Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10122.t1.start1 | Ggra10122.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000113_pilon 241685..241687 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10122.t1.stop1 | Ggra10122.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000113_pilon 243950..243952 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10122.t1 ID=Ggra10122.t1|Name=Ggra10122.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=756bp
MAGTDFICVYCQETLQEGEAVRFIEECQHFCHVTCQPPARCPFDDQHLDL
HAASNAPSLPFSLECGSRFERLREKRSHAASCRNIAWILLHERNKSEKAL
LWLNKAIKKTPPSANALLDLADWYERGFAVICDTSHARDLRKKAQILLDD
LNERNERFISNGEEGQVQTNQAQEDPAHDYQPDDGHPASSLQQQSKPYGQ
QPSSQVPHNPEYSLPGHTAVDDHLSRKDPQLNPQVATETNLSDVSSAVSS
EGREMNAQGLRTDTLVHKASHADIAYPGEVNNGEHMNQSLVTPEHGPRGC
EASNDSRSLGGAQRNVEESAFYPQKDDHLSPRDDVAACTSVRKQQHMPHV
GLGSRPSLNPLHNPKSTNRKDGEWESHFTADQGSGSAADPIQDASSSQWT
PTWPMNEYRELSESFSSEQNDEHRFARPLTEEKHGEVPEPLNTTARTEMQ
GSWTSVPGRASQSGGTVGSGYESPLIPDRNNQANHIRPDISSSIDGTHVS
PGAPPVAEPITGEPPGLHIFMARLKQARMSGEPLSSGSEYVRRDCAEDDT
PAFSRREGEYARDSNEYASDRHYYSTGTPSFEKESYPPPPGSVQSDGARA
SASTASVQFVFPAVGKFRDMFGRIPEVGQETVSNYVEAAKRLRKLKEKIM
ELQERRESYWHRQAANVVVAVPAAVFTSGFSTIASGSALIHQRNRLEQLK
KCVRDIIKQINEIRSSFAEFEDTPEWKAAEDSVTLGRKVFGRRSGVKRSE
LEGGL* back to topspliced messenger RNA >Ggra10122.t1 ID=Ggra10122.t1|Name=Ggra10122.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2268bp|location=Sequence derived from alignment at tig00000113_pilon:241685..243952+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCGGGACCGACTTCATCTGCGTTTACTGCCAGGAAACACTTCAAGA
GGGGGAGGCCGTCCGCTTCATCGAGGAGTGCCAGCACTTCTGTCATGTCA
CATGCCAGCCCCCAGCACGCTGTCCGTTCGACGACCAACATCTCGACCTT
CACGCAGCCTCCAACGCACCCTCGTTGCCGTTCTCATTGGAATGCGGCTC
ACGTTTCGAGCGCCTTCGCGAGAAGCGCTCTCACGCCGCCTCGTGCCGCA
ACATTGCCTGGATTCTGTTGCATGAGCGGAACAAATCAGAAAAGGCCCTC
TTGTGGCTCAACAAAGCCATCAAGAAGACCCCACCCTCCGCCAACGCGCT
TCTAGACCTCGCCGACTGGTACGAAAGAGGTTTTGCCGTAATCTGCGATA
CTTCTCACGCACGTGATTTGCGAAAGAAGGCACAGATACTGCTTGACGAT
CTGAACGAGCGAAACGAACGCTTTATCAGTAACGGCGAAGAAGGGCAAGT
CCAAACCAACCAAGCCCAGGAAGACCCAGCTCACGATTACCAACCCGATG
ATGGCCACCCCGCTTCTTCTCTCCAACAACAATCAAAGCCATATGGCCAG
CAACCCAGTTCCCAAGTCCCGCACAATCCTGAATACTCTCTGCCTGGGCA
TACTGCGGTAGACGATCACCTTTCGCGGAAAGATCCTCAACTCAACCCCC
AAGTAGCGACAGAAACTAATTTGAGCGATGTCTCTTCTGCAGTTTCTAGC
GAAGGAAGGGAAATGAATGCTCAGGGCTTGCGGACAGATACTCTCGTTCA
TAAAGCATCCCATGCCGACATTGCGTATCCGGGTGAAGTCAATAATGGTG
AGCATATGAATCAAAGTCTGGTCACTCCCGAACATGGACCCAGAGGCTGT
GAGGCCAGTAATGATTCCCGCTCTTTGGGGGGCGCCCAGCGTAATGTCGA
AGAAAGTGCGTTTTATCCCCAAAAAGATGATCATCTTAGTCCAAGAGACG
ACGTTGCGGCTTGCACATCAGTTAGAAAGCAACAGCACATGCCCCATGTG
GGCTTGGGTAGTCGCCCTTCTCTAAATCCTCTTCACAATCCTAAATCTAC
AAACCGAAAGGATGGTGAATGGGAATCACATTTCACGGCTGATCAAGGGA
GTGGCTCCGCAGCAGATCCGATTCAGGATGCTTCATCTAGCCAATGGACT
CCAACTTGGCCTATGAACGAATACAGAGAACTCTCAGAGTCCTTCAGTTC
CGAGCAAAACGATGAACACCGTTTTGCGAGACCGTTGACGGAAGAGAAAC
ATGGGGAAGTTCCTGAGCCATTGAATACTACCGCAAGAACCGAAATGCAG
GGCTCCTGGACCTCTGTCCCGGGACGAGCATCACAGTCAGGGGGCACTGT
AGGATCTGGTTATGAGAGTCCTTTGATTCCGGACAGGAATAACCAAGCCA
ATCATATCCGGCCTGATATTTCTTCATCAATCGACGGAACACATGTTTCG
CCTGGGGCTCCTCCGGTAGCGGAGCCAATAACTGGAGAACCACCAGGACT
TCATATTTTTATGGCCCGATTGAAACAGGCAAGAATGAGTGGAGAACCGT
TATCATCAGGCTCTGAATATGTTCGCAGAGATTGTGCCGAAGACGACACT
CCGGCTTTCTCACGGAGGGAAGGCGAATATGCACGGGATTCAAATGAATA
CGCATCTGATAGGCACTATTACTCGACTGGAACTCCAAGTTTCGAGAAGG
AATCATACCCGCCCCCGCCTGGGAGTGTGCAAAGCGATGGAGCACGTGCA
AGTGCGTCCACGGCTTCTGTTCAGTTCGTATTTCCTGCGGTAGGAAAGTT
CAGGGACATGTTTGGGCGAATTCCAGAGGTGGGTCAAGAGACGGTGAGCA
ACTACGTGGAAGCTGCAAAGCGACTGCGAAAACTGAAGGAAAAGATCATG
GAACTTCAGGAGAGGCGTGAATCATACTGGCATCGACAGGCAGCAAATGT
TGTTGTAGCGGTACCTGCTGCTGTGTTTACCTCCGGATTCTCAACAATAG
CGAGCGGATCGGCACTCATCCATCAGAGAAACCGACTGGAGCAACTGAAG
AAATGCGTTCGAGACATCATCAAACAGATCAATGAGATCCGGTCATCGTT
CGCTGAATTCGAAGACACACCTGAATGGAAGGCTGCGGAAGACTCTGTGA
CACTTGGGAGGAAGGTGTTTGGACGGCGCTCTGGAGTTAAGAGATCAGAG
CTTGAGGGAGGTTTGTAA back to topprotein sequence of Ggra10122.t1 >Ggra10122.t1 ID=Ggra10122.t1|Name=Ggra10122.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=756bp
MAGTDFICVYCQETLQEGEAVRFIEECQHFCHVTCQPPARCPFDDQHLDL
HAASNAPSLPFSLECGSRFERLREKRSHAASCRNIAWILLHERNKSEKAL
LWLNKAIKKTPPSANALLDLADWYERGFAVICDTSHARDLRKKAQILLDD
LNERNERFISNGEEGQVQTNQAQEDPAHDYQPDDGHPASSLQQQSKPYGQ
QPSSQVPHNPEYSLPGHTAVDDHLSRKDPQLNPQVATETNLSDVSSAVSS
EGREMNAQGLRTDTLVHKASHADIAYPGEVNNGEHMNQSLVTPEHGPRGC
EASNDSRSLGGAQRNVEESAFYPQKDDHLSPRDDVAACTSVRKQQHMPHV
GLGSRPSLNPLHNPKSTNRKDGEWESHFTADQGSGSAADPIQDASSSQWT
PTWPMNEYRELSESFSSEQNDEHRFARPLTEEKHGEVPEPLNTTARTEMQ
GSWTSVPGRASQSGGTVGSGYESPLIPDRNNQANHIRPDISSSIDGTHVS
PGAPPVAEPITGEPPGLHIFMARLKQARMSGEPLSSGSEYVRRDCAEDDT
PAFSRREGEYARDSNEYASDRHYYSTGTPSFEKESYPPPPGSVQSDGARA
SASTASVQFVFPAVGKFRDMFGRIPEVGQETVSNYVEAAKRLRKLKEKIM
ELQERRESYWHRQAANVVVAVPAAVFTSGFSTIASGSALIHQRNRLEQLK
KCVRDIIKQINEIRSSFAEFEDTPEWKAAEDSVTLGRKVFGRRSGVKRSE
LEGGL* back to topmRNA from alignment at tig00000113_pilon:241685..243952+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10122.t1 ID=Ggra10122.t1|Name=Ggra10122.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2268bp|location=Sequence derived from alignment at tig00000113_pilon:241685..243952+ (Gracilaria gracilis GNS1m male)
ATGGCCGGGACCGACTTCATCTGCGTTTACTGCCAGGAAACACTTCAAGA
GGGGGAGGCCGTCCGCTTCATCGAGGAGTGCCAGCACTTCTGTCATGTCA
CATGCCAGCCCCCAGCACGCTGTCCGTTCGACGACCAACATCTCGACCTT
CACGCAGCCTCCAACGCACCCTCGTTGCCGTTCTCATTGGAATGCGGCTC
ACGTTTCGAGCGCCTTCGCGAGAAGCGCTCTCACGCCGCCTCGTGCCGCA
ACATTGCCTGGATTCTGTTGCATGAGCGGAACAAATCAGAAAAGGCCCTC
TTGTGGCTCAACAAAGCCATCAAGAAGACCCCACCCTCCGCCAACGCGCT
TCTAGACCTCGCCGACTGGTACGAAAGAGGTTTTGCCGTAATCTGCGATA
CTTCTCACGCACGTGATTTGCGAAAGAAGGCACAGATACTGCTTGACGAT
CTGAACGAGCGAAACGAACGCTTTATCAGTAACGGCGAAGAAGGGCAAGT
CCAAACCAACCAAGCCCAGGAAGACCCAGCTCACGATTACCAACCCGATG
ATGGCCACCCCGCTTCTTCTCTCCAACAACAATCAAAGCCATATGGCCAG
CAACCCAGTTCCCAAGTCCCGCACAATCCTGAATACTCTCTGCCTGGGCA
TACTGCGGTAGACGATCACCTTTCGCGGAAAGATCCTCAACTCAACCCCC
AAGTAGCGACAGAAACTAATTTGAGCGATGTCTCTTCTGCAGTTTCTAGC
GAAGGAAGGGAAATGAATGCTCAGGGCTTGCGGACAGATACTCTCGTTCA
TAAAGCATCCCATGCCGACATTGCGTATCCGGGTGAAGTCAATAATGGTG
AGCATATGAATCAAAGTCTGGTCACTCCCGAACATGGACCCAGAGGCTGT
GAGGCCAGTAATGATTCCCGCTCTTTGGGGGGCGCCCAGCGTAATGTCGA
AGAAAGTGCGTTTTATCCCCAAAAAGATGATCATCTTAGTCCAAGAGACG
ACGTTGCGGCTTGCACATCAGTTAGAAAGCAACAGCACATGCCCCATGTG
GGCTTGGGTAGTCGCCCTTCTCTAAATCCTCTTCACAATCCTAAATCTAC
AAACCGAAAGGATGGTGAATGGGAATCACATTTCACGGCTGATCAAGGGA
GTGGCTCCGCAGCAGATCCGATTCAGGATGCTTCATCTAGCCAATGGACT
CCAACTTGGCCTATGAACGAATACAGAGAACTCTCAGAGTCCTTCAGTTC
CGAGCAAAACGATGAACACCGTTTTGCGAGACCGTTGACGGAAGAGAAAC
ATGGGGAAGTTCCTGAGCCATTGAATACTACCGCAAGAACCGAAATGCAG
GGCTCCTGGACCTCTGTCCCGGGACGAGCATCACAGTCAGGGGGCACTGT
AGGATCTGGTTATGAGAGTCCTTTGATTCCGGACAGGAATAACCAAGCCA
ATCATATCCGGCCTGATATTTCTTCATCAATCGACGGAACACATGTTTCG
CCTGGGGCTCCTCCGGTAGCGGAGCCAATAACTGGAGAACCACCAGGACT
TCATATTTTTATGGCCCGATTGAAACAGGCAAGAATGAGTGGAGAACCGT
TATCATCAGGCTCTGAATATGTTCGCAGAGATTGTGCCGAAGACGACACT
CCGGCTTTCTCACGGAGGGAAGGCGAATATGCACGGGATTCAAATGAATA
CGCATCTGATAGGCACTATTACTCGACTGGAACTCCAAGTTTCGAGAAGG
AATCATACCCGCCCCCGCCTGGGAGTGTGCAAAGCGATGGAGCACGTGCA
AGTGCGTCCACGGCTTCTGTTCAGTTCGTATTTCCTGCGGTAGGAAAGTT
CAGGGACATGTTTGGGCGAATTCCAGAGGTGGGTCAAGAGACGGTGAGCA
ACTACGTGGAAGCTGCAAAGCGACTGCGAAAACTGAAGGAAAAGATCATG
GAACTTCAGGAGAGGCGTGAATCATACTGGCATCGACAGGCAGCAAATGT
TGTTGTAGCGGTACCTGCTGCTGTGTTTACCTCCGGATTCTCAACAATAG
CGAGCGGATCGGCACTCATCCATCAGAGAAACCGACTGGAGCAACTGAAG
AAATGCGTTCGAGACATCATCAAACAGATCAATGAGATCCGGTCATCGTT
CGCTGAATTCGAAGACACACCTGAATGGAAGGCTGCGGAAGACTCTGTGA
CACTTGGGAGGAAGGTGTTTGGACGGCGCTCTGGAGTTAAGAGATCAGAG
CTTGAGGGAGGTTTGTAA back to topCoding sequence (CDS) from alignment at tig00000113_pilon:241685..243952+ >Ggra10122.t1 ID=Ggra10122.t1|Name=Ggra10122.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2268bp|location=Sequence derived from alignment at tig00000113_pilon:241685..243952+ (Gracilaria gracilis GNS1m male)
ATGGCCGGGACCGACTTCATCTGCGTTTACTGCCAGGAAACACTTCAAGA
GGGGGAGGCCGTCCGCTTCATCGAGGAGTGCCAGCACTTCTGTCATGTCA
CATGCCAGCCCCCAGCACGCTGTCCGTTCGACGACCAACATCTCGACCTT
CACGCAGCCTCCAACGCACCCTCGTTGCCGTTCTCATTGGAATGCGGCTC
ACGTTTCGAGCGCCTTCGCGAGAAGCGCTCTCACGCCGCCTCGTGCCGCA
ACATTGCCTGGATTCTGTTGCATGAGCGGAACAAATCAGAAAAGGCCCTC
TTGTGGCTCAACAAAGCCATCAAGAAGACCCCACCCTCCGCCAACGCGCT
TCTAGACCTCGCCGACTGGTACGAAAGAGGTTTTGCCGTAATCTGCGATA
CTTCTCACGCACGTGATTTGCGAAAGAAGGCACAGATACTGCTTGACGAT
CTGAACGAGCGAAACGAACGCTTTATCAGTAACGGCGAAGAAGGGCAAGT
CCAAACCAACCAAGCCCAGGAAGACCCAGCTCACGATTACCAACCCGATG
ATGGCCACCCCGCTTCTTCTCTCCAACAACAATCAAAGCCATATGGCCAG
CAACCCAGTTCCCAAGTCCCGCACAATCCTGAATACTCTCTGCCTGGGCA
TACTGCGGTAGACGATCACCTTTCGCGGAAAGATCCTCAACTCAACCCCC
AAGTAGCGACAGAAACTAATTTGAGCGATGTCTCTTCTGCAGTTTCTAGC
GAAGGAAGGGAAATGAATGCTCAGGGCTTGCGGACAGATACTCTCGTTCA
TAAAGCATCCCATGCCGACATTGCGTATCCGGGTGAAGTCAATAATGGTG
AGCATATGAATCAAAGTCTGGTCACTCCCGAACATGGACCCAGAGGCTGT
GAGGCCAGTAATGATTCCCGCTCTTTGGGGGGCGCCCAGCGTAATGTCGA
AGAAAGTGCGTTTTATCCCCAAAAAGATGATCATCTTAGTCCAAGAGACG
ACGTTGCGGCTTGCACATCAGTTAGAAAGCAACAGCACATGCCCCATGTG
GGCTTGGGTAGTCGCCCTTCTCTAAATCCTCTTCACAATCCTAAATCTAC
AAACCGAAAGGATGGTGAATGGGAATCACATTTCACGGCTGATCAAGGGA
GTGGCTCCGCAGCAGATCCGATTCAGGATGCTTCATCTAGCCAATGGACT
CCAACTTGGCCTATGAACGAATACAGAGAACTCTCAGAGTCCTTCAGTTC
CGAGCAAAACGATGAACACCGTTTTGCGAGACCGTTGACGGAAGAGAAAC
ATGGGGAAGTTCCTGAGCCATTGAATACTACCGCAAGAACCGAAATGCAG
GGCTCCTGGACCTCTGTCCCGGGACGAGCATCACAGTCAGGGGGCACTGT
AGGATCTGGTTATGAGAGTCCTTTGATTCCGGACAGGAATAACCAAGCCA
ATCATATCCGGCCTGATATTTCTTCATCAATCGACGGAACACATGTTTCG
CCTGGGGCTCCTCCGGTAGCGGAGCCAATAACTGGAGAACCACCAGGACT
TCATATTTTTATGGCCCGATTGAAACAGGCAAGAATGAGTGGAGAACCGT
TATCATCAGGCTCTGAATATGTTCGCAGAGATTGTGCCGAAGACGACACT
CCGGCTTTCTCACGGAGGGAAGGCGAATATGCACGGGATTCAAATGAATA
CGCATCTGATAGGCACTATTACTCGACTGGAACTCCAAGTTTCGAGAAGG
AATCATACCCGCCCCCGCCTGGGAGTGTGCAAAGCGATGGAGCACGTGCA
AGTGCGTCCACGGCTTCTGTTCAGTTCGTATTTCCTGCGGTAGGAAAGTT
CAGGGACATGTTTGGGCGAATTCCAGAGGTGGGTCAAGAGACGGTGAGCA
ACTACGTGGAAGCTGCAAAGCGACTGCGAAAACTGAAGGAAAAGATCATG
GAACTTCAGGAGAGGCGTGAATCATACTGGCATCGACAGGCAGCAAATGT
TGTTGTAGCGGTACCTGCTGCTGTGTTTACCTCCGGATTCTCAACAATAG
CGAGCGGATCGGCACTCATCCATCAGAGAAACCGACTGGAGCAACTGAAG
AAATGCGTTCGAGACATCATCAAACAGATCAATGAGATCCGGTCATCGTT
CGCTGAATTCGAAGACACACCTGAATGGAAGGCTGCGGAAGACTCTGTGA
CACTTGGGAGGAAGGTGTTTGGACGGCGCTCTGGAGTTAAGAGATCAGAG
CTTGAGGGAGGTTTGTAA back to top
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