Ggra10894.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10894.t1
Unique NameGgra10894.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length137
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000098_piloncontigtig00000098_pilon:36110..36520 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10894Ggra10894Gracilaria gracilis GNS1m malegenetig00000098_pilon 36110..36520 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10894.t1.stop1Ggra10894.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000098_pilon 36110..36112 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10894.t1.CDS1Ggra10894.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000098_pilon 36110..36520 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10894.t1.exon1Ggra10894.t1.exon1Gracilaria gracilis GNS1m maleexontig00000098_pilon 36110..36520 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10894.t1.start1Ggra10894.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000098_pilon 36518..36520 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10894.t1Ggra10894.t1Gracilaria gracilis GNS1m malepolypeptidetig00000098_pilon 36110..36520 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10894.t1 ID=Ggra10894.t1|Name=Ggra10894.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=137bp
MPVYDEGVDVRAYRRAVIDWIELQDFADKNSDRRLSLGQQVFAILGNILG
NANYRLAHISSMVHAEMTREDFGQKFDYILNTIDRNDKETAFLDTSKAWK
ELMLKSHAKRQSFDGYWQEYSSLCTQYAYAHGEVAQ*
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spliced messenger RNA

>Ggra10894.t1 ID=Ggra10894.t1|Name=Ggra10894.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=411bp|location=Sequence derived from alignment at tig00000098_pilon:36110..36520- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCAGTCTATGATGAAGGAGTGGATGTTAGGGCCTACAGAAGAGCTGT
AATCGACTGGATTGAGTTGCAAGATTTCGCCGACAAGAATTCTGACCGCC
GACTCTCACTTGGGCAGCAAGTATTTGCGATTCTCGGCAACATTCTCGGA
AATGCAAACTACCGATTAGCACATATATCGTCAATGGTGCATGCTGAGAT
GACTCGCGAAGACTTTGGGCAAAAATTCGACTACATACTGAACACAATTG
ACCGGAATGACAAAGAGACAGCATTTCTTGATACATCAAAAGCATGGAAA
GAGCTTATGCTCAAATCGCATGCAAAGAGGCAATCCTTCGATGGATACTG
GCAAGAGTATAGTAGTCTCTGTACTCAGTACGCATATGCGCATGGAGAAG
TGGCGCAGTGA
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protein sequence of Ggra10894.t1

>Ggra10894.t1 ID=Ggra10894.t1|Name=Ggra10894.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=137bp
MPVYDEGVDVRAYRRAVIDWIELQDFADKNSDRRLSLGQQVFAILGNILG
NANYRLAHISSMVHAEMTREDFGQKFDYILNTIDRNDKETAFLDTSKAWK
ELMLKSHAKRQSFDGYWQEYSSLCTQYAYAHGEVAQ*
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mRNA from alignment at tig00000098_pilon:36110..36520-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10894.t1 ID=Ggra10894.t1|Name=Ggra10894.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=411bp|location=Sequence derived from alignment at tig00000098_pilon:36110..36520- (Gracilaria gracilis GNS1m male)
ATGCCAGTCTATGATGAAGGAGTGGATGTTAGGGCCTACAGAAGAGCTGT
AATCGACTGGATTGAGTTGCAAGATTTCGCCGACAAGAATTCTGACCGCC
GACTCTCACTTGGGCAGCAAGTATTTGCGATTCTCGGCAACATTCTCGGA
AATGCAAACTACCGATTAGCACATATATCGTCAATGGTGCATGCTGAGAT
GACTCGCGAAGACTTTGGGCAAAAATTCGACTACATACTGAACACAATTG
ACCGGAATGACAAAGAGACAGCATTTCTTGATACATCAAAAGCATGGAAA
GAGCTTATGCTCAAATCGCATGCAAAGAGGCAATCCTTCGATGGATACTG
GCAAGAGTATAGTAGTCTCTGTACTCAGTACGCATATGCGCATGGAGAAG
TGGCGCAGTGA
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Coding sequence (CDS) from alignment at tig00000098_pilon:36110..36520-

>Ggra10894.t1 ID=Ggra10894.t1|Name=Ggra10894.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=411bp|location=Sequence derived from alignment at tig00000098_pilon:36110..36520- (Gracilaria gracilis GNS1m male)
ATGCCAGTCTATGATGAAGGAGTGGATGTTAGGGCCTACAGAAGAGCTGT
AATCGACTGGATTGAGTTGCAAGATTTCGCCGACAAGAATTCTGACCGCC
GACTCTCACTTGGGCAGCAAGTATTTGCGATTCTCGGCAACATTCTCGGA
AATGCAAACTACCGATTAGCACATATATCGTCAATGGTGCATGCTGAGAT
GACTCGCGAAGACTTTGGGCAAAAATTCGACTACATACTGAACACAATTG
ACCGGAATGACAAAGAGACAGCATTTCTTGATACATCAAAAGCATGGAAA
GAGCTTATGCTCAAATCGCATGCAAAGAGGCAATCCTTCGATGGATACTG
GCAAGAGTATAGTAGTCTCTGTACTCAGTACGCATATGCGCATGGAGAAG
TGGCGCAGTGA
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