Ggra6345.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6345.t1
Unique NameGgra6345.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length376
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:285314..286441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6345Ggra6345Gracilaria gracilis GNS1m malegenetig00000096_pilon 285314..286441 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6345.t1.stop1Ggra6345.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000096_pilon 285314..285316 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6345.t1.CDS1Ggra6345.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000096_pilon 285314..286441 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6345.t1.exon1Ggra6345.t1.exon1Gracilaria gracilis GNS1m maleexontig00000096_pilon 285314..286441 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6345.t1.start1Ggra6345.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000096_pilon 286439..286441 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6345.t1Ggra6345.t1Gracilaria gracilis GNS1m malepolypeptidetig00000096_pilon 285314..286441 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6345.t1 ID=Ggra6345.t1|Name=Ggra6345.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=376bp
MGRSRSKTRVKKAILKQQKIKVSYPITLPFITEEELDAGGPTVGDQETMS
NPEEELDAGGPTVGDQETMSNPAATHDIVCDEDNDEWIINQLMVGDGTKL
PNGTHFHKNKIYACGNAHGNLESFYAVDEESLGLQYGTGRYLNVQGKYVT
ESGKQKHGAGYKVVRLDTEILHDDGSAGMTDNCLRYLKKHPGFSIRLNFP
GQRSICRDSEAFWMRHLGATYVTGQKHNCLVAACVNVVHSAIMWNSKSEV
QAQIAARHARTCLGQHEMPLYTVASLTPVFHSMKLGLDMKKVSKELYDID
NLVLMKAEKFFLVRIFVKKQTDHVVAIDYGRRCIIDNYERFPLQLSTDGM
AIASGGKGKKAKAIEVREVFFTKNG*
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spliced messenger RNA

>Ggra6345.t1 ID=Ggra6345.t1|Name=Ggra6345.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1128bp|location=Sequence derived from alignment at tig00000096_pilon:285314..286441- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGAGATCTCGAAGTAAGACGAGAGTTAAGAAAGCTATTTTAAAACA
GCAGAAGATCAAAGTCTCTTACCCGATCACTCTTCCATTTATTACTGAAG
AAGAATTGGACGCCGGAGGCCCGACCGTGGGTGATCAAGAAACCATGAGC
AACCCAGAAGAGGAATTGGACGCCGGAGGCCCGACCGTGGGTGACCAAGA
AACCATGAGCAACCCAGCCGCAACGCACGACATTGTCTGTGATGAAGATA
ATGATGAATGGATCATCAACCAACTTATGGTTGGTGATGGAACTAAACTA
CCAAATGGTACACACTTCCACAAAAACAAAATATATGCGTGCGGAAACGC
TCACGGCAACCTGGAATCTTTTTATGCTGTCGATGAGGAAAGTTTGGGTC
TCCAGTATGGAACCGGTAGATATTTGAATGTTCAAGGAAAATATGTGACT
GAGTCGGGTAAACAAAAACATGGAGCGGGATATAAAGTTGTCAGATTGGA
CACAGAGATTTTGCATGACGACGGTTCTGCAGGTATGACTGATAACTGCC
TTCGATATCTAAAGAAGCACCCGGGATTTAGCATTCGTCTCAACTTCCCC
GGTCAAAGGTCAATTTGCCGCGACTCAGAGGCTTTTTGGATGAGGCACTT
GGGTGCAACCTACGTTACTGGTCAAAAACACAACTGTCTTGTAGCTGCTT
GTGTGAACGTGGTACATAGCGCTATCATGTGGAATTCTAAATCTGAAGTG
CAAGCACAAATTGCGGCTCGACACGCTCGCACATGTTTGGGGCAGCATGA
AATGCCGCTTTATACTGTTGCATCTTTAACGCCCGTTTTTCACAGTATGA
AGTTGGGACTGGATATGAAGAAAGTGTCAAAGGAATTGTATGATATTGAC
AATTTGGTTTTGATGAAAGCGGAGAAGTTTTTTCTTGTTAGGATTTTTGT
GAAGAAACAAACTGACCACGTCGTTGCAATTGACTATGGAAGAAGATGCA
TCATTGATAACTATGAAAGGTTTCCTCTGCAGCTTTCTACGGATGGGATG
GCGATTGCGAGTGGGGGAAAAGGAAAGAAAGCTAAAGCGATAGAAGTACG
AGAAGTTTTCTTCACGAAAAATGGCTAA
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protein sequence of Ggra6345.t1

>Ggra6345.t1 ID=Ggra6345.t1|Name=Ggra6345.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=376bp
MGRSRSKTRVKKAILKQQKIKVSYPITLPFITEEELDAGGPTVGDQETMS
NPEEELDAGGPTVGDQETMSNPAATHDIVCDEDNDEWIINQLMVGDGTKL
PNGTHFHKNKIYACGNAHGNLESFYAVDEESLGLQYGTGRYLNVQGKYVT
ESGKQKHGAGYKVVRLDTEILHDDGSAGMTDNCLRYLKKHPGFSIRLNFP
GQRSICRDSEAFWMRHLGATYVTGQKHNCLVAACVNVVHSAIMWNSKSEV
QAQIAARHARTCLGQHEMPLYTVASLTPVFHSMKLGLDMKKVSKELYDID
NLVLMKAEKFFLVRIFVKKQTDHVVAIDYGRRCIIDNYERFPLQLSTDGM
AIASGGKGKKAKAIEVREVFFTKNG*
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mRNA from alignment at tig00000096_pilon:285314..286441-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6345.t1 ID=Ggra6345.t1|Name=Ggra6345.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1128bp|location=Sequence derived from alignment at tig00000096_pilon:285314..286441- (Gracilaria gracilis GNS1m male)
ATGGGGAGATCTCGAAGTAAGACGAGAGTTAAGAAAGCTATTTTAAAACA
GCAGAAGATCAAAGTCTCTTACCCGATCACTCTTCCATTTATTACTGAAG
AAGAATTGGACGCCGGAGGCCCGACCGTGGGTGATCAAGAAACCATGAGC
AACCCAGAAGAGGAATTGGACGCCGGAGGCCCGACCGTGGGTGACCAAGA
AACCATGAGCAACCCAGCCGCAACGCACGACATTGTCTGTGATGAAGATA
ATGATGAATGGATCATCAACCAACTTATGGTTGGTGATGGAACTAAACTA
CCAAATGGTACACACTTCCACAAAAACAAAATATATGCGTGCGGAAACGC
TCACGGCAACCTGGAATCTTTTTATGCTGTCGATGAGGAAAGTTTGGGTC
TCCAGTATGGAACCGGTAGATATTTGAATGTTCAAGGAAAATATGTGACT
GAGTCGGGTAAACAAAAACATGGAGCGGGATATAAAGTTGTCAGATTGGA
CACAGAGATTTTGCATGACGACGGTTCTGCAGGTATGACTGATAACTGCC
TTCGATATCTAAAGAAGCACCCGGGATTTAGCATTCGTCTCAACTTCCCC
GGTCAAAGGTCAATTTGCCGCGACTCAGAGGCTTTTTGGATGAGGCACTT
GGGTGCAACCTACGTTACTGGTCAAAAACACAACTGTCTTGTAGCTGCTT
GTGTGAACGTGGTACATAGCGCTATCATGTGGAATTCTAAATCTGAAGTG
CAAGCACAAATTGCGGCTCGACACGCTCGCACATGTTTGGGGCAGCATGA
AATGCCGCTTTATACTGTTGCATCTTTAACGCCCGTTTTTCACAGTATGA
AGTTGGGACTGGATATGAAGAAAGTGTCAAAGGAATTGTATGATATTGAC
AATTTGGTTTTGATGAAAGCGGAGAAGTTTTTTCTTGTTAGGATTTTTGT
GAAGAAACAAACTGACCACGTCGTTGCAATTGACTATGGAAGAAGATGCA
TCATTGATAACTATGAAAGGTTTCCTCTGCAGCTTTCTACGGATGGGATG
GCGATTGCGAGTGGGGGAAAAGGAAAGAAAGCTAAAGCGATAGAAGTACG
AGAAGTTTTCTTCACGAAAAATGGCTAA
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Coding sequence (CDS) from alignment at tig00000096_pilon:285314..286441-

>Ggra6345.t1 ID=Ggra6345.t1|Name=Ggra6345.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1128bp|location=Sequence derived from alignment at tig00000096_pilon:285314..286441- (Gracilaria gracilis GNS1m male)
ATGGGGAGATCTCGAAGTAAGACGAGAGTTAAGAAAGCTATTTTAAAACA
GCAGAAGATCAAAGTCTCTTACCCGATCACTCTTCCATTTATTACTGAAG
AAGAATTGGACGCCGGAGGCCCGACCGTGGGTGATCAAGAAACCATGAGC
AACCCAGAAGAGGAATTGGACGCCGGAGGCCCGACCGTGGGTGACCAAGA
AACCATGAGCAACCCAGCCGCAACGCACGACATTGTCTGTGATGAAGATA
ATGATGAATGGATCATCAACCAACTTATGGTTGGTGATGGAACTAAACTA
CCAAATGGTACACACTTCCACAAAAACAAAATATATGCGTGCGGAAACGC
TCACGGCAACCTGGAATCTTTTTATGCTGTCGATGAGGAAAGTTTGGGTC
TCCAGTATGGAACCGGTAGATATTTGAATGTTCAAGGAAAATATGTGACT
GAGTCGGGTAAACAAAAACATGGAGCGGGATATAAAGTTGTCAGATTGGA
CACAGAGATTTTGCATGACGACGGTTCTGCAGGTATGACTGATAACTGCC
TTCGATATCTAAAGAAGCACCCGGGATTTAGCATTCGTCTCAACTTCCCC
GGTCAAAGGTCAATTTGCCGCGACTCAGAGGCTTTTTGGATGAGGCACTT
GGGTGCAACCTACGTTACTGGTCAAAAACACAACTGTCTTGTAGCTGCTT
GTGTGAACGTGGTACATAGCGCTATCATGTGGAATTCTAAATCTGAAGTG
CAAGCACAAATTGCGGCTCGACACGCTCGCACATGTTTGGGGCAGCATGA
AATGCCGCTTTATACTGTTGCATCTTTAACGCCCGTTTTTCACAGTATGA
AGTTGGGACTGGATATGAAGAAAGTGTCAAAGGAATTGTATGATATTGAC
AATTTGGTTTTGATGAAAGCGGAGAAGTTTTTTCTTGTTAGGATTTTTGT
GAAGAAACAAACTGACCACGTCGTTGCAATTGACTATGGAAGAAGATGCA
TCATTGATAACTATGAAAGGTTTCCTCTGCAGCTTTCTACGGATGGGATG
GCGATTGCGAGTGGGGGAAAAGGAAAGAAAGCTAAAGCGATAGAAGTACG
AGAAGTTTTCTTCACGAAAAATGGCTAA
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