Ggra8137.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8137.t1
Unique NameGgra8137.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length673
Homology
The following BLAST results are available for this feature:
BLAST of Ggra8137.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 462..482
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 294..443
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 294..443
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..672
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 312..448
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 332..368
e-value: 1.3
score: 18.1
coord: 370..406
e-value: 0.0022
score: 27.2
coord: 292..331
e-value: 16.0
score: 12.0
coord: 412..448
e-value: 1.4
score: 18.0
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 333..368
e-value: 0.0084
score: 16.8
coord: 296..331
e-value: 1.4
score: 9.8
coord: 371..406
e-value: 1.8E-4
score: 22.1
coord: 412..443
e-value: 0.0059
score: 17.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 271..488
e-value: 1.2E-24
score: 89.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000118_piloncontigtig00000118_pilon:310571..314369 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8137.t1Ggra8137.t1Gracilaria gracilis GNS1m malemRNAtig00000118_pilon 310571..314369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8137.t1 ID=Ggra8137.t1|Name=Ggra8137.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=673bp
MILLLLSFPGLRLDLVESEEDFRVEHNGHWCAIDMSYFGGEKESYKWRRA
RTVQTRNKTGNKSSRICASLNIQVVCGPQEVSIQTTLDSSNKCTLKLLER
EGSDFQWKYWRDSFQGRLEGFQEWQRDLGVPPVDVFLGKLDKDGTAFVEI
DTALGSKVKILAEWPPFRPQFCRLELEGSNFLKQPTTVGQKDVEDRITNF
GISNLPLQVVQPVSYDDVNEQVLRHSSLLVRNVVVKVDRGWTNESDESED
LCGTNEELDICSTVFRRFKPSRLCLESYNSNGSNPRRVETWLAAVCDLGN
LLMECSEERDGVPCDPNRAMSLYKKGIKKGSTRAMTKLGIVMAGDIEGIP
ADPRKAVDLFNRAIRDGNEIEAMNRLAMLLESGEEAIPADPPQAAHLYAR
AIQEGSKQGTIAMAMYRLSTILMLGEESVEVDVRQALRLLKRAMGVDMNV
DYVLYLAAAVIIRRCEEEVETVKEMIRSALRSRRPAENLGVVQFLWEAFK
YGRRACEQDGVLAGEFERYAEVFGIDLVAEEEDKDGLRRPHQAGAFEARA
RSKDQDIGGRSREAQCLFTADEVVALMMHSVTKSYPRSKPQNSPKLVSTP
TPKKTVAIQNAAIMDAHKLRSRSVKDRDSERGECDVVSGMVFKACVETRE
WGVSTLREHEEVAREVLGAVAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf