Ggra10893.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10893.t1
Unique NameGgra10893.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length227
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000098_piloncontigtig00000098_pilon:35303..35983 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10893Ggra10893Gracilaria gracilis GNS1m malegenetig00000098_pilon 35303..35983 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10893.t1.stop1Ggra10893.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000098_pilon 35303..35305 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10893.t1.CDS1Ggra10893.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000098_pilon 35303..35983 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10893.t1.exon1Ggra10893.t1.exon1Gracilaria gracilis GNS1m maleexontig00000098_pilon 35303..35983 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10893.t1.start1Ggra10893.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000098_pilon 35981..35983 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10893.t1Ggra10893.t1Gracilaria gracilis GNS1m malepolypeptidetig00000098_pilon 35303..35983 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10893.t1 ID=Ggra10893.t1|Name=Ggra10893.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=227bp
MSIAGQSTMVRQGPQSVAHIISQAMTRSVARQTDSQVVSSTGEAGPSTAG
EQPQRTSAVDLSAILTVHLNDLRRRWDNALANVKQASLGLDQLVDLMEES
PIKVQMQTAEASLLGTQRTLETLTLLNKQIENLPSSRQSRTTGDQPRKEA
IITMDSVRIPLRRIDHGESAAKTQLSSSSSFWKDNSERQTFSKKTTSRAG
GRECWICKGDHFAYENPPCKKALENK*
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spliced messenger RNA

>Ggra10893.t1 ID=Ggra10893.t1|Name=Ggra10893.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=681bp|location=Sequence derived from alignment at tig00000098_pilon:35303..35983- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCAATAGCAGGACAATCTACAATGGTACGTCAAGGACCTCAATCAGT
AGCACACATTATCAGTCAAGCAATGACACGAAGTGTTGCGCGTCAAACCG
ACTCTCAGGTTGTGAGCTCTACTGGTGAAGCAGGACCGAGCACCGCAGGT
GAGCAACCACAGCGTACAAGTGCAGTAGATTTGAGCGCTATTTTGACGGT
TCACCTCAATGATCTTCGAAGAAGATGGGACAATGCCTTAGCAAATGTGA
AACAGGCGTCATTGGGTTTGGATCAGCTGGTTGACCTTATGGAGGAATCT
CCAATCAAAGTACAAATGCAAACGGCTGAAGCATCACTGTTAGGAACTCA
GCGAACACTAGAAACATTGACGCTACTGAATAAGCAGATTGAAAATCTAC
CATCTTCACGACAAAGTAGAACCACAGGTGACCAACCTCGAAAAGAAGCT
ATTATTACCATGGATTCAGTTCGTATCCCACTGAGAAGGATCGATCACGG
TGAGTCAGCTGCCAAAACACAACTGAGCTCTAGCAGTTCTTTTTGGAAGG
ATAATTCAGAGCGACAAACTTTCAGCAAGAAGACCACCTCAAGGGCTGGT
GGACGAGAGTGCTGGATCTGCAAGGGAGATCACTTCGCTTATGAGAACCC
GCCATGCAAGAAGGCTCTGGAAAACAAGTGA
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protein sequence of Ggra10893.t1

>Ggra10893.t1 ID=Ggra10893.t1|Name=Ggra10893.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=227bp
MSIAGQSTMVRQGPQSVAHIISQAMTRSVARQTDSQVVSSTGEAGPSTAG
EQPQRTSAVDLSAILTVHLNDLRRRWDNALANVKQASLGLDQLVDLMEES
PIKVQMQTAEASLLGTQRTLETLTLLNKQIENLPSSRQSRTTGDQPRKEA
IITMDSVRIPLRRIDHGESAAKTQLSSSSSFWKDNSERQTFSKKTTSRAG
GRECWICKGDHFAYENPPCKKALENK*
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mRNA from alignment at tig00000098_pilon:35303..35983-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10893.t1 ID=Ggra10893.t1|Name=Ggra10893.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=681bp|location=Sequence derived from alignment at tig00000098_pilon:35303..35983- (Gracilaria gracilis GNS1m male)
ATGTCAATAGCAGGACAATCTACAATGGTACGTCAAGGACCTCAATCAGT
AGCACACATTATCAGTCAAGCAATGACACGAAGTGTTGCGCGTCAAACCG
ACTCTCAGGTTGTGAGCTCTACTGGTGAAGCAGGACCGAGCACCGCAGGT
GAGCAACCACAGCGTACAAGTGCAGTAGATTTGAGCGCTATTTTGACGGT
TCACCTCAATGATCTTCGAAGAAGATGGGACAATGCCTTAGCAAATGTGA
AACAGGCGTCATTGGGTTTGGATCAGCTGGTTGACCTTATGGAGGAATCT
CCAATCAAAGTACAAATGCAAACGGCTGAAGCATCACTGTTAGGAACTCA
GCGAACACTAGAAACATTGACGCTACTGAATAAGCAGATTGAAAATCTAC
CATCTTCACGACAAAGTAGAACCACAGGTGACCAACCTCGAAAAGAAGCT
ATTATTACCATGGATTCAGTTCGTATCCCACTGAGAAGGATCGATCACGG
TGAGTCAGCTGCCAAAACACAACTGAGCTCTAGCAGTTCTTTTTGGAAGG
ATAATTCAGAGCGACAAACTTTCAGCAAGAAGACCACCTCAAGGGCTGGT
GGACGAGAGTGCTGGATCTGCAAGGGAGATCACTTCGCTTATGAGAACCC
GCCATGCAAGAAGGCTCTGGAAAACAAGTGA
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Coding sequence (CDS) from alignment at tig00000098_pilon:35303..35983-

>Ggra10893.t1 ID=Ggra10893.t1|Name=Ggra10893.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=681bp|location=Sequence derived from alignment at tig00000098_pilon:35303..35983- (Gracilaria gracilis GNS1m male)
ATGTCAATAGCAGGACAATCTACAATGGTACGTCAAGGACCTCAATCAGT
AGCACACATTATCAGTCAAGCAATGACACGAAGTGTTGCGCGTCAAACCG
ACTCTCAGGTTGTGAGCTCTACTGGTGAAGCAGGACCGAGCACCGCAGGT
GAGCAACCACAGCGTACAAGTGCAGTAGATTTGAGCGCTATTTTGACGGT
TCACCTCAATGATCTTCGAAGAAGATGGGACAATGCCTTAGCAAATGTGA
AACAGGCGTCATTGGGTTTGGATCAGCTGGTTGACCTTATGGAGGAATCT
CCAATCAAAGTACAAATGCAAACGGCTGAAGCATCACTGTTAGGAACTCA
GCGAACACTAGAAACATTGACGCTACTGAATAAGCAGATTGAAAATCTAC
CATCTTCACGACAAAGTAGAACCACAGGTGACCAACCTCGAAAAGAAGCT
ATTATTACCATGGATTCAGTTCGTATCCCACTGAGAAGGATCGATCACGG
TGAGTCAGCTGCCAAAACACAACTGAGCTCTAGCAGTTCTTTTTGGAAGG
ATAATTCAGAGCGACAAACTTTCAGCAAGAAGACCACCTCAAGGGCTGGT
GGACGAGAGTGCTGGATCTGCAAGGGAGATCACTTCGCTTATGAGAACCC
GCCATGCAAGAAGGCTCTGGAAAACAAGTGA
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