Ggra10434.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10434.t1
Unique NameGgra10434.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length289
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:304260..305126 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10434Ggra10434Gracilaria gracilis GNS1m malegenetig00000108_pilon 304260..305126 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10434.t1.start1Ggra10434.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000108_pilon 304260..304262 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10434.t1.CDS1Ggra10434.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000108_pilon 304260..305126 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10434.t1.exon1Ggra10434.t1.exon1Gracilaria gracilis GNS1m maleexontig00000108_pilon 304260..305126 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10434.t1.stop1Ggra10434.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000108_pilon 305124..305126 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10434.t1Ggra10434.t1Gracilaria gracilis GNS1m malepolypeptidetig00000108_pilon 304260..305126 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10434.t1 ID=Ggra10434.t1|Name=Ggra10434.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=289bp
MSAPRPPPADADAPDVPDAPDVPDARDARDARDAPNAPALSRLPDDVLLH
ICRFVPSATLHALCSASSRWRQLIQRSVWPARLATLLGVRAVRFRARTAL
PRTLRVLARPASAPPAAWLQLLRVLERAPSARVLCVCVLLGAQPQPLSVT
ALALRYAVSVNDILRANALFAEHQLASRTHVYVPLRDERALCAATGRGSA
AHTPVLVRDVTLSNKYFLVVRFCGAHERADSPEAMRASQRTYVRQLLVRL
MAKGLSVLEDEVRYYLEENEYDVAKAYKQLLDDHQFAP*
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spliced messenger RNA

>Ggra10434.t1 ID=Ggra10434.t1|Name=Ggra10434.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=867bp|location=Sequence derived from alignment at tig00000108_pilon:304260..305126+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGCGCCGCGCCCGCCGCCAGCAGACGCCGACGCGCCCGACGTGCC
CGACGCGCCCGACGTGCCCGACGCGCGCGATGCGCGCGATGCGCGCGATG
CGCCCAACGCGCCGGCGCTGAGCCGGCTGCCCGACGACGTGCTGCTGCAC
ATCTGTCGCTTCGTGCCGTCGGCCACGCTGCACGCGCTTTGCAGCGCGTC
TTCGCGCTGGCGGCAGCTAATCCAGCGCAGCGTGTGGCCGGCGCGACTGG
CCACGCTGCTCGGCGTGCGCGCGGTACGCTTCCGCGCGCGCACGGCGCTA
CCGCGCACGCTACGCGTACTGGCGCGGCCCGCGAGCGCGCCGCCCGCCGC
GTGGCTGCAGCTGCTGCGCGTGCTGGAGCGCGCTCCGTCGGCGCGTGTGC
TGTGCGTGTGCGTGCTGCTGGGCGCGCAGCCGCAACCGCTGTCCGTCACC
GCGCTCGCGCTGCGCTACGCCGTGTCGGTGAACGACATCCTGCGCGCAAA
CGCGCTGTTTGCAGAGCATCAGCTGGCGTCGCGCACGCATGTTTACGTGC
CGCTGCGCGATGAGCGCGCGCTGTGCGCAGCGACGGGGCGCGGCAGCGCG
GCGCATACGCCCGTGTTGGTGCGCGATGTGACGCTGTCCAACAAGTACTT
TCTGGTGGTGCGCTTTTGCGGCGCGCACGAGCGCGCCGACTCGCCGGAGG
CGATGCGCGCTTCGCAGCGCACGTACGTGCGCCAGCTGCTGGTGCGGCTC
ATGGCCAAGGGGCTGTCGGTGCTGGAGGACGAGGTGCGCTACTATCTGGA
GGAGAACGAGTACGATGTGGCCAAGGCGTACAAGCAGCTCCTGGACGACC
ATCAGTTTGCGCCGTGA
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protein sequence of Ggra10434.t1

>Ggra10434.t1 ID=Ggra10434.t1|Name=Ggra10434.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=289bp
MSAPRPPPADADAPDVPDAPDVPDARDARDARDAPNAPALSRLPDDVLLH
ICRFVPSATLHALCSASSRWRQLIQRSVWPARLATLLGVRAVRFRARTAL
PRTLRVLARPASAPPAAWLQLLRVLERAPSARVLCVCVLLGAQPQPLSVT
ALALRYAVSVNDILRANALFAEHQLASRTHVYVPLRDERALCAATGRGSA
AHTPVLVRDVTLSNKYFLVVRFCGAHERADSPEAMRASQRTYVRQLLVRL
MAKGLSVLEDEVRYYLEENEYDVAKAYKQLLDDHQFAP*
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mRNA from alignment at tig00000108_pilon:304260..305126+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10434.t1 ID=Ggra10434.t1|Name=Ggra10434.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=867bp|location=Sequence derived from alignment at tig00000108_pilon:304260..305126+ (Gracilaria gracilis GNS1m male)
ATGAGCGCGCCGCGCCCGCCGCCAGCAGACGCCGACGCGCCCGACGTGCC
CGACGCGCCCGACGTGCCCGACGCGCGCGATGCGCGCGATGCGCGCGATG
CGCCCAACGCGCCGGCGCTGAGCCGGCTGCCCGACGACGTGCTGCTGCAC
ATCTGTCGCTTCGTGCCGTCGGCCACGCTGCACGCGCTTTGCAGCGCGTC
TTCGCGCTGGCGGCAGCTAATCCAGCGCAGCGTGTGGCCGGCGCGACTGG
CCACGCTGCTCGGCGTGCGCGCGGTACGCTTCCGCGCGCGCACGGCGCTA
CCGCGCACGCTACGCGTACTGGCGCGGCCCGCGAGCGCGCCGCCCGCCGC
GTGGCTGCAGCTGCTGCGCGTGCTGGAGCGCGCTCCGTCGGCGCGTGTGC
TGTGCGTGTGCGTGCTGCTGGGCGCGCAGCCGCAACCGCTGTCCGTCACC
GCGCTCGCGCTGCGCTACGCCGTGTCGGTGAACGACATCCTGCGCGCAAA
CGCGCTGTTTGCAGAGCATCAGCTGGCGTCGCGCACGCATGTTTACGTGC
CGCTGCGCGATGAGCGCGCGCTGTGCGCAGCGACGGGGCGCGGCAGCGCG
GCGCATACGCCCGTGTTGGTGCGCGATGTGACGCTGTCCAACAAGTACTT
TCTGGTGGTGCGCTTTTGCGGCGCGCACGAGCGCGCCGACTCGCCGGAGG
CGATGCGCGCTTCGCAGCGCACGTACGTGCGCCAGCTGCTGGTGCGGCTC
ATGGCCAAGGGGCTGTCGGTGCTGGAGGACGAGGTGCGCTACTATCTGGA
GGAGAACGAGTACGATGTGGCCAAGGCGTACAAGCAGCTCCTGGACGACC
ATCAGTTTGCGCCGTGA
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Coding sequence (CDS) from alignment at tig00000108_pilon:304260..305126+

>Ggra10434.t1 ID=Ggra10434.t1|Name=Ggra10434.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=867bp|location=Sequence derived from alignment at tig00000108_pilon:304260..305126+ (Gracilaria gracilis GNS1m male)
ATGAGCGCGCCGCGCCCGCCGCCAGCAGACGCCGACGCGCCCGACGTGCC
CGACGCGCCCGACGTGCCCGACGCGCGCGATGCGCGCGATGCGCGCGATG
CGCCCAACGCGCCGGCGCTGAGCCGGCTGCCCGACGACGTGCTGCTGCAC
ATCTGTCGCTTCGTGCCGTCGGCCACGCTGCACGCGCTTTGCAGCGCGTC
TTCGCGCTGGCGGCAGCTAATCCAGCGCAGCGTGTGGCCGGCGCGACTGG
CCACGCTGCTCGGCGTGCGCGCGGTACGCTTCCGCGCGCGCACGGCGCTA
CCGCGCACGCTACGCGTACTGGCGCGGCCCGCGAGCGCGCCGCCCGCCGC
GTGGCTGCAGCTGCTGCGCGTGCTGGAGCGCGCTCCGTCGGCGCGTGTGC
TGTGCGTGTGCGTGCTGCTGGGCGCGCAGCCGCAACCGCTGTCCGTCACC
GCGCTCGCGCTGCGCTACGCCGTGTCGGTGAACGACATCCTGCGCGCAAA
CGCGCTGTTTGCAGAGCATCAGCTGGCGTCGCGCACGCATGTTTACGTGC
CGCTGCGCGATGAGCGCGCGCTGTGCGCAGCGACGGGGCGCGGCAGCGCG
GCGCATACGCCCGTGTTGGTGCGCGATGTGACGCTGTCCAACAAGTACTT
TCTGGTGGTGCGCTTTTGCGGCGCGCACGAGCGCGCCGACTCGCCGGAGG
CGATGCGCGCTTCGCAGCGCACGTACGTGCGCCAGCTGCTGGTGCGGCTC
ATGGCCAAGGGGCTGTCGGTGCTGGAGGACGAGGTGCGCTACTATCTGGA
GGAGAACGAGTACGATGTGGCCAAGGCGTACAAGCAGCTCCTGGACGACC
ATCAGTTTGCGCCGTGA
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