Ggra7513.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7513.t1
Unique NameGgra7513.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length265
Homology
BLAST of Ggra7513.t1 vs. uniprot
Match: A0A2V3IQ21 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ21_9FLOR)

HSP 1 Score: 181 bits (460), Expect = 5.220e-53
Identity = 101/171 (59.06%), Postives = 119/171 (69.59%), Query Frame = 0
Query:   89 VDALVSEPAITQRVELRLELPDGSVRSLTLALYGELAPATTANFAALVAARAYDDTRVYRVLPQLTVQLGDTLRNGGASGAAATADGRLRAENWRLSHSAPGVLSMVVAHGYVDSRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELERAVAAEQRSLVRRPVRARIVT 259
            VD   +EPAIT RV + L+  +G    LT+ALYG + P T  NF  L+    Y DT+VYRV+  LT+QLGD LRNGG SG AAT  G L AEN+R+SHS PG+LSMVV  G VDSRFFVTTR GDSRYLDGRYVAFGRV+ G+D L+EL+R         VRRPV  RI +
Sbjct:   74 VDVAENEPAITNRVFIDLQQANGRTGRLTIALYGTVVPDTVDNFLRLID-NGYRDTKVYRVVNGLTIQLGDVLRNGGKSGRAATETGVLEAENYRISHSVPGILSMVVKDGMVDSRFFVTTRPGDSRYLDGRYVAFGRVESGMDTLYELDRI--PNSNGFVRRPVSVRIAS 241          
BLAST of Ggra7513.t1 vs. uniprot
Match: R7QK13 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK13_CHOCR)

HSP 1 Score: 145 bits (365), Expect = 1.340e-38
Identity = 88/154 (57.14%), Postives = 106/154 (68.83%), Query Frame = 0
Query:   88 DVDALVSEPAITQRVELRLELPDGSVRS-LTLALYGELAPATTANFAALVAARAYDDTRVYRVLPQLTVQLGDTLRNGGASGAAATADGRLRAENWRLSHSAPGVLSMVVA-HGYVDSRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELER 239
            D+D   +EP IT RV L L L DGSV   +T+ LYG++ PAT ANF AL+ +  Y  T VYRV+P LTVQLGD L+NGG SG AATADG L  EN R+ H+ PG++SMV    G  DSRFFV TR GDS YLDGRY AFGRV   +   +++ER
Sbjct:   98 DIDPGSAEPKITDRVFLDLRL-DGSVAERVTIGLYGDVTPATVANFKALLQS-GYVGTSVYRVVPGLTVQLGDVLKNGGRSGRAATADGSLALENVRVRHTIPGLVSMVRGVDGRGDSRFFVNTRPGDSGYLDGRYCAFGRVLENMAFWYKVER 249          
BLAST of Ggra7513.t1 vs. uniprot
Match: K8YUC4 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUC4_NANGC)

HSP 1 Score: 90.9 bits (224), Expect = 2.690e-18
Identity = 61/150 (40.67%), Postives = 87/150 (58.00%), Query Frame = 0
Query:   93 VSEPAITQRVELRLELPDGSVRSLTLALYGELAPATTANFAALVAARAYDDTRVYRVLPQLTVQLGDT-LRNGGASGAAATADGR-LRAENWRLSHSAPGVLSMVV-AHGYVDSRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELER 239
            ++EPA+T    L       +   + ++LYG++ P T ANF AL     Y  + VYRVL   ++Q+GD   +  GA+G ++   G  L  E  R+ HS  G+LSMV    G VDSRFF+   + D  + DGRYVAFGRV +GL+ L E+E+
Sbjct:   65 ITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCR-DGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGK-DGSWADGRYVAFGRVTKGLEVLKEVEK 212          
BLAST of Ggra7513.t1 vs. uniprot
Match: A0A7S0E7G2 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E7G2_9CRYP)

HSP 1 Score: 91.7 bits (226), Expect = 4.320e-18
Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 0
Query:  116 LTLALYGELAPATTANFAALVAAR---AYDDTRVYRVLPQLTVQLGDTLRNGGASGAAATADGR-LRAENWRLSHSAPGVLSMV-VAHGYVDSRFFVTTRR----GDSRYLDGRYVAFGRVQRGLDALFELERAVAAEQRS 247
            + +ALYG + P T  NF  LV       Y  T  YR++  L +  GD L+N G SG  A  DG     EN+++ H+APG++SM       VDSRFF++TRR    G S+  D +YVAFG+V  GLD +   ER  A E +S
Sbjct:  139 IVIALYGNIVPKTVENFKGLVKGSPGYGYKGTEFYRIVQGLQISAGDVLKNNGRSGKPAINDGEPFEQENFKIMHTAPGIVSMQNTLEKTVDSRFFISTRREVDQGYSKIFDNKYVAFGKVIEGLDVV---ERIDALETKS 276          
BLAST of Ggra7513.t1 vs. uniprot
Match: W7TLX5 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLX5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.140e-18
Identity = 61/150 (40.67%), Postives = 87/150 (58.00%), Query Frame = 0
Query:   93 VSEPAITQRVELRLELPDGSVRSLTLALYGELAPATTANFAALVAARAYDDTRVYRVLPQLTVQLGDT-LRNGGASGAAATADGR-LRAENWRLSHSAPGVLSMVV-AHGYVDSRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELER 239
            ++EPA+T    L       +   + ++LYG++ P T ANF AL     Y  + VYRVL   ++Q+GD   +  GA+G ++   G  L  E  R+ HS  G+LSMV    G VDSRFF+   + D  + DGRYVAFGRV +GL+ L E+E+
Sbjct:  130 ITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCR-DGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGK-DGSWADGRYVAFGRVTKGLEVLKEVEK 277          
BLAST of Ggra7513.t1 vs. uniprot
Match: A0A5J4Z0I4 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0I4_PORPP)

HSP 1 Score: 88.2 bits (217), Expect = 8.830e-18
Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 0
Query:  116 LTLALYGELAPATTANFAALVAAR---AYDDTRVYRVLPQLTVQLGDTLRNGGASGAAATADGRLRAENWRLSHSAPGVLSMVVAH-GYVDSRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELERAVAAEQRSLVRRPV 253
            + + L+G++AP T  NF  L+  +    Y  +  YRV+  LTVQ GD   + G  G A    G    EN+ L HS  G++SM  A  G  DSRF + T+  DS YLDGRY+AFGRV  G+  ++ +E       ++  ++PV
Sbjct:   13 IVIGLFGDVAPTTVQNFVGLITDKEGAGYRGSSFYRVVSGLTVQGGDIPSSKGKQGRAILPGGSYMPENFDLRHSVAGLISMCHARDGKADSRFLIQTK-ADSGYLDGRYIAFGRVLEGMSVIYHMEEIGGVGPQNRPKQPV 153          
BLAST of Ggra7513.t1 vs. uniprot
Match: A0A7S4KVK6 (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KVK6_GUITH)

HSP 1 Score: 89.7 bits (221), Expect = 3.100e-17
Identity = 57/151 (37.75%), Postives = 81/151 (53.64%), Query Frame = 0
Query:   98 ITQRVELRLELPDGSVRS-LTLALYGELAPATTANFAALVAAR---AYDDTRVYRVLPQLTVQLGDTLRNGGASGAAATADGR-LRAENWRLSHSAPGVLSMV-VAHGYVDSRFFVTTRR----GDSRYLDGRYVAFGRVQRGLDALFELE 238
            +T +    + + D    S + + LYG + P T  NF  LV       Y  T  YR++  L +  GD L N G SG  A  DG     EN+++ H+APG++SM       VDSRFF++TRR    G S+  D +YVAFG+V  GLD + +L+
Sbjct:  147 VTDKAYFDVSIGDSKNTSRIVIGLYGGIVPKTVENFKGLVKGSPGYGYKGTEFYRIVQGLQISAGDVLNNNGRSGKPAINDGEPFEQENFKIMHTAPGIVSMQNTLEKTVDSRFFISTRREIDMGYSKIFDNKYVAFGKVIEGLDVIEKLD 297          
BLAST of Ggra7513.t1 vs. uniprot
Match: A0A168T9H0 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168T9H0_ABSGL)

HSP 1 Score: 84.0 bits (206), Expect = 6.360e-16
Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = 0
Query:   94 SEPAITQRVELRLELPDGSVRSLTLALYGELAPATTANFAALVAAR---AYDDTRVYRVLPQLTVQLGDTLRNGGASGAAATADGRLRAENWRLSHSAPGVLSMVVAHGYVD-SRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELE 238
            ++P IT +V   ++  D  +  + + LYGE+ P T  NF AL        Y  ++ +RV+    +Q GD   + G  G +     +   EN+ L+H+ PGVLSM  A    + S+FF+TT +  + +LDGR+V FG+V  G+D + ++E
Sbjct:   27 TDPVITHKVYFDMKQGDEDLGRIVIGLYGEVVPKTAENFRALATGEKGFGYKGSQFHRVIKSFMIQGGDFTNHDGTGGKSIYEKSKFDDENFELTHTGPGVLSMANAGKNTNGSQFFITTVK--TGWLDGRHVVFGKVVEGMDVVSKIE 173          
BLAST of Ggra7513.t1 vs. uniprot
Match: A0A168QYH7 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168QYH7_ABSGL)

HSP 1 Score: 82.0 bits (201), Expect = 8.240e-15
Identity = 52/149 (34.90%), Postives = 83/149 (55.70%), Query Frame = 0
Query:   96 PAITQRVELRLELPDGSVRSLTLALYGELAPATTANFAALVAAR---AYDDTRVYRVLPQLTVQLGDTLRNGGASGAAATADGRLRAENWRLSHSAPGVLSMVVAHGYVD-SRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELERA 240
            P IT +V   ++  D  +  + + LYG+  P TT NF AL        Y  +  +RV+    +Q GD   NG  +G  +  +G+   EN++L+H+ PGVLSM  +    + S+FF+TT +  + +LDGR+V FG V  G+D + ++E A
Sbjct:   88 PLITNKVYFDIKHGDEDLGRIVIGLYGKTVPKTTENFRALATGEKGFGYKGSSFHRVIKSFMIQGGD-FTNGDGTGGKSIYEGKFADENFKLTHTGPGVLSMANSGKDTNGSQFFITTVK--TTWLDGRHVVFGIVLEGMDIVTKIENA 233          
BLAST of Ggra7513.t1 vs. uniprot
Match: A0A8H7S1V3 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S1V3_9FUNG)

HSP 1 Score: 80.9 bits (198), Expect = 8.310e-15
Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 0
Query:   96 PAITQRVELRLELPDGSVRSLTLALYGELAPATTANFAALVAAR---AYDDTRVYRVLPQLTVQLGDTLRNGGASGAAATADGRLRAENWRLSHSAPGVLSMVVAHGYVD-SRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELE 238
            P +T +V   ++  D  +  + + LYG   P T  NF AL        Y  ++ +RV+ Q  +Q GD     G  G +     +   EN++L+H+ PGVLSM  A    + S+FF+TT +  + +LDGR+V FG+V  G+D + ++E
Sbjct:   29 PLVTNKVYFDIKQGDEDLGRIVIGLYGGTVPKTAENFRALATGEKGFGYKGSKFHRVIKQFMIQGGDFTNGDGTGGKSIYETDKFDDENFKLTHTGPGVLSMANAGRNTNGSQFFITTVK--TSWLDGRHVVFGKVLEGMDIVTKIE 173          
The following BLAST results are available for this feature:
BLAST of Ggra7513.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ215.220e-5359.06Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracil... [more]
R7QK131.340e-3857.14Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondr... [more]
K8YUC42.690e-1840.67Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannoc... [more]
A0A7S0E7G24.320e-1841.84Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hanusi... [more]
W7TLX58.140e-1840.67Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannoc... [more]
A0A5J4Z0I48.830e-1838.03Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphy... [more]
A0A7S4KVK63.100e-1737.75Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A168T9H06.360e-1633.56Peptidyl-prolyl cis-trans isomerase n=1 Tax=Absidi... [more]
A0A168QYH78.240e-1534.90Peptidyl-prolyl cis-trans isomerase n=1 Tax=Absidi... [more]
A0A8H7S1V38.310e-1533.33Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mucor ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 146..158
score: 33.33
coord: 120..135
score: 45.49
coord: 219..234
score: 41.18
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 115..256
e-value: 3.7E-23
score: 82.5
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 103..259
score: 18.410597
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 87..259
e-value: 6.0E-27
score: 96.5
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 112..242
NoneNo IPR availablePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 71..242
NoneNo IPR availablePANTHERPTHR11071:SF479PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 71..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..264
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..32
NoneNo IPR availableCDDcd00317cyclophilincoord: 116..240
e-value: 7.70032E-22
score: 86.5488
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..68
score: 8.124674

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:248834..249628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7513.t1Ggra7513.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 248834..249628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7513.t1 ID=Ggra7513.t1|Name=Ggra7513.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=265bp
MRRVPAATPAFAPAPARAPIAPMRAASAAACADAPRARHTRRRFVQLLAA
APLAPLAAVAAAAAPAPALSPRAAETADADGAVGAVGDVDALVSEPAITQ
RVELRLELPDGSVRSLTLALYGELAPATTANFAALVAARAYDDTRVYRVL
PQLTVQLGDTLRNGGASGAAATADGRLRAENWRLSHSAPGVLSMVVAHGY
VDSRFFVTTRRGDSRYLDGRYVAFGRVQRGLDALFELERAVAAEQRSLVR
RPVRARIVTARLLQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf
IPR006311TAT_signal