYKRALGASATWYDM
ALGFSVAMNYGLGAAVAGTIATPILGVLGTIAVVTGVVTTLTSTAANVVR
NAGLGWAPYTFNRNYVEKTFKSSNTRNIRQAAAYVAYTKAILQHKATDEN
QGSDFFKMKISMMDLSIHGDDEKAKRMAFYSQLGKAISEGDANPWLKASK
GIVSSQISQVVLRGLSRIMNANNLTESVDCLLDDVNWKSLGKEKSPMTGK
YIDPEENIPYVALSYKYEGDTFKLGRSQAQQAVERAALIAESLTGKKEFR
IWVDQLVHGGGQEWVAIGLLPYLLMPVVQTDKAISYTAPPSREESTWISL
ERIDALLRYWLMRGFVN*
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mRNA from alignment at tig00000124_pilon:63658..64761+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4674.t1 ID=Ggra4674.t1|Name=Ggra4674.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1104bp|location=Sequence derived from alignment at tig00000124_pilon:63658..64761+ (Gracilaria gracilis GNS1m male)
ATGGATAGAAACCGTATCTATGATGAAGACGTCAAAATATACGAGGAGGA
AAGGACTAAATGTGAAGACGTGGCTTTTGTTGAGAAACAGACACCAACAG
GCAAGTCCTACAAACGAGCACTTGGAGCTTCCGCCACATGGTACGACATG
GCTCTTGGATTCTCAGTGGCTATGAACTATGGTCTAGGCGCTGCAGTCGC
TGGGACTATAGCAACACCTATACTAGGCGTGTTGGGCACGATTGCTGTTG
TGACCGGTGTTGTAACAACCTTGACGAGCACAGCCGCAAACGTAGTTCGA
AACGCCGGACTTGGATGGGCCCCTTACACATTCAACCGGAATTACGTGGA
GAAAACTTTCAAGTCAAGCAATACTCGTAATATTCGTCAAGCTGCGGCTT
ACGTAGCTTATACTAAGGCCATATTACAACACAAAGCAACTGATGAGAAT
CAGGGGTCTGATTTCTTCAAGATGAAAATTAGCATGATGGATCTATCTAT
CCATGGCGATGACGAGAAGGCGAAACGAATGGCTTTCTACAGTCAGTTAG
GGAAGGCAATTTCCGAGGGAGACGCAAATCCATGGTTGAAAGCTTCCAAA
GGGATAGTTAGCTCGCAGATATCACAAGTTGTTCTCAGAGGTTTGTCGCG
CATTATGAACGCAAACAATCTGACAGAGAGTGTGGACTGTTTACTTGATG
ATGTGAATTGGAAGTCTCTTGGCAAAGAGAAATCGCCCATGACTGGGAAG
TACATTGACCCGGAAGAAAACATCCCGTACGTGGCACTTTCTTACAAATA
TGAAGGAGACACCTTTAAGTTGGGGAGAAGTCAGGCGCAGCAGGCAGTCG
AAAGAGCCGCACTCATAGCGGAGTCCCTGACAGGAAAGAAAGAATTCAGA
ATATGGGTCGACCAACTGGTACACGGTGGCGGGCAAGAATGGGTGGCAAT
AGGTCTATTACCATACTTGTTGATGCCAGTTGTGCAAACTGATAAAGCAA
TCAGCTATACGGCGCCTCCCAGCCGAGAGGAAAGCACTTGGATCTCGCTG
GAGCGCATCGATGCTCTATTACGATACTGGCTGATGCGAGGGTTTGTGAA
CTGA
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Coding sequence (CDS) from alignment at tig00000124_pilon:63658..64761+

>Ggra4674.t1 ID=Ggra4674.t1|Name=Ggra4674.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1104bp|location=Sequence derived from alignment at tig00000124_pilon:63658..64761+ (Gracilaria gracilis GNS1m male)
ATGGATAGAAACCGTATCTATGATGAAGACGTCAAAATATACGAGGAGGA
AAGGACTAAATGTGAAGACGTGGCTTTTGTTGAGAAACAGACACCAACAG
GCAAGTCCTACAAACGAGCACTTGGAGCTTCCGCCACATGGTACGACATG
GCTCTTGGATTCTCAGTGGCTATGAACTATGGTCTAGGCGCTGCAGTCGC
TGGGACTATAGCAACACCTATACTAGGCGTGTTGGGCACGATTGCTGTTG
TGACCGGTGTTGTAACAACCTTGACGAGCACAGCCGCAAACGTAGTTCGA
AACGCCGGACTTGGATGGGCCCCTTACACATTCAACCGGAATTACGTGGA
GAAAACTTTCAAGTCAAGCAATACTCGTAATATTCGTCAAGCTGCGGCTT
ACGTAGCTTATACTAAGGCCATATTACAACACAAAGCAACTGATGAGAAT
CAGGGGTCTGATTTCTTCAAGATGAAAATTAGCATGATGGATCTATCTAT
CCATGGCGATGACGAGAAGGCGAAACGAATGGCTTTCTACAGTCAGTTAG
GGAAGGCAATTTCCGAGGGAGACGCAAATCCATGGTTGAAAGCTTCCAAA
GGGATAGTTAGCTCGCAGATATCACAAGTTGTTCTCAGAGGTTTGTCGCG
CATTATGAACGCAAACAATCTGACAGAGAGTGTGGACTGTTTACTTGATG
ATGTGAATTGGAAGTCTCTTGGCAAAGAGAAATCGCCCATGACTGGGAAG
TACATTGACCCGGAAGAAAACATCCCGTACGTGGCACTTTCTTACAAATA
TGAAGGAGACACCTTTAAGTTGGGGAGAAGTCAGGCGCAGCAGGCAGTCG
AAAGAGCCGCACTCATAGCGGAGTCCCTGACAGGAAAGAAAGAATTCAGA
ATATGGGTCGACCAACTGGTACACGGTGGCGGGCAAGAATGGGTGGCAAT
AGGTCTATTACCATACTTGTTGATGCCAGTTGTGCAAACTGATAAAGCAA
TCAGCTATACGGCGCCTCCCAGCCGAGAGGAAAGCACTTGGATCTCGCTG
GAGCGCATCGATGCTCTATTACGATACTGGCTGATGCGAGGGTTTGTGAA
CTGA
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